Genomic map of Streptomyces phage Nanodon (NC_031078)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031078
Definition
Streptomyces phage Nanodon, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus.
DB of origin
REFSEQ
Length
50082
Host Name
Streptomyces griseus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
75
%GC
65.69
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009287833.1 NC_031078_p49 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 32264 34354
YP_009287790.1 NC_031078_p6 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 1865 2113
YP_009287853.1 NC_031078_p69 hypothetical protein phrog_6619 unknown function unknown function -1 46270 46521
YP_009287825.1 NC_031078_p41 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 28466 29131
YP_009287848.1 NC_031078_p64 hypothetical protein phrog_4867 unknown function unknown function -1 44204 44557
YP_009287832.1 NC_031078_p48 hypothetical protein phrog_4123 unknown function unknown function 1 31827 32165
YP_009287785.1 NC_031078_p1 hypothetical protein phrog_4207 unknown function unknown function -1 102 296
YP_009287844.1 NC_031078_p60 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other -1 42612 43220
YP_009287793.1 NC_031078_p9 portal protein phrog_104 portal protein head and packaging 1 4252 5685
YP_009287839.1 NC_031078_p55 hypothetical protein phrog_4071 unknown function unknown function -1 37470 37748
YP_009287800.1 NC_031078_p16 hypothetical protein phrog_123 tail terminator connector 1 9736 10239
YP_009287816.1 NC_031078_p32 hypothetical protein phrog_5250 unknown function unknown function 1 23831 24151
YP_009287847.1 NC_031078_p63 hypothetical protein phrog_4785 unknown function unknown function -1 43854 44114
YP_009287788.1 NC_031078_p4 hypothetical protein singleton unknown function unknown function 1 1273 1554
YP_009287815.1 NC_031078_p31 immunity repressor phrog_3929 transcriptional repressor transcription regulation 1 23239 23691
YP_009287819.1 NC_031078_p35 hypothetical protein phrog_1288 unknown function unknown function 1 25821 26258
YP_009287823.1 NC_031078_p39 hypothetical protein phrog_4673 unknown function unknown function 1 28056 28208
YP_009287794.1 NC_031078_p10 hypothetical protein phrog_193 head maturation protease head and packaging 1 5682 6794
YP_009287834.1 NC_031078_p50 Lsr2 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 34429 34755
YP_009287842.1 NC_031078_p58 hypothetical protein phrog_3965 unknown function unknown function -1 41672 42103
YP_009287843.1 NC_031078_p59 hypothetical protein phrog_4024 unknown function unknown function -1 42188 42598
YP_009287798.1 NC_031078_p14 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 9003 9338
YP_009287796.1 NC_031078_p12 major capsid protein phrog_283 major head protein head and packaging 1 7410 8483
YP_009287789.1 NC_031078_p5 hypothetical protein phrog_3555 unknown function unknown function 1 1629 1859
YP_009287802.1 NC_031078_p18 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 11129 11844
YP_009287854.1 NC_031078_p70 hypothetical protein phrog_2355 unknown function unknown function -1 46518 46931
YP_009287841.1 NC_031078_p57 hypothetical protein phrog_3424 unknown function unknown function -1 41422 41658
YP_009287799.1 NC_031078_p15 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 9338 9736
YP_009287818.1 NC_031078_p34 hypothetical protein phrog_3912 unknown function unknown function 1 25241 25756
YP_009287821.1 NC_031078_p37 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 26870 27625
YP_009287845.1 NC_031078_p61 hypothetical protein phrog_3991 unknown function unknown function -1 43217 43459
YP_009287831.1 NC_031078_p47 transcriptional regulator phrog_3512 sigma factor transcription regulation 1 31432 31830
YP_009287792.1 NC_031078_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2573 4219
YP_009287804.1 NC_031078_p20 tape measure protein phrog_305 tail length tape measure protein tail 1 11848 15171
YP_009287797.1 NC_031078_p13 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8557 9006
YP_009287786.1 NC_031078_p2 hypothetical protein singleton unknown function unknown function 1 313 504
YP_009287857.1 NC_031078_p73 hypothetical protein phrog_3994 unknown function unknown function -1 48134 48586
YP_009287859.1 NC_031078_p75 hypothetical protein phrog_2563 unknown function unknown function -1 48893 49270
YP_009287812.1 NC_031078_p28 endolysin phrog_1493 endolysin lysis 1 21617 22561
YP_009287827.1 NC_031078_p43 hypothetical protein phrog_6217 unknown function unknown function 1 29475 29651
YP_009287840.1 NC_031078_p56 DNA polymerase III alpha phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism -1 37946 41425
YP_009287826.1 NC_031078_p42 hypothetical protein phrog_4022 unknown function unknown function 1 29128 29478
YP_009287787.1 NC_031078_p3 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 713 1027
YP_009287835.1 NC_031078_p51 integrase phrog_95 integrase integration and excision 1 34791 36407
YP_009287846.1 NC_031078_p62 hypothetical protein phrog_9416 unknown function unknown function -1 43456 43761
YP_009287836.1 NC_031078_p52 hypothetical protein phrog_9533 unknown function unknown function -1 36453 36653
YP_009287809.1 NC_031078_p25 hypothetical protein phrog_18853 unknown function unknown function 1 19405 19818
YP_009287817.1 NC_031078_p33 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 24148 25116
YP_009287858.1 NC_031078_p74 hypothetical protein phrog_4485 unknown function unknown function -1 48675 48794
YP_009287805.1 NC_031078_p21 hypothetical protein phrog_33 distal tail protein Dit tail 1 15175 16032
YP_009287837.1 NC_031078_p53 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 36650 37369
YP_009287851.1 NC_031078_p67 hypothetical protein phrog_3908 unknown function unknown function -1 45526 45729
YP_009287810.1 NC_031078_p26 hypothetical protein phrog_988 tail protein tail 1 19889 21238
YP_009287791.1 NC_031078_p7 hypothetical protein phrog_226 minor tail protein tail 1 2127 2552
YP_009287849.1 NC_031078_p65 hypothetical protein phrog_5209 unknown function unknown function -1 44562 44867
YP_009287808.1 NC_031078_p24 hypothetical protein phrog_4013 unknown function unknown function 1 17550 19367
YP_009287820.1 NC_031078_p36 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 26328 26813
YP_009287852.1 NC_031078_p68 hypothetical protein phrog_4239 unknown function unknown function -1 45732 46151
YP_009287806.1 NC_031078_p22 minor tail protein phrog_538 minor tail protein tail 1 16037 17248
YP_009287856.1 NC_031078_p72 hypothetical protein phrog_4313 unknown function unknown function -1 47185 48012
YP_009287803.1 NC_031078_p19 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 11129 11452
YP_009287855.1 NC_031078_p71 hypothetical protein phrog_4275 unknown function unknown function -1 46954 47085
YP_009287811.1 NC_031078_p27 hypothetical protein phrog_3534 unknown function unknown function 1 21238 21588
YP_009287822.1 NC_031078_p38 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27697 28059
YP_009287828.1 NC_031078_p44 hypothetical protein phrog_3979 unknown function unknown function 1 29648 29866
YP_009287795.1 NC_031078_p11 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 6798 7337
YP_009287850.1 NC_031078_p66 HNH endonuclease phrog_4842 HNH endonuclease DNA, RNA and nucleotide metabolism -1 44961 45425
YP_009287829.1 NC_031078_p45 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 29859 31049
YP_009287813.1 NC_031078_p29 hypothetical protein phrog_4092 unknown function unknown function 1 22564 22827
YP_009287824.1 NC_031078_p40 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism 1 28195 28632
YP_009287801.1 NC_031078_p17 hypothetical protein phrog_117 major tail protein tail 1 10256 11008
YP_009287814.1 NC_031078_p30 hypothetical protein phrog_4061 unknown function unknown function -1 22875 23144
YP_009287838.1 NC_031078_p54 hypothetical protein singleton unknown function unknown function -1 37366 37473
YP_009287807.1 NC_031078_p23 hypothetical protein phrog_1276 unknown function unknown function 1 17252 17548
YP_009287830.1 NC_031078_p46 hypothetical protein phrog_1340 unknown function unknown function 1 31082 31435