| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031078 |
Definition |
Streptomyces phage Nanodon, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus. |
DB of origin |
REFSEQ |
Length |
50082 |
Host Name |
Streptomyces griseus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
65.69 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009287833.1 | NC_031078_p49 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | 1 | 32264 | 34354 |
| YP_009287790.1 | NC_031078_p6 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 1865 | 2113 |
| YP_009287853.1 | NC_031078_p69 | hypothetical protein | phrog_6619 | unknown function | unknown function | -1 | 46270 | 46521 |
| YP_009287825.1 | NC_031078_p41 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28466 | 29131 |
| YP_009287848.1 | NC_031078_p64 | hypothetical protein | phrog_4867 | unknown function | unknown function | -1 | 44204 | 44557 |
| YP_009287832.1 | NC_031078_p48 | hypothetical protein | phrog_4123 | unknown function | unknown function | 1 | 31827 | 32165 |
| YP_009287785.1 | NC_031078_p1 | hypothetical protein | phrog_4207 | unknown function | unknown function | -1 | 102 | 296 |
| YP_009287844.1 | NC_031078_p60 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 42612 | 43220 |
| YP_009287793.1 | NC_031078_p9 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 4252 | 5685 |
| YP_009287839.1 | NC_031078_p55 | hypothetical protein | phrog_4071 | unknown function | unknown function | -1 | 37470 | 37748 |
| YP_009287800.1 | NC_031078_p16 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9736 | 10239 |
| YP_009287816.1 | NC_031078_p32 | hypothetical protein | phrog_5250 | unknown function | unknown function | 1 | 23831 | 24151 |
| YP_009287847.1 | NC_031078_p63 | hypothetical protein | phrog_4785 | unknown function | unknown function | -1 | 43854 | 44114 |
| YP_009287788.1 | NC_031078_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1273 | 1554 |
| YP_009287815.1 | NC_031078_p31 | immunity repressor | phrog_3929 | transcriptional repressor | transcription regulation | 1 | 23239 | 23691 |
| YP_009287819.1 | NC_031078_p35 | hypothetical protein | phrog_1288 | unknown function | unknown function | 1 | 25821 | 26258 |
| YP_009287823.1 | NC_031078_p39 | hypothetical protein | phrog_4673 | unknown function | unknown function | 1 | 28056 | 28208 |
| YP_009287794.1 | NC_031078_p10 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 5682 | 6794 |
| YP_009287834.1 | NC_031078_p50 | Lsr2 DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | 1 | 34429 | 34755 |
| YP_009287842.1 | NC_031078_p58 | hypothetical protein | phrog_3965 | unknown function | unknown function | -1 | 41672 | 42103 |
| YP_009287843.1 | NC_031078_p59 | hypothetical protein | phrog_4024 | unknown function | unknown function | -1 | 42188 | 42598 |
| YP_009287798.1 | NC_031078_p14 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 9003 | 9338 |
| YP_009287796.1 | NC_031078_p12 | major capsid protein | phrog_283 | major head protein | head and packaging | 1 | 7410 | 8483 |
| YP_009287789.1 | NC_031078_p5 | hypothetical protein | phrog_3555 | unknown function | unknown function | 1 | 1629 | 1859 |
| YP_009287802.1 | NC_031078_p18 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 11129 | 11844 |
| YP_009287854.1 | NC_031078_p70 | hypothetical protein | phrog_2355 | unknown function | unknown function | -1 | 46518 | 46931 |
| YP_009287841.1 | NC_031078_p57 | hypothetical protein | phrog_3424 | unknown function | unknown function | -1 | 41422 | 41658 |
| YP_009287799.1 | NC_031078_p15 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 9338 | 9736 |
| YP_009287818.1 | NC_031078_p34 | hypothetical protein | phrog_3912 | unknown function | unknown function | 1 | 25241 | 25756 |
| YP_009287821.1 | NC_031078_p37 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 26870 | 27625 |
| YP_009287845.1 | NC_031078_p61 | hypothetical protein | phrog_3991 | unknown function | unknown function | -1 | 43217 | 43459 |
| YP_009287831.1 | NC_031078_p47 | transcriptional regulator | phrog_3512 | sigma factor | transcription regulation | 1 | 31432 | 31830 |
| YP_009287792.1 | NC_031078_p8 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2573 | 4219 |
| YP_009287804.1 | NC_031078_p20 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 11848 | 15171 |
| YP_009287797.1 | NC_031078_p13 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8557 | 9006 |
| YP_009287786.1 | NC_031078_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 313 | 504 |
| YP_009287857.1 | NC_031078_p73 | hypothetical protein | phrog_3994 | unknown function | unknown function | -1 | 48134 | 48586 |
| YP_009287859.1 | NC_031078_p75 | hypothetical protein | phrog_2563 | unknown function | unknown function | -1 | 48893 | 49270 |
| YP_009287812.1 | NC_031078_p28 | endolysin | phrog_1493 | endolysin | lysis | 1 | 21617 | 22561 |
| YP_009287827.1 | NC_031078_p43 | hypothetical protein | phrog_6217 | unknown function | unknown function | 1 | 29475 | 29651 |
| YP_009287840.1 | NC_031078_p56 | DNA polymerase III alpha | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 37946 | 41425 |
| YP_009287826.1 | NC_031078_p42 | hypothetical protein | phrog_4022 | unknown function | unknown function | 1 | 29128 | 29478 |
| YP_009287787.1 | NC_031078_p3 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 713 | 1027 |
| YP_009287835.1 | NC_031078_p51 | integrase | phrog_95 | integrase | integration and excision | 1 | 34791 | 36407 |
| YP_009287846.1 | NC_031078_p62 | hypothetical protein | phrog_9416 | unknown function | unknown function | -1 | 43456 | 43761 |
| YP_009287836.1 | NC_031078_p52 | hypothetical protein | phrog_9533 | unknown function | unknown function | -1 | 36453 | 36653 |
| YP_009287809.1 | NC_031078_p25 | hypothetical protein | phrog_18853 | unknown function | unknown function | 1 | 19405 | 19818 |
| YP_009287817.1 | NC_031078_p33 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 24148 | 25116 |
| YP_009287858.1 | NC_031078_p74 | hypothetical protein | phrog_4485 | unknown function | unknown function | -1 | 48675 | 48794 |
| YP_009287805.1 | NC_031078_p21 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 15175 | 16032 |
| YP_009287837.1 | NC_031078_p53 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 36650 | 37369 |
| YP_009287851.1 | NC_031078_p67 | hypothetical protein | phrog_3908 | unknown function | unknown function | -1 | 45526 | 45729 |
| YP_009287810.1 | NC_031078_p26 | hypothetical protein | phrog_988 | tail protein | tail | 1 | 19889 | 21238 |
| YP_009287791.1 | NC_031078_p7 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 2127 | 2552 |
| YP_009287849.1 | NC_031078_p65 | hypothetical protein | phrog_5209 | unknown function | unknown function | -1 | 44562 | 44867 |
| YP_009287808.1 | NC_031078_p24 | hypothetical protein | phrog_4013 | unknown function | unknown function | 1 | 17550 | 19367 |
| YP_009287820.1 | NC_031078_p36 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 26328 | 26813 |
| YP_009287852.1 | NC_031078_p68 | hypothetical protein | phrog_4239 | unknown function | unknown function | -1 | 45732 | 46151 |
| YP_009287806.1 | NC_031078_p22 | minor tail protein | phrog_538 | minor tail protein | tail | 1 | 16037 | 17248 |
| YP_009287856.1 | NC_031078_p72 | hypothetical protein | phrog_4313 | unknown function | unknown function | -1 | 47185 | 48012 |
| YP_009287803.1 | NC_031078_p19 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 11129 | 11452 |
| YP_009287855.1 | NC_031078_p71 | hypothetical protein | phrog_4275 | unknown function | unknown function | -1 | 46954 | 47085 |
| YP_009287811.1 | NC_031078_p27 | hypothetical protein | phrog_3534 | unknown function | unknown function | 1 | 21238 | 21588 |
| YP_009287822.1 | NC_031078_p38 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27697 | 28059 |
| YP_009287828.1 | NC_031078_p44 | hypothetical protein | phrog_3979 | unknown function | unknown function | 1 | 29648 | 29866 |
| YP_009287795.1 | NC_031078_p11 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 6798 | 7337 |
| YP_009287850.1 | NC_031078_p66 | HNH endonuclease | phrog_4842 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 44961 | 45425 |
| YP_009287829.1 | NC_031078_p45 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29859 | 31049 |
| YP_009287813.1 | NC_031078_p29 | hypothetical protein | phrog_4092 | unknown function | unknown function | 1 | 22564 | 22827 |
| YP_009287824.1 | NC_031078_p40 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28195 | 28632 |
| YP_009287801.1 | NC_031078_p17 | hypothetical protein | phrog_117 | major tail protein | tail | 1 | 10256 | 11008 |
| YP_009287814.1 | NC_031078_p30 | hypothetical protein | phrog_4061 | unknown function | unknown function | -1 | 22875 | 23144 |
| YP_009287838.1 | NC_031078_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37366 | 37473 |
| YP_009287807.1 | NC_031078_p23 | hypothetical protein | phrog_1276 | unknown function | unknown function | 1 | 17252 | 17548 |
| YP_009287830.1 | NC_031078_p46 | hypothetical protein | phrog_1340 | unknown function | unknown function | 1 | 31082 | 31435 |