Genomic map of Mycobacterium phage Gompeii16 (NC_031111)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031111
Definition
Mycobacterium phage Gompeii16, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
53623
Host Name
Mycobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
63.55
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009291318.1 NC_031111_p79 hypothetical protein phrog_1387 unknown function unknown function -1 49763 49966
YP_009291270.1 NC_031111_p31 minor tail protein phrog_346 minor tail protein tail 1 24589 26442
YP_009291250.1 NC_031111_p11 terminase phrog_9 terminase large subunit head and packaging 1 7207 8895
YP_009291268.1 NC_031111_p29 minor tail protein phrog_981 minor tail protein tail 1 23873 24220
YP_009291330.1 NC_031111_p91 hypothetical protein phrog_37125 unknown function unknown function -1 52907 53185
YP_009291300.1 NC_031111_p61 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42544 42810
YP_009291277.1 NC_031111_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31504 31776
YP_009291245.1 NC_031111_p6 hypothetical protein phrog_553 minor tail protein tail 1 3571 4185
YP_009291288.1 NC_031111_p49 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36926 37066
YP_009291304.1 NC_031111_p65 hypothetical protein phrog_1705 unknown function unknown function -1 44150 44275
YP_009291271.1 NC_031111_p32 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 26435 27913
YP_009291260.1 NC_031111_p21 major tail protein phrog_117 major tail protein tail 1 15075 15926
YP_009291255.1 NC_031111_p16 head-to-tail connector protein phrog_1857 head-tail connector protein connector 1 12892 13410
YP_009291286.1 NC_031111_p47 hypothetical protein phrog_499 unknown function unknown function -1 35969 36151
YP_009291307.1 NC_031111_p68 exonuclease/helicase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44778 45590
YP_009291266.1 NC_031111_p27 minor tail protein phrog_110 minor tail protein tail 1 21590 23392
YP_009291259.1 NC_031111_p20 head-to-tail connector protein phrog_123 tail terminator connector 1 14620 15066
YP_009291320.1 NC_031111_p81 hypothetical protein phrog_4396 unknown function unknown function -1 50145 50273
YP_009291311.1 NC_031111_p72 hypothetical protein phrog_5947 unknown function unknown function -1 47201 47368
YP_009291258.1 NC_031111_p19 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 14221 14616
YP_009291265.1 NC_031111_p26 minor tail protein phrog_1543 minor tail protein tail 1 21408 21590
YP_009291272.1 NC_031111_p33 hypothetical protein phrog_644 unknown function unknown function 1 28000 28326
YP_009291257.1 NC_031111_p18 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 13859 14221
YP_009291283.1 NC_031111_p44 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33354 35183
YP_009291322.1 NC_031111_p83 hypothetical protein phrog_9043 unknown function unknown function -1 50470 50913
YP_009291314.1 NC_031111_p75 hypothetical protein phrog_1809 unknown function unknown function -1 47990 48385
YP_009291242.1 NC_031111_p3 hypothetical protein phrog_226 minor tail protein tail 1 1166 1606
YP_009291261.1 NC_031111_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16039 16838
YP_009291319.1 NC_031111_p80 hypothetical protein phrog_1155 unknown function unknown function -1 49963 50148
YP_009291306.1 NC_031111_p67 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 44569 44751
YP_009291269.1 NC_031111_p30 minor tail protein phrog_1397 unknown function unknown function 1 24217 24564
YP_009291295.1 NC_031111_p56 hypothetical protein phrog_5801 unknown function unknown function -1 40376 40450
YP_009291323.1 NC_031111_p84 hypothetical protein phrog_8345 unknown function unknown function -1 50910 51116
YP_009291262.1 NC_031111_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16039 16416
YP_009291299.1 NC_031111_p60 hypothetical protein phrog_1019 unknown function unknown function -1 42461 42547
YP_009291273.1 NC_031111_p34 hypothetical protein phrog_1560 unknown function unknown function 1 28336 28527
YP_009291294.1 NC_031111_p55 hypothetical protein phrog_1783 unknown function unknown function -1 40218 40379
YP_009291281.1 NC_031111_p42 hypothetical protein phrog_9480 unknown function unknown function -1 32700 32978
YP_009291264.1 NC_031111_p25 minor tail protein phrog_106 minor tail protein tail 1 19354 21411
YP_009291327.1 NC_031111_p88 hypothetical protein phrog_21527 unknown function unknown function -1 52039 52170
YP_009291244.1 NC_031111_p5 minor tail protein phrog_1197 tail protein tail 1 2491 3561
YP_009291305.1 NC_031111_p66 hypothetical protein phrog_520 unknown function unknown function -1 44272 44565
YP_009291316.1 NC_031111_p77 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 49201 49500
YP_009291309.1 NC_031111_p70 hypothetical protein phrog_4604 unknown function unknown function -1 46637 47098
YP_009291293.1 NC_031111_p54 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39724 40239
YP_009291301.1 NC_031111_p62 hypothetical protein phrog_1941 unknown function unknown function -1 42881 43159
YP_009291279.1 NC_031111_p40 hypothetical protein phrog_15070 unknown function unknown function -1 32441 32539
YP_009291297.1 NC_031111_p58 DNA methylase phrog_67 DNA methyltransferase other -1 40607 41983
YP_009291321.1 NC_031111_p82 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 50270 50440
YP_009291308.1 NC_031111_p69 transposase phrog_4285 transposase integration and excision -1 45587 46297
YP_009291326.1 NC_031111_p87 DNA methylase singleton unknown function unknown function -1 51758 52042
YP_009291263.1 NC_031111_p24 tapemeasure protein phrog_305 tail length tape measure protein tail 1 16850 19330
YP_009291287.1 NC_031111_p48 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36148 36933
YP_009291274.1 NC_031111_p35 hypothetical protein phrog_754 minor tail protein tail 1 28524 29327
YP_009291313.1 NC_031111_p74 hypothetical protein phrog_3851 unknown function unknown function -1 47703 47993
YP_009291317.1 NC_031111_p78 hypothetical protein phrog_1720 unknown function unknown function -1 49497 49766
YP_009291254.1 NC_031111_p15 major capsid protein phrog_10 major head protein head and packaging 1 11794 12813
YP_009291292.1 NC_031111_p53 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39357 39878
YP_009291252.1 NC_031111_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10331 11212
YP_009291291.1 NC_031111_p52 hypothetical protein phrog_474 phosphofructokinase other -1 38962 39360
YP_009291284.1 NC_031111_p45 hypothetical protein phrog_1781 unknown function unknown function -1 35220 35450
YP_009291324.1 NC_031111_p85 hypothetical protein phrog_932 unknown function unknown function -1 51136 51285
YP_009291282.1 NC_031111_p43 hypothetical protein phrog_383 unknown function unknown function -1 32975 33352
YP_009291315.1 NC_031111_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 48427 48939
YP_009291243.1 NC_031111_p4 hypothetical protein phrog_20136 unknown function unknown function 1 1896 2147
YP_009291276.1 NC_031111_p37 integrase phrog_95 integrase integration and excision 1 29884 31383
YP_009291247.1 NC_031111_p8 hypothetical protein phrog_747 unknown function unknown function 1 4539 4796
YP_009291253.1 NC_031111_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11271 11783
YP_009291280.1 NC_031111_p41 hypothetical protein phrog_1860 unknown function unknown function -1 32608 32703
YP_009291289.1 NC_031111_p50 phosphoesterase phrog_221 metallo-phosphoesterase other -1 37071 38789
YP_009291246.1 NC_031111_p7 hypothetical protein phrog_1718 tail protein tail 1 4271 4531
YP_009291296.1 NC_031111_p57 hypothetical protein phrog_397 unknown function unknown function -1 40447 40581
YP_009291325.1 NC_031111_p86 hypothetical protein phrog_14636 unknown function unknown function -1 51286 51456
YP_009291312.1 NC_031111_p73 hypothetical protein phrog_1584 unknown function unknown function -1 47365 47682
YP_009291302.1 NC_031111_p63 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 43159 43980
YP_009291290.1 NC_031111_p51 hypothetical protein phrog_1503 unknown function unknown function -1 38786 38965
YP_009291267.1 NC_031111_p28 minor tail protein phrog_352 minor tail protein tail 1 23430 23876
YP_009291278.1 NC_031111_p39 hypothetical protein phrog_28124 unknown function unknown function -1 31773 32441
YP_009291249.1 NC_031111_p10 lysin B phrog_102 endolysin lysis 1 6219 7187
YP_009291256.1 NC_031111_p17 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 13410 13859
YP_009291248.1 NC_031111_p9 lysin A phrog_317 endolysin lysis 1 4796 6229
YP_009291251.1 NC_031111_p12 portal protein phrog_104 portal protein head and packaging 1 8892 10334
YP_009291275.1 NC_031111_p36 hypothetical protein phrog_411 unknown function unknown function 1 29448 29732
YP_009291303.1 NC_031111_p64 hypothetical protein phrog_2507 unknown function unknown function -1 43980 44153
YP_009291328.1 NC_031111_p89 hypothetical protein phrog_5419 unknown function unknown function -1 52236 52487
YP_009291240.1 NC_031111_p1 hypothetical protein phrog_13643 helicase DNA, RNA and nucleotide metabolism 1 602 838
YP_009291298.1 NC_031111_p59 hndonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 41980 42474
YP_009291241.1 NC_031111_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 835 1131
YP_009291329.1 NC_031111_p90 hypothetical protein phrog_828 unknown function unknown function -1 52620 52910
YP_009291285.1 NC_031111_p46 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35481 35972
YP_009291310.1 NC_031111_p71 hypothetical protein phrog_6068 unknown function unknown function -1 47095 47208