Genomic map of Propionibacterium phage PFR1 (NC_031076)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031076
Definition
Propionibacterium phage PFR1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pulverervirus.
DB of origin
REFSEQ
Length
38071
Host Name
Propionibacterium freudenreichii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
64.84
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009287679.1 NC_031076_p3 hypothetical protein phrog_2662 portal protein head and packaging 1 2000 4156
YP_009287732.1 NC_031076_p56 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 37336 37851
YP_009287687.1 NC_031076_p11 hypothetical protein phrog_393 tail assembly chaperone tail 1 8805 9451
YP_009287720.1 NC_031076_p44 hypothetical protein phrog_16347 unknown function unknown function 1 31221 31652
YP_009287684.1 NC_031076_p8 hypothetical protein phrog_32076 unknown function unknown function 1 7277 7696
YP_009287682.1 NC_031076_p6 hypothetical protein phrog_442 head-tail adaptor connector 1 6360 6935
YP_009287691.1 NC_031076_p15 hypothetical protein phrog_1887 tail protein tail 1 13778 14950
YP_009287699.1 NC_031076_p23 hypothetical protein phrog_15934 unknown function unknown function -1 19025 19912
YP_009287707.1 NC_031076_p31 hypothetical protein phrog_5931 unknown function unknown function 1 24480 25334
YP_009287717.1 NC_031076_p41 hypothetical protein phrog_22295 unknown function unknown function 1 30224 30463
YP_009287683.1 NC_031076_p7 hypothetical protein phrog_501 head closure Hc1 connector 1 6932 7273
YP_009287697.1 NC_031076_p21 hypothetical protein phrog_291 endolysin lysis 1 17734 18570
YP_009287715.1 NC_031076_p39 DNA methylase phrog_67 DNA methyltransferase other 1 29215 30003
YP_009287702.1 NC_031076_p26 hypothetical protein phrog_1 integrase integration and excision -1 21039 22175
YP_009287705.1 NC_031076_p29 hypothetical protein phrog_4583 transcriptional repressor transcription regulation 1 23492 23764
YP_009287714.1 NC_031076_p38 hypothetical protein phrog_11615 DNA binding protein DNA, RNA and nucleotide metabolism 1 28805 29218
YP_009287725.1 NC_031076_p49 hypothetical protein phrog_22143 unknown function unknown function 1 34243 34713
YP_009287727.1 NC_031076_p51 hypothetical protein phrog_33506 unknown function unknown function 1 35323 35763
YP_009287713.1 NC_031076_p37 hypothetical protein phrog_472 WhiB transcriptional factor transcription regulation 1 28506 28805
YP_009287685.1 NC_031076_p9 hypothetical protein phrog_123 tail terminator connector 1 7693 8106
YP_009287731.1 NC_031076_p55 hypothetical protein phrog_8013 unknown function unknown function 1 36479 37183
YP_009287712.1 NC_031076_p36 hypothetical protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 27536 28372
YP_009287716.1 NC_031076_p40 hypothetical protein phrog_14680 unknown function unknown function 1 30000 30227
YP_009287695.1 NC_031076_p19 hypothetical protein phrog_10606 membrane protein moron, auxiliary metabolic gene and host takeover 1 16983 17417
YP_009287722.1 NC_031076_p46 hypothetical protein phrog_23424 unknown function unknown function 1 32758 33003
YP_009287726.1 NC_031076_p50 single-stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 34850 35323
YP_009287721.1 NC_031076_p45 hypothetical protein phrog_116 DNA methyltransferase other 1 31715 32761
YP_009287681.1 NC_031076_p5 hypothetical protein phrog_10 major head protein head and packaging 1 4989 6275
YP_009287728.1 NC_031076_p52 hypothetical protein phrog_9864 unknown function unknown function 1 35760 35990
YP_009287694.1 NC_031076_p18 hypothetical protein phrog_21056 minor tail protein tail 1 15811 16983
YP_009287708.1 NC_031076_p32 hypothetical protein phrog_6401 DNA binding protein DNA, RNA and nucleotide metabolism 1 25407 25640
YP_009287704.1 NC_031076_p28 transcriptional regulator phrog_4583 transcriptional repressor transcription regulation -1 23166 23426
YP_009287718.1 NC_031076_p42 hypothetical protein phrog_33063 unknown function unknown function 1 30702 30911
YP_009287680.1 NC_031076_p4 hypothetical protein phrog_80 head maturation protease head and packaging 1 4171 4992
YP_009287686.1 NC_031076_p10 hypothetical protein phrog_117 major tail protein tail 1 8107 8706
YP_009287700.1 NC_031076_p24 hypothetical protein phrog_26193 unknown function unknown function -1 19953 20384
YP_009287730.1 NC_031076_p54 hypothetical protein phrog_18006 unknown function unknown function 1 36190 36492
YP_009287706.1 NC_031076_p30 hypothetical protein phrog_29861 unknown function unknown function 1 23761 24480
YP_009287723.1 NC_031076_p47 hypothetical protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 32984 33379
YP_009287689.1 NC_031076_p13 hypothetical protein phrog_971 endolysin lysis 1 9476 12970
YP_009287724.1 NC_031076_p48 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 33401 34246
YP_009287701.1 NC_031076_p25 hypothetical protein phrog_27679 unknown function unknown function -1 20446 20895
YP_009287711.1 NC_031076_p35 hypothetical protein phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 26634 27539
YP_009287677.1 NC_031076_p1 hypothetical protein phrog_10639 DNA binding protein DNA, RNA and nucleotide metabolism 1 1 396
YP_009287710.1 NC_031076_p34 hypothetical protein phrog_8332 unknown function unknown function 1 25864 26598
YP_009287703.1 NC_031076_p27 hypothetical protein phrog_4980 superinfection exclusion moron, auxiliary metabolic gene and host takeover -1 22514 22984
YP_009287688.1 NC_031076_p12 hypothetical protein phrog_22068 unknown function unknown function 1 8805 9089
YP_009287693.1 NC_031076_p17 hypothetical protein phrog_14767 unknown function unknown function 1 15200 15811
YP_009287719.1 NC_031076_p43 hypothetical protein phrog_19369 unknown function unknown function 1 30913 31224
YP_009287692.1 NC_031076_p16 hypothetical protein phrog_15543 unknown function unknown function 1 14947 15186
YP_009287698.1 NC_031076_p22 hypothetical protein phrog_443 holin lysis 1 18567 18905
YP_009287690.1 NC_031076_p14 hypothetical protein phrog_11649 tail protein tail 1 12972 13781
YP_009287729.1 NC_031076_p53 hypothetical protein phrog_25716 unknown function unknown function 1 35987 36193
YP_009287678.1 NC_031076_p2 hypothetical protein phrog_9 terminase large subunit head and packaging 1 407 1978
YP_009287696.1 NC_031076_p20 hypothetical protein phrog_12141 unknown function unknown function 1 17414 17689
YP_009287709.1 NC_031076_p33 hypothetical protein phrog_36710 unknown function unknown function 1 25637 25867