Genomic map of Rhodovulum phage vB_RhkS_P1 (NC_031059)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031059
Definition
Rhodovulum phage vB_RhkS_P1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
38773
Host Name
Rhodovulum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
67.45
Number of singletons
22
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009285904.1 NC_031059_p19 protein of unknown function DUF1018 phrog_286 unknown function unknown function 1 10329 10784
YP_009285943.1 NC_031059_p58 hypothetical protein singleton unknown function unknown function -1 37911 38033
YP_009285915.1 NC_031059_p30 hypothetical protein phrog_27524 unknown function unknown function 1 14066 14419
YP_009285933.1 NC_031059_p48 hypothetical protein phrog_384 virion structural protein head and packaging 1 27232 27588
YP_009285902.1 NC_031059_p17 hypothetical protein singleton unknown function unknown function 1 9990 10190
YP_009285931.1 NC_031059_p46 hypothetical protein singleton unknown function unknown function 1 25007 25303
YP_009285922.1 NC_031059_p37 hypothetical protein phrog_328 head maturation protease head and packaging 1 19599 20627
YP_009285887.1 NC_031059_p2 hypothetical protein phrog_4 transcriptional repressor transcription regulation -1 1091 1717
YP_009285938.1 NC_031059_p53 hypothetical protein singleton unknown function unknown function 1 34345 34782
YP_009285889.1 NC_031059_p4 hypothetical protein singleton unknown function unknown function -1 2563 3060
YP_009285909.1 NC_031059_p24 hypothetical protein singleton unknown function unknown function 1 12226 12435
YP_009285900.1 NC_031059_p15 hypothetical protein phrog_19497 unknown function unknown function 1 9092 9316
YP_009285903.1 NC_031059_p18 hypothetical protein singleton unknown function unknown function 1 10192 10332
YP_009285911.1 NC_031059_p26 hypothetical protein phrog_436 unknown function unknown function 1 12844 13146
YP_009285908.1 NC_031059_p23 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis 1 11735 12229
YP_009285914.1 NC_031059_p29 hypothetical protein singleton unknown function unknown function 1 13879 14061
YP_009285927.1 NC_031059_p42 virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 22653 23159
YP_009285912.1 NC_031059_p27 hypothetical protein phrog_426 terminase small subunit head and packaging 1 13152 13688
YP_009285897.1 NC_031059_p12 hypothetical protein phrog_2030 transcriptional regulator transcription regulation 1 7776 8357
YP_009285895.1 NC_031059_p10 mobile element protein phrog_310 transposase integration and excision 1 4819 6960
YP_009285901.1 NC_031059_p16 hypothetical protein phrog_846 unknown function unknown function 1 9313 9978
YP_009285944.1 NC_031059_p59 hypothetical protein singleton unknown function unknown function -1 38193 38714
YP_009285937.1 NC_031059_p52 hypothetical protein singleton unknown function unknown function 1 33962 34348
YP_009285888.1 NC_031059_p3 hypothetical protein phrog_7669 unknown function unknown function 1 1888 2148
YP_009285935.1 NC_031059_p50 tail assembly protein phrog_329 minor tail protein tail 1 28058 28438
YP_009285923.1 NC_031059_p38 hypothetical protein phrog_1731 virion structural protein head and packaging 1 20629 21018
YP_009285928.1 NC_031059_p43 hypothetical protein phrog_209 portal protein head and packaging 1 23156 23602
YP_009285913.1 NC_031059_p28 hypothetical protein singleton unknown function unknown function 1 13688 13879
YP_009285916.1 NC_031059_p31 hypothetical protein phrog_15183 unknown function unknown function 1 14424 14738
YP_009285896.1 NC_031059_p11 mobile element protein phrog_296 DNA transposition protein integration and excision 1 7033 7779
YP_009285906.1 NC_031059_p21 hypothetical protein phrog_8252 unknown function unknown function 1 10990 11232
YP_009285941.1 NC_031059_p56 hypothetical protein singleton unknown function unknown function 1 36980 37387
YP_009285936.1 NC_031059_p51 tail component phrog_31 central tail fiber J tail 1 28428 33965
YP_009285917.1 NC_031059_p32 hypothetical protein singleton unknown function unknown function 1 14735 14971
YP_009285940.1 NC_031059_p55 hypothetical protein phrog_19495 unknown function unknown function 1 35148 36983
YP_009285898.1 NC_031059_p13 hypothetical protein phrog_2119 unknown function unknown function 1 8354 8734
YP_009285905.1 NC_031059_p20 hypothetical protein singleton unknown function unknown function 1 10781 10993
YP_009285919.1 NC_031059_p34 hypothetical protein phrog_113 portal protein head and packaging 1 16373 17926
YP_009285934.1 NC_031059_p49 hypothetical protein phrog_396 minor tail protein tail 1 27585 28061
YP_009285899.1 NC_031059_p14 hypothetical protein singleton unknown function unknown function 1 8734 9099
YP_009285890.1 NC_031059_p5 hypothetical protein singleton unknown function unknown function 1 3059 3256
YP_009285942.1 NC_031059_p57 hypothetical protein singleton unknown function unknown function -1 37517 37921
YP_009285921.1 NC_031059_p36 hypothetical protein singleton unknown function unknown function 1 19236 19421
YP_009285892.1 NC_031059_p7 hypothetical protein phrog_35777 unknown function unknown function 1 3530 3760
YP_009285893.1 NC_031059_p8 hypothetical protein singleton unknown function unknown function 1 3753 3977
YP_009285891.1 NC_031059_p6 hypothetical protein phrog_13335 unknown function unknown function 1 3253 3525
YP_009285939.1 NC_031059_p54 hypothetical protein singleton unknown function unknown function 1 34825 35094
YP_009285924.1 NC_031059_p39 major capsid protein phrog_371 major head protein head and packaging 1 21030 21926
YP_009285907.1 NC_031059_p22 hypothetical protein phrog_836 late transcriptional activator transcription regulation 1 11237 11650
YP_009285932.1 NC_031059_p47 tail protein phrog_1538 tail length tape measure protein tail 1 25300 27231
YP_009285886.1 NC_031059_p1 hypothetical protein singleton unknown function unknown function -1 651 1079
YP_009285918.1 NC_031059_p33 terminase large subunit phrog_2 terminase large subunit head and packaging 1 14964 16373
YP_009285929.1 NC_031059_p44 hypothetical protein phrog_290 minor tail protein tail 1 23610 24539
YP_009285910.1 NC_031059_p25 hypothetical protein phrog_736 unknown function unknown function 1 12437 12847
YP_009285926.1 NC_031059_p41 protein of unknown function DUF1320 phrog_195 head-tail adaptor connector 1 22223 22651
YP_009285930.1 NC_031059_p45 hypothetical protein phrog_569 tail length tape measure protein tail 1 24552 24944
YP_009285920.1 NC_031059_p35 virion morphogenesis protein phrog_220 minor head protein and DNA pilot head and packaging 1 17926 19239
YP_009285894.1 NC_031059_p9 ParB-like nuclease domain protein phrog_3264 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 3974 4822
YP_009285925.1 NC_031059_p40 hypothetical protein singleton unknown function unknown function 1 21985 22218