Genomic map of Gordonia phage Phinally (NC_031112)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031112
Definition
Gordonia phage Phinally, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
59265
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
87
%GC
68.43
Number of singletons
23
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009291336.1 NC_031112_p6 hypothetical protein singleton unknown function unknown function 1 4344 5129
YP_009291409.1 NC_031112_p79 exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 55608 56306
YP_009291416.1 NC_031112_p86 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism 1 58578 58829
YP_009291373.1 NC_031112_p43 hypothetical protein phrog_10261 membrane protein moron, auxiliary metabolic gene and host takeover 1 38601 39059
YP_009291348.1 NC_031112_p18 hypothetical protein phrog_18402 head maturation protease head and packaging 1 12130 14892
YP_009291351.1 NC_031112_p21 major capsid protein phrog_777 major head protein head and packaging 1 15336 17255
YP_009291380.1 NC_031112_p50 hypothetical protein phrog_14395 unknown function unknown function 1 43080 43538
YP_009291368.1 NC_031112_p38 hypothetical protein phrog_8780 minor tail protein tail 1 33216 35444
YP_009291397.1 NC_031112_p67 hypothetical protein singleton unknown function unknown function 1 50828 51400
YP_009291390.1 NC_031112_p60 hypothetical protein singleton unknown function unknown function 1 48149 48589
YP_009291339.1 NC_031112_p9 hypothetical protein phrog_21387 unknown function unknown function 1 5687 5851
YP_009291376.1 NC_031112_p46 hypothetical protein phrog_5984 unknown function unknown function 1 40330 40587
YP_009291334.1 NC_031112_p4 hypothetical protein singleton unknown function unknown function 1 2543 2788
YP_009291393.1 NC_031112_p63 hypothetical protein singleton unknown function unknown function 1 49311 49613
YP_009291363.1 NC_031112_p33 minor tail protein phrog_110 minor tail protein tail 1 29134 30759
YP_009291394.1 NC_031112_p64 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 49613 50260
YP_009291401.1 NC_031112_p71 hypothetical protein singleton unknown function unknown function 1 53335 53517
YP_009291331.1 NC_031112_p1 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 1 537
YP_009291396.1 NC_031112_p66 hypothetical protein phrog_23633 unknown function unknown function 1 50619 50831
YP_009291360.1 NC_031112_p30 hypothetical protein phrog_13927 unknown function unknown function 1 22538 23212
YP_009291338.1 NC_031112_p8 hypothetical protein singleton unknown function unknown function 1 5485 5646
YP_009291357.1 NC_031112_p27 hypothetical protein phrog_901 unknown function unknown function 1 20973 21419
YP_009291343.1 NC_031112_p13 portal protein phrog_776 portal protein head and packaging 1 7070 8704
YP_009291372.1 NC_031112_p42 hypothetical protein phrog_11800 membrane protein moron, auxiliary metabolic gene and host takeover 1 38326 38604
YP_009291344.1 NC_031112_p14 hypothetical protein phrog_14528 unknown function unknown function 1 8708 9070
YP_009291388.1 NC_031112_p58 hypothetical protein phrog_26886 unknown function unknown function 1 47579 47944
YP_009291411.1 NC_031112_p81 hypothetical protein phrog_17380 unknown function unknown function 1 56491 56760
YP_009291366.1 NC_031112_p36 hypothetical protein phrog_24626 unknown function unknown function 1 32592 32864
YP_009291356.1 NC_031112_p26 hypothetical protein phrog_810 unknown function unknown function 1 20422 20976
YP_009291382.1 NC_031112_p52 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 43946 44797
YP_009291402.1 NC_031112_p72 hypothetical protein phrog_30480 unknown function unknown function 1 53514 53801
YP_009291392.1 NC_031112_p62 hypothetical protein singleton unknown function unknown function 1 49130 49276
YP_009291364.1 NC_031112_p34 hypothetical protein phrog_32570 unknown function unknown function 1 30797 31507
YP_009291354.1 NC_031112_p24 major tail protein phrog_792 major tail protein tail 1 18791 19477
YP_009291365.1 NC_031112_p35 hypothetical protein phrog_7719 minor tail protein tail 1 31507 32595
YP_009291385.1 NC_031112_p55 hypothetical protein phrog_19496 unknown function unknown function 1 46130 46309
YP_009291417.1 NC_031112_p87 hypothetical protein singleton unknown function unknown function 1 58826 59044
YP_009291389.1 NC_031112_p59 hypothetical protein singleton unknown function unknown function 1 47941 48156
YP_009291407.1 NC_031112_p77 hypothetical protein singleton unknown function unknown function 1 54830 55372
YP_009291335.1 NC_031112_p5 DNA methylase phrog_116 DNA methyltransferase other 1 2785 4341
YP_009291358.1 NC_031112_p28 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 21403 21834
YP_009291400.1 NC_031112_p70 hypothetical protein singleton unknown function unknown function 1 53063 53335
YP_009291374.1 NC_031112_p44 hypothetical protein phrog_102 endolysin lysis 1 39060 39779
YP_009291375.1 NC_031112_p45 hypothetical protein phrog_17370 unknown function unknown function 1 39800 40333
YP_009291404.1 NC_031112_p74 polynucleotide kinase phrog_415 polynucleotide kinase other 1 53979 54530
YP_009291415.1 NC_031112_p85 hypothetical protein singleton unknown function unknown function 1 57963 58520
YP_009291414.1 NC_031112_p84 hypothetical protein singleton unknown function unknown function 1 57508 57966
YP_009291342.1 NC_031112_p12 hypothetical protein phrog_781 unknown function unknown function 1 6670 7056
YP_009291346.1 NC_031112_p16 hypothetical protein phrog_17748 unknown function unknown function 1 11388 11591
YP_009291370.1 NC_031112_p40 lysin A phrog_2998 endolysin lysis 1 36140 37753
YP_009291371.1 NC_031112_p41 membrane protein phrog_443 holin lysis 1 37767 38264
YP_009291403.1 NC_031112_p73 hypothetical protein singleton unknown function unknown function 1 53788 53982
YP_009291341.1 NC_031112_p11 hypothetical protein phrog_5392 unknown function unknown function 1 6312 6632
YP_009291379.1 NC_031112_p49 ssDNA binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 41997 43058
YP_009291337.1 NC_031112_p7 hypothetical protein phrog_8105 unknown function unknown function 1 5126 5485
YP_009291406.1 NC_031112_p76 hypothetical protein phrog_4852 unknown function unknown function 1 54651 54857
YP_009291410.1 NC_031112_p80 hypothetical protein phrog_23499 unknown function unknown function 1 56303 56494
YP_009291408.1 NC_031112_p78 hypothetical protein phrog_9642 unknown function unknown function 1 55372 55611
YP_009291383.1 NC_031112_p53 hypothetical protein singleton unknown function unknown function 1 44794 45045
YP_009291398.1 NC_031112_p68 hypothetical protein singleton unknown function unknown function 1 51440 52498
YP_009291355.1 NC_031112_p25 hypothetical protein phrog_783 head-tail adaptor connector 1 19634 20425
YP_009291332.1 NC_031112_p2 terminase phrog_38 terminase large subunit head and packaging 1 534 2189
YP_009291387.1 NC_031112_p57 hypothetical protein phrog_21374 unknown function unknown function 1 46695 47585
YP_009291399.1 NC_031112_p69 hypothetical protein phrog_17794 unknown function unknown function 1 52584 53066
YP_009291333.1 NC_031112_p3 hypothetical protein singleton unknown function unknown function 1 2246 2515
YP_009291405.1 NC_031112_p75 hypothetical protein singleton unknown function unknown function 1 54527 54670
YP_009291391.1 NC_031112_p61 DNA methyltransferase phrog_111 DNA methyltransferase other 1 48586 49137
YP_009291367.1 NC_031112_p37 hypothetical protein phrog_1126 unknown function unknown function 1 32878 33219
YP_009291381.1 NC_031112_p51 HTH DNA-binding protein singleton unknown function unknown function 1 43513 43935
YP_009291412.1 NC_031112_p82 hypothetical protein singleton unknown function unknown function 1 56757 57122
YP_009291413.1 NC_031112_p83 hypothetical protein phrog_17681 unknown function unknown function 1 57119 57511
YP_009291362.1 NC_031112_p32 minor tail protein phrog_106 minor tail protein tail 1 28148 29134
YP_009291345.1 NC_031112_p15 hypothetical protein phrog_18477 head morphogenesis head and packaging 1 9070 11391
YP_009291359.1 NC_031112_p29 hypothetical protein phrog_14331 unknown function unknown function 1 21947 22531
YP_009291378.1 NC_031112_p48 hypothetical protein phrog_16141 unknown function unknown function 1 41735 42004
YP_009291347.1 NC_031112_p17 hypothetical protein phrog_21901 unknown function unknown function 1 11584 11808
YP_009291361.1 NC_031112_p31 tape measure protein phrog_6090 tail length tape measure protein tail 1 23257 28146
YP_009291353.1 NC_031112_p23 hypothetical protein phrog_14463 unknown function unknown function 1 18197 18691
YP_009291369.1 NC_031112_p39 hypothetical protein phrog_7114 minor tail protein tail 1 35444 36040
YP_009291352.1 NC_031112_p22 hypothetical protein phrog_779 unknown function unknown function 1 17352 18182
YP_009291395.1 NC_031112_p65 hypothetical protein phrog_16850 unknown function unknown function 1 50254 50622
YP_009291386.1 NC_031112_p56 hypothetical protein phrog_16769 unknown function unknown function 1 46306 46698
YP_009291350.1 NC_031112_p20 hypothetical protein phrog_14225 unknown function unknown function 1 15079 15225
YP_009291340.1 NC_031112_p10 hypothetical protein phrog_33706 unknown function unknown function 1 5859 6257
YP_009291377.1 NC_031112_p47 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 40584 41738
YP_009291349.1 NC_031112_p19 hypothetical protein singleton unknown function unknown function 1 14897 15079
YP_009291384.1 NC_031112_p54 hypothetical protein singleton unknown function unknown function 1 45108 46133