Genomic map of Propionibacterium phage PFR2 (NC_031108)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031108
Definition
Propionibacterium phage PFR2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pulverervirus; unclassified Pulverervirus.
DB of origin
REFSEQ
Length
39640
Host Name
Propionibacterium freudenreichii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
64.95
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009290965.1 NC_031108_p58 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 38905 39420
YP_009290913.1 NC_031108_p6 hypothetical protein phrog_442 head-tail adaptor connector 1 6360 6935
YP_009290961.1 NC_031108_p54 hypothetical protein phrog_9864 unknown function unknown function 1 37329 37559
YP_009290958.1 NC_031108_p51 hypothetical protein phrog_22143 unknown function unknown function 1 35812 36282
YP_009290927.1 NC_031108_p20 hypothetical protein phrog_21056 minor tail protein tail 1 17380 18552
YP_009290914.1 NC_031108_p7 hypothetical protein phrog_501 head closure Hc1 connector 1 6932 7273
YP_009290959.1 NC_031108_p52 single-stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 36419 36892
YP_009290928.1 NC_031108_p21 hypothetical protein phrog_10606 membrane protein moron, auxiliary metabolic gene and host takeover 1 18552 18986
YP_009290955.1 NC_031108_p48 hypothetical protein phrog_23424 unknown function unknown function 1 34327 34572
YP_009290950.1 NC_031108_p43 hypothetical protein phrog_22295 unknown function unknown function 1 31793 32032
YP_009290954.1 NC_031108_p47 hypothetical protein phrog_116 DNA methyltransferase other 1 33284 34330
YP_009290916.1 NC_031108_p9 hypothetical protein phrog_123 tail terminator connector 1 7693 8106
YP_009290929.1 NC_031108_p22 hypothetical protein phrog_12141 unknown function unknown function 1 18983 19258
YP_009290908.1 NC_031108_p1 hypothetical protein phrog_10639 DNA binding protein DNA, RNA and nucleotide metabolism 1 1 396
YP_009290957.1 NC_031108_p50 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 34970 35815
YP_009290963.1 NC_031108_p56 hypothetical protein phrog_18006 unknown function unknown function 1 37759 38061
YP_009290953.1 NC_031108_p46 hypothetical protein phrog_16347 unknown function unknown function 1 32790 33221
YP_009290940.1 NC_031108_p33 hypothetical protein phrog_5931 unknown function unknown function 1 26049 26903
YP_009290941.1 NC_031108_p34 hypothetical protein phrog_6401 DNA binding protein DNA, RNA and nucleotide metabolism 1 26976 27209
YP_009290942.1 NC_031108_p35 hypothetical protein phrog_36710 unknown function unknown function 1 27206 27436
YP_009290947.1 NC_031108_p40 hypothetical protein phrog_11615 DNA binding protein DNA, RNA and nucleotide metabolism 1 30374 30787
YP_009290912.1 NC_031108_p5 hypothetical protein phrog_10 major head protein head and packaging 1 4989 6275
YP_009290956.1 NC_031108_p49 hypothetical protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34553 34948
YP_009290926.1 NC_031108_p19 hypothetical protein phrog_14767 unknown function unknown function 1 16769 17380
YP_009290911.1 NC_031108_p4 hypothetical protein phrog_80 head maturation protease head and packaging 1 4171 4992
YP_009290921.1 NC_031108_p14 hypothetical protein singleton unknown function unknown function 1 10461 10658
YP_009290920.1 NC_031108_p13 hypothetical protein phrog_393 tail assembly chaperone tail 1 10461 11020
YP_009290948.1 NC_031108_p41 DNA methylase phrog_67 DNA methyltransferase other 1 30784 31572
YP_009290938.1 NC_031108_p31 hypothetical protein phrog_4583 transcriptional repressor transcription regulation 1 25061 25333
YP_009290932.1 NC_031108_p25 hypothetical protein phrog_15934 unknown function unknown function -1 20594 21481
YP_009290952.1 NC_031108_p45 hypothetical protein phrog_19369 unknown function unknown function 1 32482 32793
YP_009290945.1 NC_031108_p38 hypothetical protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 29105 29941
YP_009290930.1 NC_031108_p23 hypothetical protein phrog_291 endolysin lysis 1 19303 20139
YP_009290937.1 NC_031108_p30 transcriptional regulator phrog_4583 transcriptional repressor transcription regulation -1 24735 24995
YP_009290951.1 NC_031108_p44 hypothetical protein phrog_33063 unknown function unknown function 1 32271 32480
YP_009290917.1 NC_031108_p10 hypothetical protein phrog_117 major tail protein tail 1 8107 8706
YP_009290934.1 NC_031108_p27 hypothetical protein phrog_27679 unknown function unknown function -1 22015 22464
YP_009290923.1 NC_031108_p16 hypothetical protein phrog_11649 tail protein tail 1 14541 15350
YP_009290964.1 NC_031108_p57 hypothetical protein phrog_8013 unknown function unknown function 1 38048 38752
YP_009290910.1 NC_031108_p3 hypothetical protein phrog_2662 portal protein head and packaging 1 2000 4156
YP_009290909.1 NC_031108_p2 hypothetical protein phrog_9 terminase large subunit head and packaging 1 407 1978
YP_009290925.1 NC_031108_p18 hypothetical protein phrog_15543 unknown function unknown function 1 16516 16755
YP_009290960.1 NC_031108_p53 hypothetical protein phrog_33506 unknown function unknown function 1 36892 37332
YP_009290949.1 NC_031108_p42 hypothetical protein phrog_14680 unknown function unknown function 1 31569 31796
YP_009290918.1 NC_031108_p11 hypothetical protein singleton unknown function unknown function 1 8932 9213
YP_009290935.1 NC_031108_p28 hypothetical protein phrog_1 integrase integration and excision -1 22608 23744
YP_009290939.1 NC_031108_p32 hypothetical protein phrog_29861 unknown function unknown function 1 25330 26049
YP_009290924.1 NC_031108_p17 hypothetical protein phrog_1887 tail protein tail 1 15347 16519
YP_009290946.1 NC_031108_p39 hypothetical protein phrog_472 WhiB transcriptional factor transcription regulation 1 30075 30374
YP_009290922.1 NC_031108_p15 hypothetical protein phrog_971 endolysin lysis 1 11045 14539
YP_009290943.1 NC_031108_p36 hypothetical protein phrog_8332 unknown function unknown function 1 27433 28167
YP_009290944.1 NC_031108_p37 hypothetical protein phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 28203 29108
YP_009290931.1 NC_031108_p24 hypothetical protein phrog_443 holin lysis 1 20136 20474
YP_009290962.1 NC_031108_p55 hypothetical protein phrog_25716 unknown function unknown function 1 37556 37762
YP_009290936.1 NC_031108_p29 hypothetical protein phrog_4980 superinfection exclusion moron, auxiliary metabolic gene and host takeover -1 24083 24553
YP_009290915.1 NC_031108_p8 hypothetical protein phrog_32076 unknown function unknown function 1 7277 7696
YP_009290919.1 NC_031108_p12 hypothetical protein singleton unknown function unknown function 1 9253 10251
YP_009290933.1 NC_031108_p26 hypothetical protein phrog_26193 unknown function unknown function -1 21522 21953