| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031094 |
Definition |
Streptococcus virus 9872, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
33105 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
36.84 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009289395.1 | NC_031094_p43 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 29521 | 30009 |
| YP_009289392.1 | NC_031094_p40 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 28902 | 29072 |
| YP_009289368.1 | NC_031094_p16 | distal tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 11677 | 12438 |
| YP_009289367.1 | NC_031094_p15 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8917 | 11667 |
| YP_009289378.1 | NC_031094_p26 | Cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 20791 | 20994 |
| YP_009289369.1 | NC_031094_p17 | tail-associated lysin | phrog_1067 | minor head protein | head and packaging | 1 | 12438 | 15170 |
| YP_009289376.1 | NC_031094_p24 | lysin | phrog_4238 | endolysin | lysis | 1 | 19987 | 20214 |
| YP_009289381.1 | NC_031094_p29 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 22287 | 22478 |
| YP_009289371.1 | NC_031094_p19 | serine acetyltransferase | phrog_2154 | unknown function | unknown function | 1 | 17201 | 17728 |
| YP_009289388.1 | NC_031094_p36 | hypothetical protein | phrog_4400 | unknown function | unknown function | 1 | 26709 | 27353 |
| YP_009289398.1 | NC_031094_p46 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 31270 | 31560 |
| YP_009289374.1 | NC_031094_p22 | lysin | phrog_998 | endolysin | lysis | 1 | 18355 | 18957 |
| YP_009289355.1 | NC_031094_p3 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 1975 | 3315 |
| YP_009289387.1 | NC_031094_p35 | nuclease | phrog_1227 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 25833 | 26669 |
| YP_009289400.1 | NC_031094_p48 | hypothetical protein | phrog_11378 | unknown function | unknown function | -1 | 32337 | 32492 |
| YP_009289366.1 | NC_031094_p14 | hypothetical protein | phrog_441 | tail assembly chaperone | tail | 1 | 8632 | 8901 |
| YP_009289377.1 | NC_031094_p25 | hypothetical protein | phrog_11088 | unknown function | unknown function | 1 | 20280 | 20417 |
| YP_009289389.1 | NC_031094_p37 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 27368 | 27814 |
| YP_009289361.1 | NC_031094_p9 | hypothetical protein | phrog_348 | minor head protein | head and packaging | 1 | 6554 | 6865 |
| YP_009289396.1 | NC_031094_p44 | DNA-binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30010 | 30522 |
| YP_009289390.1 | NC_031094_p38 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 27829 | 28383 |
| YP_009289375.1 | NC_031094_p23 | endonuclease | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 19164 | 19925 |
| YP_009289379.1 | NC_031094_p27 | hypothetical protein | phrog_26898 | unknown function | unknown function | 1 | 21044 | 21337 |
| YP_009289393.1 | NC_031094_p41 | hypothetical protein | phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 29063 | 29236 |
| YP_009289401.1 | NC_031094_p49 | late transcriptional regulator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 32651 | 33049 |
| YP_009289353.1 | NC_031094_p1 | hypothetical protein | phrog_2538 | terminase small subunit | head and packaging | 1 | 180 | 593 |
| YP_009289358.1 | NC_031094_p6 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 5091 | 5954 |
| YP_009289373.1 | NC_031094_p21 | holin | phrog_297 | holin | lysis | 1 | 18111 | 18353 |
| YP_009289356.1 | NC_031094_p4 | minor capsid protein | phrog_115 | minor head protein | head and packaging | 1 | 3319 | 4359 |
| YP_009289380.1 | NC_031094_p28 | antirepressor | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 21350 | 22096 |
| YP_009289386.1 | NC_031094_p34 | RecT recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 25013 | 25840 |
| YP_009289397.1 | NC_031094_p45 | DNA methyltransferase | phrog_2882 | DNA methyltransferase | other | 1 | 30525 | 31337 |
| YP_009289359.1 | NC_031094_p7 | hypothetical protein | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 6020 | 6211 |
| YP_009289364.1 | NC_031094_p12 | major tail protein | phrog_238 | major tail protein | tail | 1 | 7585 | 8088 |
| YP_009289360.1 | NC_031094_p8 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 6225 | 6557 |
| YP_009289391.1 | NC_031094_p39 | endodeoxyribonuclease RusA | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28380 | 28841 |
| YP_009289399.1 | NC_031094_p47 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 31564 | 32271 |
| YP_009289363.1 | NC_031094_p11 | tail terminator protein | phrog_176 | tail terminator | connector | 1 | 7185 | 7574 |
| YP_009289357.1 | NC_031094_p5 | scaffolding protein | phrog_2932 | head scaffolding protein | head and packaging | 1 | 4476 | 5075 |
| YP_009289362.1 | NC_031094_p10 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6862 | 7188 |
| YP_009289365.1 | NC_031094_p13 | tail chaperone protein | phrog_183 | tail chaperone protein | tail | 1 | 8198 | 8548 |
| YP_009289370.1 | NC_031094_p18 | antireceptor | phrog_15175 | virion structural protein | head and packaging | 1 | 15182 | 17125 |
| YP_009289385.1 | NC_031094_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24721 | 24888 |
| YP_009289372.1 | NC_031094_p20 | holin | phrog_689 | holin | lysis | 1 | 17861 | 18085 |
| YP_009289382.1 | NC_031094_p30 | DNA replication protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 22802 | 23611 |
| YP_009289383.1 | NC_031094_p31 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 23623 | 24405 |
| YP_009289384.1 | NC_031094_p32 | hypothetical protein | phrog_3159 | unknown function | unknown function | 1 | 24402 | 24596 |
| YP_009289354.1 | NC_031094_p2 | TerL | phrog_38 | terminase large subunit | head and packaging | 1 | 586 | 1974 |
| YP_009289394.1 | NC_031094_p42 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 29233 | 29388 |