Genomic map of Gordonia phage Zirinka (NC_031097)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031097
Definition
Gordonia phage Zirinka, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nymbaxtervirinae; Nymphadoravirus.
DB of origin
REFSEQ
Length
52077
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
66.66
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009289670.1 NC_031097_p10 hypothetical protein phrog_556 minor head protein head and packaging 1 7709 8038
YP_009289723.1 NC_031097_p63 hypothetical protein phrog_16050 unknown function unknown function 1 45085 45252
YP_009289661.1 NC_031097_p1 terminase small subunit phrog_83 terminase small subunit head and packaging 1 56 520
YP_009289677.1 NC_031097_p17 tape measure protein phrog_7025 tail length tape measure protein tail 1 10512 16952
YP_009289665.1 NC_031097_p5 capsid maturation protease phrog_80 head maturation protease head and packaging 1 3785 4696
YP_009289683.1 NC_031097_p23 membrane protein phrog_1298 minor tail protein tail 1 21439 21921
YP_009289711.1 NC_031097_p51 hypothetical protein phrog_6877 unknown function unknown function 1 38796 39158
YP_009289704.1 NC_031097_p44 hypothetical protein phrog_17511 unknown function unknown function 1 35493 35921
YP_009289732.1 NC_031097_p72 hypothetical protein singleton unknown function unknown function 1 49392 49634
YP_009289664.1 NC_031097_p4 portal protein phrog_12 portal protein head and packaging 1 2377 3795
YP_009289727.1 NC_031097_p67 hypothetical protein phrog_6055 unknown function unknown function 1 47483 47977
YP_009289738.1 NC_031097_p78 hypothetical protein phrog_10381 unknown function unknown function 1 51386 51694
YP_009289728.1 NC_031097_p68 hypothetical protein phrog_14741 unknown function unknown function 1 47974 48228
YP_009289668.1 NC_031097_p8 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 6774 7319
YP_009289701.1 NC_031097_p41 immunity repressor phrog_6288 unknown function unknown function -1 33950 34855
YP_009289672.1 NC_031097_p12 major tail protein phrog_3884 major tail protein tail 1 8478 8990
YP_009289730.1 NC_031097_p70 hypothetical protein phrog_14446 unknown function unknown function 1 48587 49099
YP_009289710.1 NC_031097_p50 hypothetical protein phrog_210 unknown function unknown function 1 37948 38799
YP_009289680.1 NC_031097_p20 lysin A, L-Ala-D-Glu peptidase domain phrog_1512 endolysin lysis 1 19469 20173
YP_009289703.1 NC_031097_p43 hypothetical protein phrog_16839 unknown function unknown function 1 35338 35496
YP_009289720.1 NC_031097_p60 DNA methylase phrog_116 DNA methyltransferase other 1 42783 44363
YP_009289667.1 NC_031097_p7 head-to-tail connector protein phrog_9538 head-tail connector protein connector 1 6430 6777
YP_009289722.1 NC_031097_p62 hypothetical protein singleton unknown function unknown function -1 44790 45077
YP_009289673.1 NC_031097_p13 hypothetical protein phrog_17334 unknown function unknown function 1 9049 9222
YP_009289713.1 NC_031097_p53 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 39460 40335
YP_009289700.1 NC_031097_p40 hypothetical protein phrog_87 metallo-protease other -1 33471 33887
YP_009289719.1 NC_031097_p59 hypothetical protein phrog_7793 unknown function unknown function 1 42646 42786
YP_009289714.1 NC_031097_p54 ssDNA binding protein phrog_4171 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 40332 41480
YP_009289734.1 NC_031097_p74 HTH DNA binding domain protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 50293 50619
YP_009289691.1 NC_031097_p31 hypothetical protein singleton unknown function unknown function -1 27955 28206
YP_009289671.1 NC_031097_p11 head-to-tail connector protein phrog_2595 head-tail connector protein connector 1 8035 8475
YP_009289729.1 NC_031097_p69 resolvase phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 48225 48590
YP_009289698.1 NC_031097_p38 hypothetical protein phrog_19414 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 32858 33172
YP_009289678.1 NC_031097_p18 minor tail protein phrog_106 minor tail protein tail 1 16952 17779
YP_009289690.1 NC_031097_p30 hypothetical protein singleton unknown function unknown function -1 27699 27833
YP_009289707.1 NC_031097_p47 hypothetical protein phrog_1840 excisionase integration and excision 1 37027 37317
YP_009289724.1 NC_031097_p64 hypothetical protein phrog_2045 unknown function unknown function 1 45252 46211
YP_009289679.1 NC_031097_p19 minor tail protein phrog_110 minor tail protein tail 1 17776 19374
YP_009289705.1 NC_031097_p45 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 35970 36806
YP_009289669.1 NC_031097_p9 head-to-tail connector protein phrog_3881 head-tail connector protein connector 1 7329 7697
YP_009289715.1 NC_031097_p55 hypothetical protein phrog_15664 unknown function unknown function 1 41477 41926
YP_009289689.1 NC_031097_p29 hypothetical protein phrog_7114 minor tail protein tail 1 27062 27658
YP_009289699.1 NC_031097_p39 hypothetical protein phrog_5316 unknown function unknown function -1 33250 33471
YP_009289693.1 NC_031097_p33 hypothetical protein phrog_18428 unknown function unknown function -1 29858 30211
YP_009289666.1 NC_031097_p6 major capsid protein phrog_10 major head protein head and packaging 1 4693 6342
YP_009289676.1 NC_031097_p16 hypothetical protein phrog_2320 unknown function unknown function -1 10161 10478
YP_009289706.1 NC_031097_p46 hypothetical protein phrog_7723 unknown function unknown function 1 36803 37030
YP_009289686.1 NC_031097_p26 minor tail protein phrog_2689 minor tail protein tail 1 22938 24443
YP_009289726.1 NC_031097_p66 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 46410 47486
YP_009289702.1 NC_031097_p42 HTH DNA binding domain protein phrog_6463 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 35090 35341
YP_009289739.1 NC_031097_p79 HNH endonuclease phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 51694 52026
YP_009289718.1 NC_031097_p58 ASC-1 superfamily protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 42299 42649
YP_009289736.1 NC_031097_p76 hypothetical protein phrog_17450 unknown function unknown function 1 50929 51261
YP_009289663.1 NC_031097_p3 hypothetical protein phrog_4810 unknown function unknown function 1 2219 2380
YP_009289685.1 NC_031097_p25 lysin B phrog_102 endolysin lysis 1 22321 22938
YP_009289716.1 NC_031097_p56 hypothetical protein phrog_10709 unknown function unknown function 1 41935 42105
YP_009289674.1 NC_031097_p15 tail assembly chaperone phrog_3860 tail assembly chaperone tail 1 9285 9932
YP_009289737.1 NC_031097_p77 hypothetical protein phrog_15735 unknown function unknown function 1 51261 51386
YP_009289697.1 NC_031097_p37 hypothetical protein phrog_21927 unknown function unknown function -1 32400 32714
YP_009289675.2 NC_031097_p14 tail assembly chaperone phrog_3860 tail assembly chaperone tail 1 9285 10189
YP_009289709.1 NC_031097_p49 hypothetical protein phrog_204 unknown function unknown function 1 37603 37944
YP_009289725.1 NC_031097_p65 hypothetical protein phrog_10621 unknown function unknown function 1 46211 46420
YP_009289733.1 NC_031097_p73 hypothetical protein phrog_1467 unknown function unknown function 1 49631 50296
YP_009289731.1 NC_031097_p71 hypothetical protein phrog_25240 unknown function unknown function 1 49096 49392
YP_009289681.1 NC_031097_p21 lysin A, peptidase domain phrog_3084 endolysin lysis 1 20173 21084
YP_009289695.1 NC_031097_p35 hypothetical protein phrog_31563 unknown function unknown function -1 30498 31004
YP_009289662.1 NC_031097_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 498 2222
YP_009289717.1 NC_031097_p57 hypothetical protein phrog_20668 unknown function unknown function 1 42102 42302
YP_009289687.1 NC_031097_p27 hypothetical protein phrog_13955 unknown function unknown function 1 24440 24823
YP_009289712.1 NC_031097_p52 hypothetical protein phrog_2857 tail fiber protein tail 1 39155 39463
YP_009289688.1 NC_031097_p28 minor tail protein phrog_8780 minor tail protein tail 1 24801 27062
YP_009289721.1 NC_031097_p61 hypothetical protein phrog_32254 unknown function unknown function -1 44369 44713
YP_009289694.1 NC_031097_p34 toxin phrog_17063 toxin moron, auxiliary metabolic gene and host takeover -1 30208 30444
YP_009289696.1 NC_031097_p36 integrase phrog_1 integrase integration and excision 1 31303 32385
YP_009289684.1 NC_031097_p24 membrane protein phrog_726 unknown function unknown function 1 21911 22324
YP_009289682.1 NC_031097_p22 membrane protein phrog_565 holin lysis 1 21086 21442
YP_009289735.1 NC_031097_p75 hypothetical protein phrog_9543 unknown function unknown function 1 50616 50942
YP_009289708.1 NC_031097_p48 hypothetical protein phrog_9213 unknown function unknown function 1 37314 37517
YP_009289692.1 NC_031097_p32 hypothetical protein singleton unknown function unknown function 1 29288 29614