| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031069 |
Definition |
Streptococcus virus 9871, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
32729 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
37.05 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009286854.1 | NC_031069_p27 | hypothetical protein | phrog_1733 | unknown function | unknown function | 1 | 20459 | 21403 |
| YP_009286840.1 | NC_031069_p13 | tail chaperone protein | phrog_183 | tail chaperone protein | tail | 1 | 8197 | 8547 |
| YP_009286865.1 | NC_031069_p38 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 27452 | 28006 |
| YP_009286842.1 | NC_031069_p15 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8916 | 11666 |
| YP_009286849.1 | NC_031069_p22 | lysin | phrog_998 | endolysin | lysis | 1 | 18359 | 18961 |
| YP_009286831.1 | NC_031069_p4 | minor capsid protein | phrog_115 | minor head protein | head and packaging | 1 | 3318 | 4358 |
| YP_009286870.1 | NC_031069_p43 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 29144 | 29632 |
| YP_009286871.1 | NC_031069_p44 | DNA-binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29633 | 30145 |
| YP_009286851.1 | NC_031069_p24 | lysin | phrog_4238 | endolysin | lysis | 1 | 19420 | 19647 |
| YP_009286860.1 | NC_031069_p33 | hypothetical protein | phrog_3159 | unknown function | unknown function | 1 | 24317 | 24511 |
| YP_009286863.1 | NC_031069_p36 | hypothetical protein | phrog_4400 | unknown function | unknown function | 1 | 26332 | 26976 |
| YP_009286832.1 | NC_031069_p5 | scaffolding protein | phrog_2932 | head scaffolding protein | head and packaging | 1 | 4475 | 5074 |
| YP_009286846.1 | NC_031069_p19 | serine acetyltransferase | phrog_2154 | unknown function | unknown function | 1 | 17200 | 17727 |
| YP_009286839.1 | NC_031069_p12 | major tail protein | phrog_238 | major tail protein | tail | 1 | 7584 | 8081 |
| YP_009286874.1 | NC_031069_p47 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 31187 | 31894 |
| YP_009286869.1 | NC_031069_p42 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 28856 | 29011 |
| YP_009286873.1 | NC_031069_p46 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 30893 | 31183 |
| YP_009286866.1 | NC_031069_p39 | endodeoxyribonuclease RusA | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28003 | 28464 |
| YP_009286828.1 | NC_031069_p1 | hypothetical protein | phrog_2538 | terminase small subunit | head and packaging | 1 | 179 | 592 |
| YP_009286835.1 | NC_031069_p8 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 6224 | 6556 |
| YP_009286864.1 | NC_031069_p37 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 26991 | 27437 |
| YP_009286843.1 | NC_031069_p16 | distal tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 11676 | 12437 |
| YP_009286872.1 | NC_031069_p45 | DNA methyltransferase | phrog_2882 | DNA methyltransferase | other | 1 | 30148 | 30960 |
| YP_009286833.1 | NC_031069_p6 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 5090 | 5953 |
| YP_009286862.1 | NC_031069_p35 | nuclease | phrog_1227 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 25456 | 26292 |
| YP_009286836.1 | NC_031069_p9 | hypothetical protein | phrog_348 | minor head protein | head and packaging | 1 | 6553 | 6864 |
| YP_009286867.1 | NC_031069_p40 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 28525 | 28695 |
| YP_009286875.1 | NC_031069_p48 | hypothetical protein | phrog_11378 | unknown function | unknown function | -1 | 31960 | 32121 |
| YP_009286868.1 | NC_031069_p41 | hypothetical protein | phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 28686 | 28859 |
| YP_009286853.1 | NC_031069_p26 | Cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 20215 | 20418 |
| YP_009286858.1 | NC_031069_p31 | primosome component | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 22657 | 23526 |
| YP_009286838.1 | NC_031069_p11 | tail terminator protein | phrog_176 | tail terminator | connector | 1 | 7184 | 7573 |
| YP_009286848.1 | NC_031069_p21 | holin | phrog_297 | holin | lysis | 1 | 18112 | 18357 |
| YP_009286850.1 | NC_031069_p23 | endonuclease | phrog_9496 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 19168 | 19353 |
| YP_009286861.1 | NC_031069_p34 | RecT recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 24636 | 25463 |
| YP_009286845.1 | NC_031069_p18 | antireceptor | phrog_15175 | virion structural protein | head and packaging | 1 | 15181 | 17124 |
| YP_009286837.1 | NC_031069_p10 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6861 | 7187 |
| YP_009286841.1 | NC_031069_p14 | hypothetical protein | phrog_441 | tail assembly chaperone | tail | 1 | 8631 | 8900 |
| YP_009286829.1 | NC_031069_p2 | TerL | phrog_38 | terminase large subunit | head and packaging | 1 | 585 | 1973 |
| YP_009286857.1 | NC_031069_p30 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 22284 | 22406 |
| YP_009286830.1 | NC_031069_p3 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 1974 | 3314 |
| YP_009286876.1 | NC_031069_p49 | late transcriptional regulator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 32275 | 32673 |
| YP_009286856.1 | NC_031069_p29 | Cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 22058 | 22267 |
| YP_009286855.1 | NC_031069_p28 | hypothetical protein | phrog_2902 | anti-repressor | transcription regulation | 1 | 21396 | 21935 |
| YP_009286859.1 | NC_031069_p32 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 23538 | 24320 |
| YP_009286847.1 | NC_031069_p20 | holin | phrog_689 | holin | lysis | 1 | 17861 | 18085 |
| YP_009286844.1 | NC_031069_p17 | tail-associated lysin | phrog_1067 | minor head protein | head and packaging | 1 | 12437 | 15169 |
| YP_009286834.1 | NC_031069_p7 | hypothetical protein | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 6019 | 6210 |
| YP_009286852.1 | NC_031069_p25 | hypothetical protein | phrog_11088 | unknown function | unknown function | 1 | 19713 | 19850 |