| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031050 |
Definition |
Enterobacteria phage vB_EcoS_NBD2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Vilniusvirus; Escherichia virus NBD2. |
DB of origin |
REFSEQ |
Length |
51802 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
87 |
%GC |
49.81 |
Number of singletons |
21 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009284677.1 | NC_031050_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31144 | 31326 |
| YP_009284682.1 | NC_031050_p58 | DNA primase/helicase | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 36028 | 36954 |
| YP_009284637.1 | NC_031050_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4372 | 5004 |
| YP_009284665.1 | NC_031050_p41 | hypothetical protein | phrog_680 | tail length tape measure protein | tail | 1 | 20185 | 20484 |
| YP_009284631.1 | NC_031050_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2689 | 2952 |
| YP_009284661.1 | NC_031050_p37 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 18244 | 18687 |
| YP_009284644.1 | NC_031050_p20 | hypothetical protein | phrog_34194 | unknown function | unknown function | 1 | 7712 | 8218 |
| YP_009284701.1 | NC_031050_p77 | hypothetical protein | phrog_4448 | unknown function | unknown function | -1 | 48217 | 48438 |
| YP_009284699.1 | NC_031050_p75 | hypothetical protein | phrog_2684 | unknown function | unknown function | -1 | 46933 | 47436 |
| YP_009284668.1 | NC_031050_p44 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 23583 | 24374 |
| YP_009284630.1 | NC_031050_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2024 | 2557 |
| YP_009284628.1 | NC_031050_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1351 | 1590 |
| YP_009284664.1 | NC_031050_p40 | tape measure chaperone protein | phrog_569 | tail length tape measure protein | tail | 1 | 19853 | 20167 |
| YP_009284625.1 | NC_031050_p1 | hypothetical protein | phrog_4841 | unknown function | unknown function | 1 | 37 | 576 |
| YP_009284681.1 | NC_031050_p57 | tail fiber protein | phrog_5481 | tail fiber protein | tail | -1 | 33636 | 35933 |
| YP_009284655.1 | NC_031050_p31 | major head subunit precursor | phrog_530 | head maturation protease | head and packaging | 1 | 14226 | 15374 |
| YP_009284633.1 | NC_031050_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3237 | 3620 |
| YP_009284700.1 | NC_031050_p76 | C-5 cytosine DNA methylase | phrog_757 | DNA methyltransferase | other | -1 | 47531 | 48220 |
| YP_009284697.1 | NC_031050_p73 | hypothetical protein | phrog_2794 | unknown function | unknown function | -1 | 44912 | 45262 |
| YP_009284651.1 | NC_031050_p27 | terminase small subunit | phrog_606 | terminase small subunit | head and packaging | 1 | 9986 | 10567 |
| YP_009284686.1 | NC_031050_p62 | DNA adenine methyltransferase | phrog_111 | DNA methyltransferase | other | 1 | 40148 | 40876 |
| YP_009284679.1 | NC_031050_p55 | recombination protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32410 | 33087 |
| YP_009284656.1 | NC_031050_p32 | hypothetical protein | phrog_1989 | unknown function | unknown function | 1 | 15434 | 15967 |
| YP_009284669.1 | NC_031050_p45 | minor tail protein | phrog_30 | minor tail protein | tail | 1 | 24371 | 25093 |
| YP_009284662.1 | NC_031050_p38 | structural protein | phrog_179 | tail terminator | connector | 1 | 18674 | 19102 |
| YP_009284711.1 | NC_031050_p87 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51555 | 51773 |
| YP_009284687.1 | NC_031050_p63 | hypothetical protein | phrog_2676 | unknown function | unknown function | 1 | 40878 | 41108 |
| YP_009284695.1 | NC_031050_p71 | hypothetical protein | phrog_1804 | Rz-like spanin | lysis | 1 | 44316 | 44735 |
| YP_009284689.1 | NC_031050_p65 | hypothetical protein | phrog_2817 | unknown function | unknown function | 1 | 41428 | 41664 |
| YP_009284705.1 | NC_031050_p81 | hypothetical protein | phrog_1254 | unknown function | unknown function | -1 | 49578 | 49856 |
| YP_009284643.1 | NC_031050_p19 | hypothetical protein | phrog_8758 | unknown function | unknown function | 1 | 7254 | 7715 |
| YP_009284626.1 | NC_031050_p2 | hypothetical protein | phrog_2010 | unknown function | unknown function | 1 | 573 | 779 |
| YP_009284639.1 | NC_031050_p15 | ATP-binding protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 5708 | 6325 |
| YP_009284658.1 | NC_031050_p34 | hypothetical protein | phrog_2716 | unknown function | unknown function | 1 | 17151 | 17417 |
| YP_009284690.1 | NC_031050_p66 | hypothetical protein | phrog_4596 | unknown function | unknown function | 1 | 41661 | 41918 |
| YP_009284680.1 | NC_031050_p56 | ssDNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 33131 | 33598 |
| YP_009284663.1 | NC_031050_p39 | major tail protein | phrog_584 | major tail protein | tail | 1 | 19104 | 19778 |
| YP_009284698.1 | NC_031050_p74 | helicase | phrog_2373 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 45267 | 46859 |
| YP_009284704.1 | NC_031050_p80 | hypothetical protein | phrog_5016 | unknown function | unknown function | -1 | 49332 | 49568 |
| YP_009284634.1 | NC_031050_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3623 | 3901 |
| YP_009284629.1 | NC_031050_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1681 | 1920 |
| YP_009284649.1 | NC_031050_p25 | hypothetical protein | phrog_2919 | unknown function | unknown function | 1 | 9528 | 9713 |
| YP_009284707.1 | NC_031050_p83 | hypothetical protein | singleton | unknown function | unknown function | -1 | 50177 | 50422 |
| YP_009284667.1 | NC_031050_p43 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 23220 | 23567 |
| YP_009284672.1 | NC_031050_p48 | hypothetical protein | phrog_25729 | unknown function | unknown function | -1 | 29400 | 29732 |
| YP_009284650.1 | NC_031050_p26 | hypothetical protein | phrog_5976 | unknown function | unknown function | 1 | 9710 | 9937 |
| YP_009284675.1 | NC_031050_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30796 | 30939 |
| YP_009284632.1 | NC_031050_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2987 | 3274 |
| YP_009284647.1 | NC_031050_p23 | hypothetical protein | phrog_303 | unknown function | unknown function | 1 | 8823 | 9056 |
| YP_009284684.1 | NC_031050_p60 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 37586 | 39661 |
| YP_009284657.1 | NC_031050_p33 | major capsid protein | phrog_264 | major head protein | head and packaging | 1 | 16088 | 17041 |
| YP_009284642.1 | NC_031050_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6905 | 7183 |
| YP_009284671.1 | NC_031050_p47 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 25767 | 29369 |
| YP_009284673.1 | NC_031050_p49 | hypothetical protein | phrog_4524 | unknown function | unknown function | -1 | 29807 | 30460 |
| YP_009284692.1 | NC_031050_p68 | hypothetical protein | phrog_4788 | unknown function | unknown function | 1 | 43314 | 43490 |
| YP_009284688.1 | NC_031050_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41180 | 41434 |
| YP_009284660.1 | NC_031050_p36 | virion structural protein | phrog_161 | head closure Hc1 | connector | 1 | 17877 | 18251 |
| YP_009284645.1 | NC_031050_p21 | hypothetical protein | phrog_5684 | unknown function | unknown function | 1 | 8290 | 8520 |
| YP_009284636.1 | NC_031050_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4133 | 4339 |
| YP_009284652.1 | NC_031050_p28 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 10564 | 12150 |
| YP_009284696.1 | NC_031050_p72 | hypothetical protein | phrog_9539 | unknown function | unknown function | -1 | 44749 | 44946 |
| YP_009284635.1 | NC_031050_p11 | hypothetical protein | phrog_37078 | unknown function | unknown function | 1 | 3889 | 4131 |
| YP_009284678.1 | NC_031050_p54 | exodeoxyribonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 31277 | 32335 |
| YP_009284683.1 | NC_031050_p59 | transcriptional regulator | phrog_2856 | transcriptional regulator | transcription regulation | -1 | 37018 | 37494 |
| YP_009284648.1 | NC_031050_p24 | hypothetical protein | phrog_4927 | unknown function | unknown function | 1 | 9056 | 9262 |
| YP_009284703.1 | NC_031050_p79 | hypothetical protein | phrog_4344 | unknown function | unknown function | -1 | 49033 | 49260 |
| YP_009284710.1 | NC_031050_p86 | hypothetical protein | singleton | unknown function | unknown function | -1 | 50932 | 51168 |
| YP_009284691.1 | NC_031050_p67 | phosphoesterase | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41990 | 43147 |
| YP_009284654.1 | NC_031050_p30 | head morphogenesis protein | phrog_324 | head morphogenesis | head and packaging | 1 | 13501 | 14256 |
| YP_009284702.1 | NC_031050_p78 | hypothetical protein | phrog_9323 | unknown function | unknown function | -1 | 48449 | 48682 |
| YP_009284627.1 | NC_031050_p3 | hypothetical protein | phrog_19692 | unknown function | unknown function | 1 | 818 | 1294 |
| YP_009284708.1 | NC_031050_p84 | hypothetical protein | singleton | unknown function | unknown function | -1 | 50419 | 50670 |
| YP_009284641.1 | NC_031050_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6625 | 6915 |
| YP_009284646.1 | NC_031050_p22 | hypothetical protein | phrog_11192 | unknown function | unknown function | 1 | 8517 | 8822 |
| YP_009284694.1 | NC_031050_p70 | lysozyme | phrog_7 | endolysin | lysis | 1 | 43828 | 44319 |
| YP_009284653.1 | NC_031050_p29 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 12201 | 13523 |
| YP_009284640.1 | NC_031050_p16 | hypothetical protein | phrog_27558 | unknown function | unknown function | 1 | 6401 | 6625 |
| YP_009284676.1 | NC_031050_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31001 | 31147 |
| YP_009284638.1 | NC_031050_p14 | polynucleotide kinase/phosphatase | phrog_415 | polynucleotide kinase | other | 1 | 5076 | 5705 |
| YP_009284670.1 | NC_031050_p46 | tail assembly protein | phrog_32 | tail assembly protein | tail | 1 | 25090 | 25689 |
| YP_009284659.1 | NC_031050_p35 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 17470 | 17880 |
| YP_009284685.1 | NC_031050_p61 | endonuclease | phrog_824 | unknown function | unknown function | 1 | 39658 | 40077 |
| YP_009284709.1 | NC_031050_p85 | hypothetical protein | singleton | unknown function | unknown function | -1 | 50667 | 50927 |
| YP_009284693.1 | NC_031050_p69 | holin | phrog_2877 | holin | lysis | 1 | 43616 | 43831 |
| YP_009284706.1 | NC_031050_p82 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49992 | 50180 |
| YP_009284666.1 | NC_031050_p42 | tail tape-measure protein | phrog_24 | tail length tape measure protein | tail | 1 | 20518 | 23217 |
| YP_009284674.1 | NC_031050_p50 | hypothetical protein | phrog_7961 | unknown function | unknown function | -1 | 30469 | 30777 |