| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031063 |
Definition |
Pseudomonas phage PEV2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus. |
DB of origin |
REFSEQ |
Length |
72697 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
93 |
%GC |
54.86 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009286243.1 | NC_031063_p22 | hypothetical protein | phrog_8144 | unknown function | unknown function | 1 | 7444 | 7716 |
| YP_009286292.1 | NC_031063_p71 | hypothetical protein | phrog_8394 | unknown function | unknown function | 1 | 43846 | 44082 |
| YP_009286269.1 | NC_031063_p48 | hypothetical protein | phrog_8307 | unknown function | unknown function | 1 | 27273 | 27464 |
| YP_009286265.1 | NC_031063_p44 | hypothetical protein | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 22244 | 24760 |
| YP_009286246.1 | NC_031063_p25 | hypothetical protein | phrog_6140 | unknown function | unknown function | 1 | 9315 | 9539 |
| YP_009286294.1 | NC_031063_p73 | hypothetical protein | phrog_8152 | unknown function | unknown function | 1 | 44406 | 44609 |
| YP_009286288.1 | NC_031063_p67 | hypothetical protein | phrog_7564 | unknown function | unknown function | 1 | 42538 | 42978 |
| YP_009286275.1 | NC_031063_p54 | tail fiber protein | phrog_7697 | tail fiber protein | tail | -1 | 29656 | 32928 |
| YP_009286229.1 | NC_031063_p8 | hypothetical protein | phrog_8477 | unknown function | unknown function | 1 | 2373 | 2600 |
| YP_009286227.1 | NC_031063_p6 | hypothetical protein | phrog_2614 | unknown function | unknown function | 1 | 1781 | 2089 |
| YP_009286258.1 | NC_031063_p37 | hypothetical protein | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 16349 | 17686 |
| YP_009286301.1 | NC_031063_p80 | hypothetical protein | phrog_1357 | major head protein | head and packaging | -1 | 60807 | 62006 |
| YP_009286278.1 | NC_031063_p57 | tail protein | phrog_496 | tail fiber protein | tail | -1 | 33931 | 35220 |
| YP_009286268.1 | NC_031063_p47 | hypothetical protein | phrog_6854 | holin | lysis | 1 | 26906 | 27223 |
| YP_009286231.1 | NC_031063_p10 | hypothetical protein | phrog_8334 | unknown function | unknown function | 1 | 2812 | 3045 |
| YP_009286226.1 | NC_031063_p5 | hypothetical protein | phrog_7875 | unknown function | unknown function | 1 | 1526 | 1777 |
| YP_009286266.1 | NC_031063_p45 | hypothetical protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 24772 | 26550 |
| YP_009286311.1 | NC_031063_p90 | hypothetical protein | phrog_8800 | unknown function | unknown function | 1 | 70215 | 70427 |
| YP_009286280.1 | NC_031063_p59 | hypothetical protein | phrog_2452 | unknown function | unknown function | 1 | 36038 | 36418 |
| YP_009286232.1 | NC_031063_p11 | hypothetical protein | phrog_8895 | unknown function | unknown function | 1 | 3042 | 3263 |
| YP_009286247.1 | NC_031063_p26 | hypothetical protein | phrog_7111 | unknown function | unknown function | 1 | 9543 | 10169 |
| YP_009286253.1 | NC_031063_p32 | ATP dependent protease ATP-binding subunit | phrog_5534 | unknown function | unknown function | 1 | 12500 | 13333 |
| YP_009286264.1 | NC_031063_p43 | hypothetical protein | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 21896 | 22240 |
| YP_009286222.1 | NC_031063_p1 | hypothetical protein | phrog_6483 | unknown function | unknown function | 1 | 200 | 454 |
| YP_009286239.1 | NC_031063_p18 | hypothetical protein | phrog_8585 | unknown function | unknown function | 1 | 5557 | 5904 |
| YP_009286309.1 | NC_031063_p88 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 68992 | 69717 |
| YP_009286244.1 | NC_031063_p23 | RNAP2 | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 7751 | 8992 |
| YP_009286237.1 | NC_031063_p16 | hypothetical protein | phrog_7756 | unknown function | unknown function | 1 | 4826 | 5077 |
| YP_009286282.1 | NC_031063_p61 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 37445 | 39619 |
| YP_009286270.1 | NC_031063_p49 | hypothetical protein | phrog_8796 | unknown function | unknown function | 1 | 27457 | 28014 |
| YP_009286314.1 | NC_031063_p93 | hypothetical protein | phrog_8657 | unknown function | unknown function | 1 | 71187 | 71837 |
| YP_009286263.1 | NC_031063_p42 | hypothetical protein | phrog_8620 | unknown function | unknown function | 1 | 21654 | 22052 |
| YP_009286240.1 | NC_031063_p19 | RNA polymerase 1 | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5916 | 6848 |
| YP_009286285.1 | NC_031063_p64 | hypothetical protein | phrog_6026 | unknown function | unknown function | 1 | 41173 | 41538 |
| YP_009286305.1 | NC_031063_p84 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 65854 | 66273 |
| YP_009286295.1 | NC_031063_p74 | RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 44625 | 54821 |
| YP_009286262.1 | NC_031063_p41 | hypothetical protein | phrog_10189 | unknown function | unknown function | 1 | 21511 | 21651 |
| YP_009286312.1 | NC_031063_p91 | hypothetical protein | phrog_10651 | unknown function | unknown function | 1 | 70424 | 70684 |
| YP_009286261.1 | NC_031063_p40 | hypothetical protein | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 20961 | 21479 |
| YP_009286254.1 | NC_031063_p33 | hypothetical protein | phrog_4781 | unknown function | unknown function | 1 | 13330 | 13572 |
| YP_009286238.1 | NC_031063_p17 | hypothetical protein | phrog_335 | phosphatase | other | 1 | 5077 | 5517 |
| YP_009286242.1 | NC_031063_p21 | hypothetical protein | phrog_14277 | unknown function | unknown function | 1 | 7156 | 7440 |
| YP_009286273.1 | NC_031063_p52 | hypothetical protein | phrog_2687 | unknown function | unknown function | -1 | 29107 | 29301 |
| YP_009286230.1 | NC_031063_p9 | hypothetical protein | phrog_8885 | unknown function | unknown function | 1 | 2597 | 2815 |
| YP_009286310.1 | NC_031063_p89 | hypothetical protein | phrog_9047 | unknown function | unknown function | 1 | 69784 | 70215 |
| YP_009286276.1 | NC_031063_p55 | hypothetical protein | phrog_3370 | unknown function | unknown function | -1 | 32967 | 33638 |
| YP_009286277.1 | NC_031063_p56 | hypothetical protein | phrog_4047 | unknown function | unknown function | -1 | 33635 | 33934 |
| YP_009286225.1 | NC_031063_p4 | hypothetical protein | phrog_3968 | unknown function | unknown function | 1 | 1284 | 1526 |
| YP_009286290.1 | NC_031063_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43373 | 43561 |
| YP_009286293.1 | NC_031063_p72 | hypothetical protein | phrog_7891 | unknown function | unknown function | 1 | 44079 | 44396 |
| YP_009286308.1 | NC_031063_p87 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 67340 | 68992 |
| YP_009286304.1 | NC_031063_p83 | hypothetical protein | phrog_1216 | portal protein | head and packaging | -1 | 63639 | 65819 |
| YP_009286283.1 | NC_031063_p62 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 39662 | 40396 |
| YP_009286248.1 | NC_031063_p27 | hypothetical protein | phrog_8613 | unknown function | unknown function | 1 | 10166 | 10720 |
| YP_009286241.1 | NC_031063_p20 | hypothetical protein | phrog_8597 | unknown function | unknown function | 1 | 6861 | 7121 |
| YP_009286259.1 | NC_031063_p38 | hypothetical protein | phrog_7095 | unknown function | unknown function | 1 | 17686 | 18213 |
| YP_009286228.1 | NC_031063_p7 | hypothetical protein | phrog_8449 | unknown function | unknown function | 1 | 2073 | 2369 |
| YP_009286284.1 | NC_031063_p63 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40423 | 41169 |
| YP_009286235.1 | NC_031063_p14 | hypothetical protein | phrog_8775 | unknown function | unknown function | 1 | 4090 | 4425 |
| YP_009286298.1 | NC_031063_p77 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 56835 | 59057 |
| YP_009286234.1 | NC_031063_p13 | hypothetical protein | phrog_6271 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 3615 | 3905 |
| YP_009286313.1 | NC_031063_p92 | hypothetical protein | phrog_9146 | unknown function | unknown function | 1 | 70675 | 70983 |
| YP_009286272.1 | NC_031063_p51 | hypothetical protein | phrog_3108 | unknown function | unknown function | -1 | 28586 | 29110 |
| YP_009286260.1 | NC_031063_p39 | hypothetical protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18213 | 20828 |
| YP_009286249.1 | NC_031063_p28 | hypothetical protein | phrog_8451 | unknown function | unknown function | 1 | 10720 | 11301 |
| YP_009286250.1 | NC_031063_p29 | hypothetical protein | phrog_8374 | unknown function | unknown function | 1 | 11301 | 11822 |
| YP_009286300.1 | NC_031063_p79 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 60084 | 60749 |
| YP_009286257.1 | NC_031063_p36 | metallopeptidase | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15204 | 16430 |
| YP_009286251.1 | NC_031063_p30 | hypothetical protein | phrog_12464 | unknown function | unknown function | 1 | 11819 | 12043 |
| YP_009286296.1 | NC_031063_p75 | hypothetical protein | phrog_6467 | unknown function | unknown function | -1 | 54822 | 56387 |
| YP_009286274.1 | NC_031063_p53 | dUTPase | phrog_2398 | unknown function | unknown function | -1 | 29177 | 29656 |
| YP_009286279.1 | NC_031063_p58 | hypothetical protein | phrog_3360 | unknown function | unknown function | 1 | 35613 | 36041 |
| YP_009286302.1 | NC_031063_p81 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 62041 | 63231 |
| YP_009286224.1 | NC_031063_p3 | hypothetical protein | phrog_3968 | unknown function | unknown function | 1 | 1057 | 1287 |
| YP_009286223.1 | NC_031063_p2 | hypothetical protein | phrog_7624 | unknown function | unknown function | 1 | 851 | 1042 |
| YP_009286281.1 | NC_031063_p60 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 36420 | 37430 |
| YP_009286245.1 | NC_031063_p24 | hypothetical protein | phrog_8738 | unknown function | unknown function | 1 | 9090 | 9242 |
| YP_009286297.1 | NC_031063_p76 | hypothetical protein | phrog_2646 | unknown function | unknown function | -1 | 56387 | 56854 |
| YP_009286236.1 | NC_031063_p15 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 4425 | 4826 |
| YP_009286289.1 | NC_031063_p68 | hypothetical protein | phrog_7212 | unknown function | unknown function | 1 | 43036 | 43440 |
| YP_009286267.1 | NC_031063_p46 | hypothetical protein | phrog_7722 | unknown function | unknown function | 1 | 26598 | 26822 |
| YP_009286303.1 | NC_031063_p82 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 63231 | 63569 |
| YP_009286287.1 | NC_031063_p66 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 41966 | 42526 |
| YP_009286291.1 | NC_031063_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43577 | 43738 |
| YP_009286271.1 | NC_031063_p50 | hypothetical protein | phrog_312 | Rz-like spanin | lysis | -1 | 28077 | 28589 |
| YP_009286256.1 | NC_031063_p35 | hypothetical protein | phrog_14291 | unknown function | unknown function | 1 | 14686 | 15204 |
| YP_009286233.1 | NC_031063_p12 | hypothetical protein | phrog_8570 | unknown function | unknown function | 1 | 3336 | 3521 |
| YP_009286306.1 | NC_031063_p85 | hypothetical protein | phrog_8880 | unknown function | unknown function | 1 | 66277 | 66576 |
| YP_009286255.1 | NC_031063_p34 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 13604 | 14674 |
| YP_009286299.1 | NC_031063_p78 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 59115 | 60080 |
| YP_009286307.1 | NC_031063_p86 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 66609 | 67343 |
| YP_009286286.1 | NC_031063_p65 | hypothetical protein | phrog_3934 | unknown function | unknown function | 1 | 41535 | 41978 |
| YP_009286252.1 | NC_031063_p31 | hypothetical protein | phrog_8112 | unknown function | unknown function | 1 | 12287 | 12472 |