Genomic map of Pseudomonas phage vB_PaeP_MAG4 (NC_031104)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031104
Definition
Pseudomonas phage vB_PaeP_MAG4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus.
DB of origin
REFSEQ
Length
72979
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
54.81
Number of singletons
4
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009290564.1 NC_031104_p30 hypothetical protein phrog_26633 unknown function unknown function -1 11742 12038
YP_009290554.1 NC_031104_p20 hypothetical protein phrog_8597 unknown function unknown function 1 6894 7154
YP_009290605.1 NC_031104_p71 hypothetical protein phrog_7891 unknown function unknown function 1 44314 44631
YP_009290560.1 NC_031104_p26 hypothetical protein phrog_7111 unknown function unknown function 1 9544 10170
YP_009290624.1 NC_031104_p90 hypothetical protein phrog_8800 unknown function unknown function 1 70405 70617
YP_009290594.1 NC_031104_p60 hypothetical protein phrog_2452 unknown function unknown function 1 36282 36656
YP_009290539.1 NC_031104_p5 hypothetical protein phrog_7875 unknown function unknown function 1 1547 1798
YP_009290537.1 NC_031104_p3 hypothetical protein phrog_3968 unknown function unknown function 1 1066 1308
YP_009290546.1 NC_031104_p12 hypothetical protein phrog_8570 unknown function unknown function 1 3369 3554
YP_009290577.1 NC_031104_p43 hypothetical protein phrog_8620 unknown function unknown function 1 21898 22296
YP_009290566.1 NC_031104_p32 hypothetical protein phrog_8112 unknown function unknown function 1 12516 12701
YP_009290610.1 NC_031104_p76 hypothetical protein phrog_2220 unknown function unknown function -1 57070 59292
YP_009290547.1 NC_031104_p13 hypothetical protein phrog_6271 toxin moron, auxiliary metabolic gene and host takeover 1 3648 3938
YP_009290559.1 NC_031104_p25 hypothetical protein phrog_6140 unknown function unknown function 1 9316 9540
YP_009290586.1 NC_031104_p52 hypothetical protein phrog_3108 unknown function unknown function -1 28830 29354
YP_009290535.1 NC_031104_p1 hypothetical protein phrog_6483 unknown function unknown function 1 200 454
YP_009290593.1 NC_031104_p59 hypothetical protein phrog_3360 unknown function unknown function 1 35857 36285
YP_009290536.1 NC_031104_p2 hypothetical protein phrog_7624 unknown function unknown function 1 856 1047
YP_009290557.1 NC_031104_p23 DNA-dependent RNA polymerase phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 7752 8993
YP_009290626.1 NC_031104_p92 hypothetical protein phrog_9146 unknown function unknown function 1 70865 71248
YP_009290625.1 NC_031104_p91 hypothetical protein phrog_10651 unknown function unknown function 1 70614 70874
YP_009290558.1 NC_031104_p24 hypothetical protein phrog_8738 unknown function unknown function 1 9091 9243
YP_009290552.1 NC_031104_p18 hypothetical protein phrog_8585 unknown function unknown function 1 5590 5937
YP_009290561.1 NC_031104_p27 hypothetical protein phrog_8613 unknown function unknown function 1 10167 10721
YP_009290584.1 NC_031104_p50 hypothetical protein phrog_8796 unknown function unknown function 1 27701 28258
YP_009290590.1 NC_031104_p56 hypothetical protein phrog_3370 unknown function unknown function -1 33211 33882
YP_009290587.1 NC_031104_p53 hypothetical protein phrog_2687 unknown function unknown function -1 29351 29545
YP_009290592.1 NC_031104_p58 hypothetical protein phrog_496 tail fiber protein tail -1 34175 35464
YP_009290573.1 NC_031104_p39 hypothetical protein phrog_7095 unknown function unknown function 1 17930 18457
YP_009290576.1 NC_031104_p42 cytidine and deoxycytidylate deaminase zinc-binding region phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 21253 21723
YP_009290579.1 NC_031104_p45 DNA topoisomerase VI subunit B phrog_2979 RIIA lysis inhibitor lysis 1 22488 25004
YP_009290544.1 NC_031104_p10 hypothetical protein phrog_8334 unknown function unknown function 1 2845 3078
YP_009290609.1 NC_031104_p75 hypothetical protein phrog_2646 unknown function unknown function -1 56622 57089
YP_009290614.1 NC_031104_p80 hypothetical protein phrog_2120 tail length tape measure protein tail -1 62274 63095
YP_009290620.1 NC_031104_p86 hypothetical protein phrog_2125 virion structural protein head and packaging -1 66799 67533
YP_009290611.1 NC_031104_p77 hypothetical protein phrog_2050 virion structural protein head and packaging -1 59349 60314
YP_009290615.1 NC_031104_p81 hypothetical protein singleton unknown function unknown function -1 63110 63421
YP_009290607.1 NC_031104_p73 hypothetical protein phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 44860 55056
YP_009290608.1 NC_031104_p74 hypothetical protein phrog_6467 unknown function unknown function -1 55057 56622
YP_009290572.1 NC_031104_p38 ATP-dependent RecD-like DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 16764 17930
YP_009290553.1 NC_031104_p19 hypothetical protein phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 5949 6881
YP_009290543.1 NC_031104_p9 hypothetical protein phrog_8885 unknown function unknown function 1 2627 2848
YP_009290623.1 NC_031104_p89 hypothetical protein phrog_9047 unknown function unknown function 1 69974 70405
YP_009290591.1 NC_031104_p57 hypothetical protein phrog_4047 unknown function unknown function -1 33879 34178
YP_009290555.1 NC_031104_p21 hypothetical protein singleton unknown function unknown function 1 7159 7440
YP_009290612.1 NC_031104_p78 hypothetical protein phrog_2130 unknown function unknown function -1 60318 60983
YP_009290613.1 NC_031104_p79 hypothetical protein phrog_1357 major head protein head and packaging -1 61040 62239
YP_009290548.1 NC_031104_p14 hypothetical protein phrog_8775 unknown function unknown function 1 4123 4458
YP_009290569.1 NC_031104_p35 hypothetical protein phrog_1297 ATPase other 1 13848 14918
YP_009290581.1 NC_031104_p47 hypothetical protein phrog_7722 unknown function unknown function 1 26842 27066
YP_009290617.1 NC_031104_p83 hypothetical protein phrog_1216 portal protein head and packaging -1 63829 66009
YP_009290606.1 NC_031104_p72 hypothetical protein phrog_8152 unknown function unknown function 1 44641 44844
YP_009290595.1 NC_031104_p61 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 36658 37668
YP_009290538.1 NC_031104_p4 hypothetical protein phrog_3968 unknown function unknown function 1 1326 1547
YP_009290582.1 NC_031104_p48 hypothetical protein phrog_6854 holin lysis 1 27150 27467
YP_009290540.1 NC_031104_p6 hypothetical protein phrog_2614 unknown function unknown function 1 1802 2110
YP_009290542.1 NC_031104_p8 hypothetical protein phrog_8477 unknown function unknown function 1 2394 2597
YP_009290551.1 NC_031104_p17 hypothetical protein phrog_335 phosphatase other 1 5110 5550
YP_009290570.1 NC_031104_p36 hypothetical protein phrog_14291 unknown function unknown function 1 14930 15448
YP_009290565.1 NC_031104_p31 hypothetical protein singleton unknown function unknown function 1 12277 12507
YP_009290578.1 NC_031104_p44 hypothetical protein phrog_10495 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22293 22484
YP_009290602.1 NC_031104_p68 hypothetical protein phrog_7564 unknown function unknown function 1 42776 43213
YP_009290575.1 NC_031104_p41 hypothetical protein phrog_12945 ferredoxin moron, auxiliary metabolic gene and host takeover 1 21069 21293
YP_009290574.1 NC_031104_p40 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 18457 21072
YP_009290618.1 NC_031104_p84 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 66044 66463
YP_009290567.1 NC_031104_p33 ATP-dependent Clp protease ATP-binding subunit ClpX phrog_5534 unknown function unknown function 1 12744 13577
YP_009290627.1 NC_031104_p93 hypothetical protein phrog_8657 unknown function unknown function 1 71441 72091
YP_009290580.1 NC_031104_p46 hypothetical protein phrog_2886 RIIB lysis inhibitor lysis 1 25016 26794
YP_009290583.1 NC_031104_p49 hypothetical protein phrog_8307 unknown function unknown function 1 27517 27708
YP_009290596.1 NC_031104_p62 hypothetical protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 37683 39851
YP_009290599.1 NC_031104_p65 hypothetical protein phrog_6026 unknown function unknown function 1 41411 41776
YP_009290601.1 NC_031104_p67 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 42204 42764
YP_009290603.1 NC_031104_p69 hypothetical protein phrog_7212 unknown function unknown function 1 43271 43675
YP_009290541.1 NC_031104_p7 hypothetical protein phrog_8449 unknown function unknown function 1 2094 2390
YP_009290568.1 NC_031104_p34 hypothetical protein phrog_4781 unknown function unknown function 1 13574 13816
YP_009290563.1 NC_031104_p29 hypothetical protein phrog_8374 unknown function unknown function 1 11302 11820
YP_009290600.1 NC_031104_p66 hypothetical protein phrog_3934 unknown function unknown function 1 41773 42216
YP_009290597.1 NC_031104_p63 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 39900 40634
YP_009290619.1 NC_031104_p85 hypothetical protein phrog_8880 unknown function unknown function 1 66467 66766
YP_009290622.1 NC_031104_p88 hypothetical protein phrog_2109 unknown function unknown function -1 69179 69907
YP_009290621.1 NC_031104_p87 hypothetical protein phrog_38 terminase large subunit head and packaging -1 67530 69182
YP_009290585.1 NC_031104_p51 hypothetical protein phrog_312 Rz-like spanin lysis -1 28321 28833
YP_009290604.1 NC_031104_p70 hypothetical protein phrog_8394 unknown function unknown function 1 44081 44317
YP_009290589.1 NC_031104_p55 hypothetical protein phrog_7697 tail fiber protein tail -1 29900 33172
YP_009290562.1 NC_031104_p28 hypothetical protein phrog_8451 unknown function unknown function 1 10721 11302
YP_009290598.1 NC_031104_p64 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 40661 41407
YP_009290571.1 NC_031104_p37 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15448 16674
YP_009290628.1 NC_031104_p94 hypothetical protein phrog_6483 unknown function unknown function 1 72510 72764
YP_009290588.1 NC_031104_p54 hypothetical protein singleton unknown function unknown function 1 29679 29987
YP_009290545.1 NC_031104_p11 hypothetical protein phrog_8895 unknown function unknown function 1 3075 3296
YP_009290550.1 NC_031104_p16 hypothetical protein phrog_7756 unknown function unknown function 1 4859 5110
YP_009290556.1 NC_031104_p22 hypothetical protein phrog_8144 unknown function unknown function 1 7445 7717
YP_009290616.1 NC_031104_p82 hypothetical protein phrog_2346 unknown function unknown function -1 63421 63759
YP_009290549.1 NC_031104_p15 hypothetical protein phrog_2072 unknown function unknown function 1 4458 4859