Genomic map of Mycobacterium phage Sneeze (NC_031102)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031102
Definition
Mycobacterium phage Sneeze, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Liefievirus; unclassified Liefievirus.
DB of origin
REFSEQ
Length
42429
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
64
%GC
66.45
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009290235.1 NC_031102_p33 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 28996 29529
YP_009290241.1 NC_031102_p39 activating signal cointegrator-like protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 31162 31515
YP_009290224.1 NC_031102_p22 minor tail protein phrog_7565 minor tail protein tail 1 20525 22918
YP_009290214.1 NC_031102_p12 head-to-tail connector protein phrog_123 tail terminator connector 1 9396 9839
YP_009290254.1 NC_031102_p52 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 37052 37639
YP_009290225.1 NC_031102_p23 hypothetical protein phrog_7598 unknown function unknown function 1 22935 23255
YP_009290211.1 NC_031102_p9 head-to-tail connector protein phrog_1290 head-tail adaptor connector 1 8296 8793
YP_009290212.1 NC_031102_p10 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 8793 9149
YP_009290258.1 NC_031102_p56 hypothetical protein phrog_7600 unknown function unknown function 1 38634 39053
YP_009290252.1 NC_031102_p50 hypothetical protein phrog_2247 unknown function unknown function 1 36358 36717
YP_009290237.1 NC_031102_p35 hypothetical protein phrog_5081 unknown function unknown function 1 29834 30232
YP_009290248.1 NC_031102_p46 hypothetical protein phrog_7227 unknown function unknown function 1 34743 35276
YP_009290220.1 NC_031102_p18 minor tail protein phrog_110 minor tail protein tail 1 16647 18410
YP_009290207.1 NC_031102_p5 hypothetical protein phrog_1757 unknown function unknown function 1 6189 6395
YP_009290219.1 NC_031102_p17 minor tail protein phrog_106 minor tail protein tail 1 15478 16656
YP_009290205.1 NC_031102_p3 portal protein phrog_104 portal protein head and packaging 1 1888 3402
YP_009290238.1 NC_031102_p36 hypothetical protein phrog_549 unknown function unknown function 1 30232 30825
YP_009290206.1 NC_031102_p4 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 3403 6192
YP_009290227.1 NC_031102_p25 hypothetical protein phrog_9511 unknown function unknown function 1 23440 23712
YP_009290215.1 NC_031102_p13 major tail protein phrog_117 major tail protein tail 1 9836 10456
YP_009290229.1 NC_031102_p27 lysin A phrog_880 endolysin lysis 1 23967 25283
YP_009290255.1 NC_031102_p53 hypothetical protein phrog_16002 unknown function unknown function 1 37612 38061
YP_009290245.1 NC_031102_p43 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 32094 33179
YP_009290260.1 NC_031102_p58 hypothetical protein phrog_5436 unknown function unknown function 1 39342 40154
YP_009290222.1 NC_031102_p20 minor tail protein phrog_1565 minor tail protein tail 1 18946 20082
YP_009290239.1 NC_031102_p37 hypothetical protein phrog_3821 unknown function unknown function 1 30822 30998
YP_009290213.1 NC_031102_p11 head-to-tail connector protein phrog_387 neck protein connector 1 9136 9399
YP_009290203.1 NC_031102_p1 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 43 387
YP_009290217.1 NC_031102_p15 tail assembly chaperone phrog_1861 unknown function unknown function 1 10555 11067
YP_009290249.1 NC_031102_p47 hypothetical protein phrog_3926 replication initiation protein DNA, RNA and nucleotide metabolism 1 35477 35848
YP_009290240.1 NC_031102_p38 hypothetical protein singleton unknown function unknown function 1 30995 31165
YP_009290228.1 NC_031102_p26 hypothetical protein phrog_8517 unknown function unknown function 1 23712 23906
YP_009290253.1 NC_031102_p51 hypothetical protein phrog_7576 unknown function unknown function 1 36714 37055
YP_009290209.1 NC_031102_p7 major capsid protein phrog_10 major head protein head and packaging 1 7098 8033
YP_009290232.1 NC_031102_p30 hypothetical protein phrog_1177 unknown function unknown function 1 26872 27192
YP_009290208.1 NC_031102_p6 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 6514 7056
YP_009290223.1 NC_031102_p21 minor tail protein phrog_1736 minor tail protein tail 1 20094 20525
YP_009290247.1 NC_031102_p45 hypothetical protein phrog_26515 unknown function unknown function 1 34570 34740
YP_009290251.1 NC_031102_p49 hypothetical protein phrog_7826 unknown function unknown function 1 36047 36361
YP_009290250.1 NC_031102_p48 hypothetical protein phrog_21970 unknown function unknown function 1 35856 36050
YP_009290231.1 NC_031102_p29 holin phrog_7198 holin lysis 1 26517 26867
YP_009290244.1 NC_031102_p42 hypothetical protein phrog_6734 unknown function unknown function 1 31924 32097
YP_009290265.1 NC_031102_p63 hypothetical protein phrog_12283 unknown function unknown function 1 41558 41917
YP_009290246.1 NC_031102_p44 ssDNA binding protein phrog_4171 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 33197 34573
YP_009290233.1 NC_031102_p31 hypothetical protein phrog_798 unknown function unknown function 1 27189 27806
YP_009290264.1 NC_031102_p62 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41199 41525
YP_009290221.1 NC_031102_p19 minor tail protein phrog_1697 minor tail protein tail 1 18410 18949
YP_009290216.1 NC_031102_p14 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 10555 11453
YP_009290234.1 NC_031102_p32 integrase phrog_1 integrase integration and excision -1 27803 28999
YP_009290259.1 NC_031102_p57 hypothetical protein phrog_25223 unknown function unknown function 1 39133 39276
YP_009290243.1 NC_031102_p41 hypothetical protein phrog_7392 unknown function unknown function 1 31661 31924
YP_009290204.1 NC_031102_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 455 1891
YP_009290262.1 NC_031102_p60 hypothetical protein phrog_658 unknown function unknown function 1 40506 40841
YP_009290230.1 NC_031102_p28 lysin B phrog_102 endolysin lysis 1 25283 26491
YP_009290261.1 NC_031102_p59 hypothetical protein phrog_38702 unknown function unknown function 1 40154 40474
YP_009290257.1 NC_031102_p55 hypothetical protein phrog_10006 unknown function unknown function 1 38474 38632
YP_009290242.1 NC_031102_p40 hypothetical protein phrog_7486 unknown function unknown function 1 31512 31661
YP_009290226.1 NC_031102_p24 hypothetical protein phrog_8923 unknown function unknown function 1 23258 23440
YP_009290256.1 NC_031102_p54 hypothetical protein phrog_9043 unknown function unknown function 1 38058 38477
YP_009290266.1 NC_031102_p64 hypothetical protein phrog_2074 unknown function unknown function 1 41914 42165
YP_009290210.1 NC_031102_p8 head-to-tail connector protein phrog_3101 unknown function unknown function 1 8070 8285
YP_009290263.1 NC_031102_p61 hypothetical protein phrog_7328 unknown function unknown function 1 40940 41173
YP_009290236.1 NC_031102_p34 recombination directionality factor phrog_7506 recombination directionality factor integration and excision 1 29580 29837
YP_009290218.1 NC_031102_p16 tape measure protein phrog_971 endolysin lysis 1 11453 15478