| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031102 |
Definition |
Mycobacterium phage Sneeze, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Liefievirus; unclassified Liefievirus. |
DB of origin |
REFSEQ |
Length |
42429 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
64 |
%GC |
66.45 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009290235.1 | NC_031102_p33 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 28996 | 29529 |
| YP_009290241.1 | NC_031102_p39 | activating signal cointegrator-like protein | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 31162 | 31515 |
| YP_009290224.1 | NC_031102_p22 | minor tail protein | phrog_7565 | minor tail protein | tail | 1 | 20525 | 22918 |
| YP_009290214.1 | NC_031102_p12 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 9396 | 9839 |
| YP_009290254.1 | NC_031102_p52 | RuvC-like resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 37052 | 37639 |
| YP_009290225.1 | NC_031102_p23 | hypothetical protein | phrog_7598 | unknown function | unknown function | 1 | 22935 | 23255 |
| YP_009290211.1 | NC_031102_p9 | head-to-tail connector protein | phrog_1290 | head-tail adaptor | connector | 1 | 8296 | 8793 |
| YP_009290212.1 | NC_031102_p10 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 8793 | 9149 |
| YP_009290258.1 | NC_031102_p56 | hypothetical protein | phrog_7600 | unknown function | unknown function | 1 | 38634 | 39053 |
| YP_009290252.1 | NC_031102_p50 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 36358 | 36717 |
| YP_009290237.1 | NC_031102_p35 | hypothetical protein | phrog_5081 | unknown function | unknown function | 1 | 29834 | 30232 |
| YP_009290248.1 | NC_031102_p46 | hypothetical protein | phrog_7227 | unknown function | unknown function | 1 | 34743 | 35276 |
| YP_009290220.1 | NC_031102_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16647 | 18410 |
| YP_009290207.1 | NC_031102_p5 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 6189 | 6395 |
| YP_009290219.1 | NC_031102_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15478 | 16656 |
| YP_009290205.1 | NC_031102_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1888 | 3402 |
| YP_009290238.1 | NC_031102_p36 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 30232 | 30825 |
| YP_009290206.1 | NC_031102_p4 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 3403 | 6192 |
| YP_009290227.1 | NC_031102_p25 | hypothetical protein | phrog_9511 | unknown function | unknown function | 1 | 23440 | 23712 |
| YP_009290215.1 | NC_031102_p13 | major tail protein | phrog_117 | major tail protein | tail | 1 | 9836 | 10456 |
| YP_009290229.1 | NC_031102_p27 | lysin A | phrog_880 | endolysin | lysis | 1 | 23967 | 25283 |
| YP_009290255.1 | NC_031102_p53 | hypothetical protein | phrog_16002 | unknown function | unknown function | 1 | 37612 | 38061 |
| YP_009290245.1 | NC_031102_p43 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 32094 | 33179 |
| YP_009290260.1 | NC_031102_p58 | hypothetical protein | phrog_5436 | unknown function | unknown function | 1 | 39342 | 40154 |
| YP_009290222.1 | NC_031102_p20 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 18946 | 20082 |
| YP_009290239.1 | NC_031102_p37 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 30822 | 30998 |
| YP_009290213.1 | NC_031102_p11 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 9136 | 9399 |
| YP_009290203.1 | NC_031102_p1 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 43 | 387 |
| YP_009290217.1 | NC_031102_p15 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 10555 | 11067 |
| YP_009290249.1 | NC_031102_p47 | hypothetical protein | phrog_3926 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 35477 | 35848 |
| YP_009290240.1 | NC_031102_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30995 | 31165 |
| YP_009290228.1 | NC_031102_p26 | hypothetical protein | phrog_8517 | unknown function | unknown function | 1 | 23712 | 23906 |
| YP_009290253.1 | NC_031102_p51 | hypothetical protein | phrog_7576 | unknown function | unknown function | 1 | 36714 | 37055 |
| YP_009290209.1 | NC_031102_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7098 | 8033 |
| YP_009290232.1 | NC_031102_p30 | hypothetical protein | phrog_1177 | unknown function | unknown function | 1 | 26872 | 27192 |
| YP_009290208.1 | NC_031102_p6 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 6514 | 7056 |
| YP_009290223.1 | NC_031102_p21 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 20094 | 20525 |
| YP_009290247.1 | NC_031102_p45 | hypothetical protein | phrog_26515 | unknown function | unknown function | 1 | 34570 | 34740 |
| YP_009290251.1 | NC_031102_p49 | hypothetical protein | phrog_7826 | unknown function | unknown function | 1 | 36047 | 36361 |
| YP_009290250.1 | NC_031102_p48 | hypothetical protein | phrog_21970 | unknown function | unknown function | 1 | 35856 | 36050 |
| YP_009290231.1 | NC_031102_p29 | holin | phrog_7198 | holin | lysis | 1 | 26517 | 26867 |
| YP_009290244.1 | NC_031102_p42 | hypothetical protein | phrog_6734 | unknown function | unknown function | 1 | 31924 | 32097 |
| YP_009290265.1 | NC_031102_p63 | hypothetical protein | phrog_12283 | unknown function | unknown function | 1 | 41558 | 41917 |
| YP_009290246.1 | NC_031102_p44 | ssDNA binding protein | phrog_4171 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 33197 | 34573 |
| YP_009290233.1 | NC_031102_p31 | hypothetical protein | phrog_798 | unknown function | unknown function | 1 | 27189 | 27806 |
| YP_009290264.1 | NC_031102_p62 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41199 | 41525 |
| YP_009290221.1 | NC_031102_p19 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 18410 | 18949 |
| YP_009290216.1 | NC_031102_p14 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 10555 | 11453 |
| YP_009290234.1 | NC_031102_p32 | integrase | phrog_1 | integrase | integration and excision | -1 | 27803 | 28999 |
| YP_009290259.1 | NC_031102_p57 | hypothetical protein | phrog_25223 | unknown function | unknown function | 1 | 39133 | 39276 |
| YP_009290243.1 | NC_031102_p41 | hypothetical protein | phrog_7392 | unknown function | unknown function | 1 | 31661 | 31924 |
| YP_009290204.1 | NC_031102_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 455 | 1891 |
| YP_009290262.1 | NC_031102_p60 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 40506 | 40841 |
| YP_009290230.1 | NC_031102_p28 | lysin B | phrog_102 | endolysin | lysis | 1 | 25283 | 26491 |
| YP_009290261.1 | NC_031102_p59 | hypothetical protein | phrog_38702 | unknown function | unknown function | 1 | 40154 | 40474 |
| YP_009290257.1 | NC_031102_p55 | hypothetical protein | phrog_10006 | unknown function | unknown function | 1 | 38474 | 38632 |
| YP_009290242.1 | NC_031102_p40 | hypothetical protein | phrog_7486 | unknown function | unknown function | 1 | 31512 | 31661 |
| YP_009290226.1 | NC_031102_p24 | hypothetical protein | phrog_8923 | unknown function | unknown function | 1 | 23258 | 23440 |
| YP_009290256.1 | NC_031102_p54 | hypothetical protein | phrog_9043 | unknown function | unknown function | 1 | 38058 | 38477 |
| YP_009290266.1 | NC_031102_p64 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 41914 | 42165 |
| YP_009290210.1 | NC_031102_p8 | head-to-tail connector protein | phrog_3101 | unknown function | unknown function | 1 | 8070 | 8285 |
| YP_009290263.1 | NC_031102_p61 | hypothetical protein | phrog_7328 | unknown function | unknown function | 1 | 40940 | 41173 |
| YP_009290236.1 | NC_031102_p34 | recombination directionality factor | phrog_7506 | recombination directionality factor | integration and excision | 1 | 29580 | 29837 |
| YP_009290218.1 | NC_031102_p16 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 11453 | 15478 |