Genomic map of Lactococcus phage M5938 (NC_031075)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Lactococcus phage M5938, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ceduovirus.
DB of origin
Host Name
Lactococcus lactis
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009287663.1 NC_031075_p25 capsid and scaffold protein phrog_3270 head maturation protease head and packaging 1 9898 11340
YP_009287669.1 NC_031075_p31 tail length tape-measure protein phrog_9145 tail length tape measure protein tail 1 13610 15472
YP_009287665.1 NC_031075_p27 tail fibers protein phrog_2634 major tail protein tail 1 12081 12698
YP_009287666.1 NC_031075_p28 hypothetical protein phrog_10561 unknown function unknown function 1 12771 13025
YP_009287658.1 NC_031075_p20 hypothetical protein phrog_11709 unknown function unknown function -1 6896 7042
YP_009287676.1 NC_031075_p38 holin phrog_9407 holin lysis 1 21787 22077
YP_009287649.1 NC_031075_p11 hypothetical protein phrog_1632 unknown function unknown function -1 3526 3771
YP_009287643.1 NC_031075_p5 hypothetical protein phrog_1317 unknown function unknown function -1 1452 1952
YP_009287659.1 NC_031075_p21 hypothetical protein phrog_10074 unknown function unknown function 1 7726 7875
YP_009287672.1 NC_031075_p34 hypothetical protein phrog_10033 unknown function unknown function 1 17324 17623
YP_009287644.1 NC_031075_p6 hypothetical protein phrog_1295 unknown function unknown function -1 1949 2113
YP_009287674.1 NC_031075_p36 capsid and scaffold protein phrog_10067 virion structural protein head and packaging 1 19538 20521
YP_009287642.1 NC_031075_p4 hypothetical protein phrog_10525 unknown function unknown function -1 1127 1450
YP_009287664.1 NC_031075_p26 hypothetical protein phrog_10227 unknown function unknown function 1 11359 12063
YP_009287640.1 NC_031075_p2 hypothetical protein phrog_10769 unknown function unknown function -1 436 810
YP_009287661.1 NC_031075_p23 N-acetylmuramoyl-L-alanine amidase phrog_7 endolysin lysis 1 8402 9097
YP_009287662.1 NC_031075_p24 capsid and scaffold protein phrog_10159 virion structural protein head and packaging 1 9108 9947
YP_009287671.1 NC_031075_p33 terminase large subunit phrog_9 terminase large subunit head and packaging 1 15768 17324
YP_009287646.1 NC_031075_p8 essential recombination function protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 2563 3102
YP_009287639.1 NC_031075_p1 transcriptional regulator phrog_12561 transcriptional regulator transcription regulation -1 265 435
YP_009287651.1 NC_031075_p13 hypothetical protein phrog_3530 unknown function unknown function -1 3942 4382
YP_009287652.1 NC_031075_p14 hypothetical protein phrog_1225 unknown function unknown function -1 4379 4729
YP_009287670.1 NC_031075_p32 hypothetical protein phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15469 15756
YP_009287657.1 NC_031075_p19 hypothetical protein phrog_10138 unknown function unknown function -1 6699 6899
YP_009287673.1 NC_031075_p35 hypothetical protein phrog_10648 unknown function unknown function 1 17620 19536
YP_009287660.1 NC_031075_p22 hypothetical protein phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 7886 8371
YP_009287668.1 NC_031075_p30 hypothetical protein phrog_10523 unknown function unknown function 1 13213 13617
YP_009287653.1 NC_031075_p15 hypothetical protein phrog_9988 unknown function unknown function -1 4729 4902
YP_009287656.1 NC_031075_p18 hypothetical protein phrog_1284 unknown function unknown function -1 5798 6697
YP_009287645.1 NC_031075_p7 hypothetical protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 2126 2497
YP_009287675.1 NC_031075_p37 capsid and scaffold protein phrog_10326 virion structural protein head and packaging 1 20514 21764
YP_009287655.1 NC_031075_p17 DNA polymerase phrog_10577 DNA polymerase DNA, RNA and nucleotide metabolism -1 5347 5727
YP_009287654.1 NC_031075_p16 hypothetical protein phrog_10596 unknown function unknown function -1 4958 5347
YP_009287650.1 NC_031075_p12 transcriptional regulator phrog_10808 transcriptional regulator transcription regulation -1 3743 3928
YP_009287641.1 NC_031075_p3 hypothetical protein phrog_10148 unknown function unknown function -1 832 1134
YP_009287667.1 NC_031075_p29 hypothetical protein phrog_12461 unknown function unknown function 1 13067 13237
YP_009287647.1 NC_031075_p9 hypothetical protein phrog_10559 unknown function unknown function -1 3102 3254
YP_009287648.1 NC_031075_p10 hypothetical protein phrog_11155 unknown function unknown function -1 3323 3526