Genomic map of Gordonia phage Bantam (NC_031074)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031074
Definition
Gordonia phage Bantam, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bantamvirus; Gordonia virus Bantam.
DB of origin
REFSEQ
Length
92580
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
168
%GC
64.7
Number of singletons
88
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009287510.1 NC_031074_p40 hypothetical protein phrog_2804 virion structural protein head and packaging 1 38815 39519
YP_009287638.1 NC_031074_p168 hypothetical protein singleton unknown function unknown function -1 90744 91040
YP_009287493.1 NC_031074_p23 major tail protein phrog_476 major tail protein tail 1 15333 15989
YP_009287530.1 NC_031074_p60 hypothetical protein singleton unknown function unknown function 1 46364 46564
YP_009287621.1 NC_031074_p151 hypothetical protein singleton unknown function unknown function -1 85445 85579
YP_009287559.1 NC_031074_p89 hypothetical protein singleton unknown function unknown function -1 61538 61669
YP_009287570.1 NC_031074_p100 HNH endonuclease phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 67594 68172
YP_009287540.1 NC_031074_p70 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 52125 52490
YP_009287583.1 NC_031074_p113 hypothetical protein singleton unknown function unknown function 1 72783 73022
YP_009287495.1 NC_031074_p25 tail assembly chaperone phrog_2624 tail assembly chaperone tail 1 16393 17321
YP_009287552.1 NC_031074_p82 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 56536 57099
YP_009287531.1 NC_031074_p61 hypothetical protein singleton unknown function unknown function 1 46997 47212
YP_009287546.1 NC_031074_p76 hypothetical protein phrog_21939 unknown function unknown function -1 54692 55117
YP_009287606.1 NC_031074_p136 hypothetical protein singleton unknown function unknown function -1 80630 80839
YP_009287535.1 NC_031074_p65 hypothetical protein singleton unknown function unknown function 1 49969 50184
YP_009287516.1 NC_031074_p46 exonuclease VII large subunit phrog_9454 exonuclease DNA, RNA and nucleotide metabolism 1 41103 42488
YP_009287589.1 NC_031074_p119 hypothetical protein phrog_10332 unknown function unknown function 1 74812 75093
YP_009287623.1 NC_031074_p153 hypothetical protein phrog_38007 unknown function unknown function -1 85809 85997
YP_009287487.1 NC_031074_p17 hypothetical protein singleton unknown function unknown function 1 12759 13229
YP_009287577.1 NC_031074_p107 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 70339 70695
YP_009287599.1 NC_031074_p129 lysin B phrog_102 endolysin lysis 1 78134 78856
YP_009287507.1 NC_031074_p37 hypothetical protein singleton unknown function unknown function 1 34680 34850
YP_009287619.1 NC_031074_p149 hypothetical protein singleton unknown function unknown function -1 85105 85236
YP_009287617.1 NC_031074_p147 hypothetical protein phrog_11556 unknown function unknown function -1 84553 84735
YP_009287551.1 NC_031074_p81 hypothetical protein singleton unknown function unknown function -1 56153 56410
YP_009287506.1 NC_031074_p36 minor tail protein phrog_4978 tail protein tail 1 32917 34665
YP_009287503.1 NC_031074_p33 membrane protein phrog_5552 membrane protein moron, auxiliary metabolic gene and host takeover 1 30999 31454
YP_009287627.1 NC_031074_p157 hypothetical protein singleton unknown function unknown function -1 86644 86802
YP_009287478.1 NC_031074_p8 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 4561 4869
YP_009287632.1 NC_031074_p162 hypothetical protein singleton unknown function unknown function -1 88026 88220
YP_009287602.1 NC_031074_p132 toxin phrog_577 Doc-like toxin moron, auxiliary metabolic gene and host takeover -1 79387 79776
YP_009287628.1 NC_031074_p158 hypothetical protein singleton unknown function unknown function -1 86802 87023
YP_009287579.1 NC_031074_p109 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 70960 71445
YP_009287604.1 NC_031074_p134 hypothetical protein singleton unknown function unknown function -1 80027 80149
YP_009287591.1 NC_031074_p121 hypothetical protein singleton unknown function unknown function 1 75193 75357
YP_009287549.1 NC_031074_p79 hypothetical protein singleton unknown function unknown function -1 55708 55890
YP_009287476.1 NC_031074_p6 hypothetical protein singleton unknown function unknown function 1 4036 4284
YP_009287580.1 NC_031074_p110 hypothetical protein singleton unknown function unknown function 1 71502 71705
YP_009287590.1 NC_031074_p120 hypothetical protein singleton unknown function unknown function 1 75086 75196
YP_009287574.1 NC_031074_p104 hypothetical protein singleton unknown function unknown function 1 69230 69424
YP_009287479.1 NC_031074_p9 hypothetical protein singleton unknown function unknown function 1 5413 5547
YP_009287474.1 NC_031074_p4 nicotinate phosphoribosyl transferase phrog_448 nicotinamide phosphoribosyl transferase other 1 2415 3905
YP_009287532.1 NC_031074_p62 integrase phrog_1 integrase integration and excision 1 47224 48609
YP_009287562.1 NC_031074_p92 ssDNA binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 62203 63033
YP_009287518.1 NC_031074_p48 hypothetical protein singleton unknown function unknown function 1 42658 42870
YP_009287554.1 NC_031074_p84 DNA helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 57463 59076
YP_009287576.1 NC_031074_p106 hypothetical protein phrog_4657 unknown function unknown function 1 69737 70342
YP_009287595.1 NC_031074_p125 hypothetical protein phrog_8143 unknown function unknown function 1 76064 76462
YP_009287586.1 NC_031074_p116 hypothetical protein phrog_11257 unknown function unknown function 1 73828 74457
YP_009287528.1 NC_031074_p58 hypothetical protein singleton unknown function unknown function 1 45335 45901
YP_009287631.1 NC_031074_p161 hypothetical protein phrog_1173 unknown function unknown function -1 87865 88026
YP_009287534.1 NC_031074_p64 immunity repressor phrog_3 transcriptional repressor transcription regulation -1 49360 49725
YP_009287496.1 NC_031074_p26 tail assembly chaperone phrog_11681 tail assembly chaperone tail 1 16393 16827
YP_009287475.1 NC_031074_p5 hypothetical protein singleton unknown function unknown function 1 3905 4039
YP_009287525.1 NC_031074_p55 hypothetical protein singleton unknown function unknown function 1 44754 44954
YP_009287477.1 NC_031074_p7 hypothetical protein singleton unknown function unknown function 1 4281 4574
YP_009287488.1 NC_031074_p18 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13233 13628
YP_009287558.1 NC_031074_p88 hypothetical protein phrog_11291 unknown function unknown function -1 61378 61545
YP_009287622.1 NC_031074_p152 hypothetical protein singleton unknown function unknown function -1 85581 85799
YP_009287626.1 NC_031074_p156 hypothetical protein singleton unknown function unknown function -1 86429 86557
YP_009287573.1 NC_031074_p103 hypothetical protein phrog_7314 unknown function unknown function 1 68901 69227
YP_009287605.1 NC_031074_p135 hypothetical protein phrog_2355 unknown function unknown function -1 80239 80637
YP_009287533.1 NC_031074_p63 hypothetical protein singleton unknown function unknown function -1 48596 49261
YP_009287584.1 NC_031074_p114 hypothetical protein phrog_3641 unknown function unknown function 1 73048 73236
YP_009287513.1 NC_031074_p43 hypothetical protein singleton unknown function unknown function 1 40384 40695
YP_009287514.1 NC_031074_p44 hypothetical protein singleton unknown function unknown function 1 40688 40948
YP_009287563.1 NC_031074_p93 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism -1 63124 64152
YP_009287471.1 NC_031074_p1 hypothetical protein singleton unknown function unknown function 1 93 677
YP_009287501.1 NC_031074_p31 lysin A, L-Ala-D-Glu peptidase domain phrog_1512 endolysin lysis 1 29638 30573
YP_009287585.1 NC_031074_p115 5' nucleotidase phrog_420 unknown function unknown function 1 73236 73817
YP_009287598.1 NC_031074_p128 hypothetical protein singleton unknown function unknown function 1 77539 78006
YP_009287613.1 NC_031074_p143 hypothetical protein singleton unknown function unknown function -1 82735 83175
YP_009287473.1 NC_031074_p3 phosphoribosyl transferase phrog_619 ribose-phosphate pyrophosphokinase other 1 1576 2418
YP_009287560.1 NC_031074_p90 hypothetical protein singleton unknown function unknown function -1 61672 61995
YP_009287594.1 NC_031074_p124 hypothetical protein singleton unknown function unknown function 1 75897 76064
YP_009287615.1 NC_031074_p145 hypothetical protein singleton unknown function unknown function -1 83415 83702
YP_009287571.1 NC_031074_p101 hypothetical protein singleton unknown function unknown function 1 68169 68636
YP_009287499.1 NC_031074_p29 minor tail protein phrog_110 minor tail protein tail 1 27105 28868
YP_009287610.1 NC_031074_p140 hypothetical protein singleton unknown function unknown function -1 81588 81782
YP_009287634.1 NC_031074_p164 hypothetical protein phrog_5371 unknown function unknown function -1 88843 89133
YP_009287597.1 NC_031074_p127 hypothetical protein singleton unknown function unknown function 1 77111 77539
YP_009287490.1 NC_031074_p20 hypothetical protein phrog_5210 neck protein connector 1 13959 14378
YP_009287607.1 NC_031074_p137 hypothetical protein singleton unknown function unknown function -1 80836 81153
YP_009287557.1 NC_031074_p87 HTH DNA binding protein singleton unknown function unknown function -1 60554 61381
YP_009287517.1 NC_031074_p47 exonuclease VII small subunit singleton unknown function unknown function 1 42485 42661
YP_009287611.1 NC_031074_p141 hypothetical protein singleton unknown function unknown function -1 81782 82081
YP_009287601.1 NC_031074_p131 hypothetical protein singleton unknown function unknown function -1 79124 79387
YP_009287536.1 NC_031074_p66 hypothetical protein phrog_11731 unknown function unknown function -1 50291 50872
YP_009287635.1 NC_031074_p165 hypothetical protein phrog_3906 unknown function unknown function -1 89235 90131
YP_009287581.1 NC_031074_p111 polynucleotide kinase phrog_505 polynucleotide kinase other 1 71702 72619
YP_009287541.1 NC_031074_p71 resolvase singleton unknown function unknown function -1 52490 52801
YP_009287564.1 NC_031074_p94 hypothetical protein singleton unknown function unknown function -1 64145 64372
YP_009287636.1 NC_031074_p166 hypothetical protein singleton unknown function unknown function -1 90146 90499
YP_009287480.1 NC_031074_p10 hypothetical protein phrog_226 minor tail protein tail 1 5625 6089
YP_009287504.1 NC_031074_p34 hypothetical protein phrog_9635 unknown function unknown function 1 31444 31824
YP_009287593.1 NC_031074_p123 hypothetical protein singleton unknown function unknown function 1 75572 75904
YP_009287582.1 NC_031074_p112 hypothetical protein singleton unknown function unknown function 1 72649 72786
YP_009287472.1 NC_031074_p2 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 764 1576
YP_009287526.1 NC_031074_p56 hypothetical protein singleton unknown function unknown function 1 44951 45040
YP_009287511.1 NC_031074_p41 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 39533 39895
YP_009287565.1 NC_031074_p95 HTH DNA binding protein singleton unknown function unknown function 1 64486 64971
YP_009287553.1 NC_031074_p83 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 57115 57381
YP_009287550.1 NC_031074_p80 hypothetical protein singleton unknown function unknown function -1 55887 56153
YP_009287609.1 NC_031074_p139 hypothetical protein singleton unknown function unknown function -1 81437 81586
YP_009287630.1 NC_031074_p160 hypothetical protein singleton unknown function unknown function -1 87780 87863
YP_009287537.1 NC_031074_p67 hypothetical protein singleton unknown function unknown function -1 50869 51126
YP_009287527.1 NC_031074_p57 hypothetical protein singleton unknown function unknown function 1 45037 45360
YP_009287519.1 NC_031074_p49 hypothetical protein singleton unknown function unknown function 1 42867 43088
YP_009287485.1 NC_031074_p15 head decoration protein phrog_3583 head decoration head and packaging 1 11161 11574
YP_009287542.1 NC_031074_p72 hypothetical protein singleton unknown function unknown function -1 52798 53232
YP_009287481.1 NC_031074_p11 terminase phrog_9 terminase large subunit head and packaging 1 6089 7825
YP_009287544.1 NC_031074_p74 hypothetical protein singleton unknown function unknown function -1 53468 54088
YP_009287539.1 NC_031074_p69 hypothetical protein singleton unknown function unknown function -1 51478 52128
YP_009287637.1 NC_031074_p167 hypothetical protein singleton unknown function unknown function -1 90535 90699
YP_009287592.1 NC_031074_p122 hypothetical protein singleton unknown function unknown function 1 75354 75575
YP_009287625.1 NC_031074_p155 hypothetical protein singleton unknown function unknown function -1 86199 86429
YP_009287587.1 NC_031074_p117 hypothetical protein singleton unknown function unknown function 1 74454 74633
YP_009287521.1 NC_031074_p51 hypothetical protein singleton unknown function unknown function 1 43483 43737
YP_009287575.1 NC_031074_p105 hypothetical protein singleton unknown function unknown function 1 69417 69740
YP_009287578.1 NC_031074_p108 hypothetical protein phrog_11181 unknown function unknown function 1 70698 70901
YP_009287600.1 NC_031074_p130 hypothetical protein singleton unknown function unknown function 1 78853 79113
YP_009287568.1 NC_031074_p98 hypothetical protein singleton unknown function unknown function 1 66015 66221
YP_009287482.1 NC_031074_p12 portal protein phrog_104 portal protein head and packaging 1 7834 9393
YP_009287620.1 NC_031074_p150 hypothetical protein singleton unknown function unknown function -1 85230 85445
YP_009287497.1 NC_031074_p27 tape measure protein phrog_7025 tail length tape measure protein tail 1 17349 26183
YP_009287569.1 NC_031074_p99 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 66218 67597
YP_009287538.1 NC_031074_p68 hypothetical protein singleton unknown function unknown function -1 51126 51497
YP_009287529.1 NC_031074_p59 hypothetical protein singleton unknown function unknown function 1 46074 46343
YP_009287494.1 NC_031074_p24 hypothetical protein singleton unknown function unknown function 1 16107 16361
YP_009287561.1 NC_031074_p91 HTH DNA binding domain protein phrog_66 excisionase and transcriptional regulator integration and excision -1 62006 62206
YP_009287512.1 NC_031074_p42 hypothetical protein singleton unknown function unknown function 1 40031 40180
YP_009287484.1 NC_031074_p14 scaffolding protein phrog_4708 head scaffolding protein head and packaging 1 10395 11135
YP_009287633.1 NC_031074_p163 ArdA-like antirestriction protein phrog_2059 anti-restriction protein moron, auxiliary metabolic gene and host takeover -1 88222 88764
YP_009287522.1 NC_031074_p52 hypothetical protein phrog_419 unknown function unknown function 1 43734 44000
YP_009287492.1 NC_031074_p22 endonuclease VII phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 14778 15239
YP_009287523.1 NC_031074_p53 hypothetical protein phrog_9642 unknown function unknown function 1 44000 44365
YP_009287524.1 NC_031074_p54 DrpA-like ssDNA binding protein phrog_289 GTP-binding domain other 1 44365 44757
YP_009287616.1 NC_031074_p146 hypothetical protein singleton unknown function unknown function -1 83699 84475
YP_009287624.1 NC_031074_p154 hypothetical protein singleton unknown function unknown function -1 85999 86196
YP_009287547.1 NC_031074_p77 hypothetical protein singleton unknown function unknown function -1 55114 55407
YP_009287556.1 NC_031074_p86 HTH DNA binding protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism -1 59627 60544
YP_009287603.1 NC_031074_p133 antitoxin singleton unknown function unknown function -1 79773 79970
YP_009287555.1 NC_031074_p85 hypothetical protein phrog_10563 unknown function unknown function -1 59082 59627
YP_009287489.1 NC_031074_p19 hypothetical protein phrog_501 head closure Hc1 connector 1 13628 13957
YP_009287502.1 NC_031074_p32 holin phrog_565 holin lysis 1 30576 30989
YP_009287508.1 NC_031074_p38 hypothetical protein phrog_10433 minor tail protein tail 1 34863 35567
YP_009287629.1 NC_031074_p159 hypothetical protein singleton unknown function unknown function -1 87020 87742
YP_009287486.1 NC_031074_p16 major capsid protein phrog_29 major head protein head and packaging 1 11610 12665
YP_009287612.1 NC_031074_p142 hypothetical protein singleton unknown function unknown function -1 82083 82733
YP_009287588.1 NC_031074_p118 hypothetical protein singleton unknown function unknown function 1 74630 74815
YP_009287567.1 NC_031074_p97 nucleotidyltransferase phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 65318 65998
YP_009287548.1 NC_031074_p78 hypothetical protein singleton unknown function unknown function -1 55404 55715
YP_009287543.1 NC_031074_p73 hypothetical protein phrog_1454 unknown function unknown function -1 53229 53471
YP_009287566.1 NC_031074_p96 hypothetical protein singleton unknown function unknown function 1 65106 65318
YP_009287515.1 NC_031074_p45 hypothetical protein phrog_10260 unknown function unknown function 1 40945 41127
YP_009287483.1 NC_031074_p13 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 9393 10283
YP_009287545.1 NC_031074_p75 WhiB family transcription factor phrog_10802 transcriptional regulator WhiB-like transcription regulation -1 54099 54620
YP_009287596.1 NC_031074_p126 hypothetical protein phrog_9564 unknown function unknown function 1 76459 76956
YP_009287520.1 NC_031074_p50 hypothetical protein singleton unknown function unknown function 1 43085 43486
YP_009287500.1 NC_031074_p30 lysin A, cysteine protease domain phrog_6007 endolysin lysis 1 28997 29641
YP_009287608.1 NC_031074_p138 hypothetical protein phrog_2903 unknown function unknown function -1 81150 81437
YP_009287614.1 NC_031074_p144 hypothetical protein singleton unknown function unknown function -1 83177 83413
YP_009287572.1 NC_031074_p102 hypothetical protein singleton unknown function unknown function 1 68638 68901
YP_009287491.1 NC_031074_p21 hypothetical protein phrog_123 tail terminator connector 1 14375 14773
YP_009287505.1 NC_031074_p35 minor tail protein phrog_4120 minor tail protein tail 1 31839 32912
YP_009287618.1 NC_031074_p148 hypothetical protein phrog_3963 unknown function unknown function -1 84735 85100
YP_009287509.1 NC_031074_p39 minor tail protein phrog_9707 tail protein tail 1 35564 38815
YP_009287498.1 NC_031074_p28 minor tail protein phrog_106 minor tail protein tail 1 26180 27064