| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031099 |
Definition |
Gordonia phage Hedwig, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Hedwigvirus; Gordonia virus Hedwig. |
DB of origin |
REFSEQ |
Length |
44536 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
70 |
%GC |
67.19 |
Number of singletons |
15 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009289859.1 | NC_031099_p50 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 34705 | 34995 |
| YP_009289817.1 | NC_031099_p8 | head-to-tail connector protein | phrog_2322 | head-tail connector protein | connector | 1 | 6478 | 6846 |
| YP_009289868.1 | NC_031099_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39185 | 39433 |
| YP_009289855.1 | NC_031099_p46 | hypothetical protein | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 32887 | 33687 |
| YP_009289844.1 | NC_031099_p35 | hypothetical protein | phrog_5392 | unknown function | unknown function | -1 | 28639 | 28932 |
| YP_009289873.1 | NC_031099_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41726 | 41971 |
| YP_009289827.1 | NC_031099_p18 | tape measure protein | phrog_4197 | tail length tape measure protein | tail | 1 | 11001 | 16013 |
| YP_009289857.1 | NC_031099_p48 | hypothetical protein | phrog_20407 | unknown function | unknown function | 1 | 33963 | 34328 |
| YP_009289836.1 | NC_031099_p27 | hypothetical protein | phrog_19565 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 22063 | 22440 |
| YP_009289874.1 | NC_031099_p65 | hypothetical protein | phrog_2131 | unknown function | unknown function | 1 | 42039 | 42533 |
| YP_009289853.1 | NC_031099_p44 | HTH DNA binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 32388 | 32588 |
| YP_009289852.1 | NC_031099_p43 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 31846 | 32226 |
| YP_009289848.1 | NC_031099_p39 | hypothetical protein | phrog_26576 | unknown function | unknown function | -1 | 29919 | 30227 |
| YP_009289828.1 | NC_031099_p19 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16010 | 16957 |
| YP_009289810.1 | NC_031099_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 228 | 614 |
| YP_009289825.1 | NC_031099_p16 | tail assembly chaperone | phrog_5813 | tail assembly chaperone | tail | 1 | 10100 | 10513 |
| YP_009289879.1 | NC_031099_p70 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44137 | 44487 |
| YP_009289815.1 | NC_031099_p6 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 5167 | 5529 |
| YP_009289835.1 | NC_031099_p26 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 21613 | 22059 |
| YP_009289811.1 | NC_031099_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 586 | 2196 |
| YP_009289814.1 | NC_031099_p5 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3934 | 5163 |
| YP_009289869.1 | NC_031099_p60 | hypothetical protein | phrog_33049 | unknown function | unknown function | 1 | 39430 | 39711 |
| YP_009289856.1 | NC_031099_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33703 | 33942 |
| YP_009289830.1 | NC_031099_p21 | hypothetical protein | phrog_22223 | unknown function | unknown function | 1 | 18659 | 19138 |
| YP_009289819.1 | NC_031099_p10 | head-to-tail connector protein | phrog_501 | head closure Hc1 | connector | 1 | 7238 | 7573 |
| YP_009289839.1 | NC_031099_p30 | hypothetical protein | phrog_8055 | unknown function | unknown function | 1 | 25012 | 25329 |
| YP_009289843.1 | NC_031099_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28350 | 28508 |
| YP_009289812.1 | NC_031099_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2211 | 3575 |
| YP_009289829.1 | NC_031099_p20 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16954 | 18648 |
| YP_009289832.1 | NC_031099_p23 | lysin A, GH19 glycoside hydrolase domain | phrog_34417 | unknown function | unknown function | 1 | 19879 | 20799 |
| YP_009289813.1 | NC_031099_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3569 | 3937 |
| YP_009289864.1 | NC_031099_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37197 | 37484 |
| YP_009289833.1 | NC_031099_p24 | membrane protein | phrog_9752 | holin | lysis | 1 | 20796 | 21194 |
| YP_009289854.1 | NC_031099_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32585 | 32887 |
| YP_009289822.1 | NC_031099_p13 | major tail protein | phrog_10909 | major tail protein | tail | 1 | 8342 | 9184 |
| YP_009289871.1 | NC_031099_p62 | hypothetical protein | phrog_16850 | unknown function | unknown function | 1 | 39946 | 40287 |
| YP_009289867.1 | NC_031099_p58 | hypothetical protein | phrog_20160 | unknown function | unknown function | 1 | 38868 | 39188 |
| YP_009289851.1 | NC_031099_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31562 | 31849 |
| YP_009289837.1 | NC_031099_p28 | lysin B | phrog_102 | endolysin | lysis | 1 | 22437 | 23138 |
| YP_009289858.1 | NC_031099_p49 | hypothetical protein | phrog_20805 | unknown function | unknown function | 1 | 34331 | 34654 |
| YP_009289876.1 | NC_031099_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42882 | 43121 |
| YP_009289831.1 | NC_031099_p22 | lysin A, cysteine protease domain | phrog_6007 | endolysin | lysis | 1 | 19226 | 19879 |
| YP_009289842.1 | NC_031099_p33 | hypothetical protein | phrog_29359 | unknown function | unknown function | -1 | 28041 | 28205 |
| YP_009289824.1 | NC_031099_p15 | tail assembly chaperone | phrog_17338 | tail assembly chaperone | tail | 1 | 9612 | 10103 |
| YP_009289870.1 | NC_031099_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39713 | 39928 |
| YP_009289863.1 | NC_031099_p54 | DNA binding protein | phrog_6218 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 35639 | 37207 |
| YP_009289821.1 | NC_031099_p12 | hypothetical protein | phrog_6485 | tail terminator | connector | 1 | 7867 | 8259 |
| YP_009289820.1 | NC_031099_p11 | hypothetical protein | phrog_8079 | neck protein | connector | 1 | 7580 | 7870 |
| YP_009289877.1 | NC_031099_p68 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 43118 | 43780 |
| YP_009289846.1 | NC_031099_p37 | hypothetical protein | phrog_6153 | unknown function | unknown function | -1 | 29349 | 29585 |
| YP_009289875.1 | NC_031099_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42526 | 42885 |
| YP_009289826.1 | NC_031099_p17 | hypothetical protein | phrog_25082 | unknown function | unknown function | 1 | 10529 | 10948 |
| YP_009289861.1 | NC_031099_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35129 | 35389 |
| YP_009289840.1 | NC_031099_p31 | minor tail protein | phrog_25867 | tail protein | tail | 1 | 25332 | 27116 |
| YP_009289850.1 | NC_031099_p41 | integrase | phrog_1 | integrase | integration and excision | -1 | 30632 | 31459 |
| YP_009289834.1 | NC_031099_p25 | membrane protein | phrog_2272 | unknown function | unknown function | 1 | 21191 | 21613 |
| YP_009289845.1 | NC_031099_p36 | hypothetical protein | phrog_6506 | Arc-like repressor | transcription regulation | 1 | 29107 | 29304 |
| YP_009289849.1 | NC_031099_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30404 | 30619 |
| YP_009289838.1 | NC_031099_p29 | minor tail protein | phrog_737 | minor tail protein | tail | 1 | 23135 | 25012 |
| YP_009289841.1 | NC_031099_p32 | hypothetical protein | phrog_10356 | virion structural protein | head and packaging | 1 | 27130 | 28059 |
| YP_009289872.1 | NC_031099_p63 | HNH endonuclease domain protein | phrog_15463 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 40287 | 41729 |
| YP_009289862.1 | NC_031099_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35415 | 35609 |
| YP_009289860.1 | NC_031099_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34992 | 35132 |
| YP_009289816.1 | NC_031099_p7 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5561 | 6481 |
| YP_009289823.1 | NC_031099_p14 | hypothetical protein | phrog_18254 | unknown function | unknown function | 1 | 9184 | 9579 |
| YP_009289847.1 | NC_031099_p38 | hypothetical protein | phrog_22338 | unknown function | unknown function | -1 | 29608 | 29922 |
| YP_009289878.1 | NC_031099_p69 | HTH DNA binding protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 43790 | 44137 |
| YP_009289865.1 | NC_031099_p56 | DNA translocase | phrog_12598 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 37493 | 38512 |
| YP_009289818.1 | NC_031099_p9 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6888 | 7238 |
| YP_009289866.1 | NC_031099_p57 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38509 | 38871 |