Genomic map of Staphylococcus phage BP39 (NC_031046)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031046
Definition
Staphylococcus phage BP39, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus BP39.
DB of origin
REFSEQ
Length
17641
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
20
%GC
29.01
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009283980.1 NC_031046_p5 hypothetical protein phrog_7019 unknown function unknown function 1 1511 1690
YP_009283981.1 NC_031046_p6 hypothetical protein phrog_7529 unknown function unknown function 1 1693 2094
YP_009283977.1 NC_031046_p2 hypothetical protein phrog_6274 unknown function unknown function 1 512 814
YP_009283985.1 NC_031046_p10 hypothetical protein phrog_5979 unknown function unknown function -1 6451 7890
YP_009283976.1 NC_031046_p1 hypothetical protein singleton unknown function unknown function 1 314 478
YP_009283995.1 NC_031046_p20 hypothetical protein phrog_7102 unknown function unknown function -1 16977 17363
YP_009283994.1 NC_031046_p19 hypothetical protein phrog_6289 unknown function unknown function -1 16782 16964
YP_009283986.1 NC_031046_p11 holin phrog_199 holin lysis -1 7865 8287
YP_009283987.1 NC_031046_p12 tail protein phrog_2248 tail protein tail -1 8288 10063
YP_009283984.1 NC_031046_p9 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 4053 6341
YP_009283978.1 NC_031046_p3 hypothetical protein phrog_6346 unknown function unknown function 1 832 1068
YP_009283982.1 NC_031046_p7 hypothetical protein phrog_6099 unknown function unknown function 1 2260 2742
YP_009283983.1 NC_031046_p8 DNA encapsidation protein phrog_2150 terminase head and packaging 1 2790 4037
YP_009283989.1 NC_031046_p14 N-acetylmuramoyl-L-alanine amidase phrog_635 endolysin lysis -1 11100 11861
YP_009283990.1 NC_031046_p15 hypothetical protein phrog_287 minor tail protein tail -1 11877 13799
YP_009283993.1 NC_031046_p18 major capsid protein phrog_2006 major head protein head and packaging -1 15554 16774
YP_009283991.1 NC_031046_p16 lower collar protein phrog_3225 adaptor Ad4 connector -1 13812 14567
YP_009283992.1 NC_031046_p17 upper collar protein phrog_2038 upper collar connector connector -1 14560 15543
YP_009283979.1 NC_031046_p4 single stranded DNA-binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 1092 1460
YP_009283988.1 NC_031046_p13 tail protein phrog_9604 tail protein tail -1 10108 11037