Genomic map of Gordonia phage CarolAnn (NC_031118)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031118
Definition
Gordonia phage CarolAnn, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
54167
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
66.9
Number of singletons
9
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009291980.1 NC_031118_p25 hypothetical protein phrog_3798 unknown function unknown function 1 20904 21254
YP_009291992.1 NC_031118_p37 hypothetical protein phrog_6153 unknown function unknown function -1 31222 31464
YP_009291997.1 NC_031118_p42 hypothetical protein phrog_87 metallo-protease other -1 34975 35400
YP_009292034.1 NC_031118_p79 hypothetical protein singleton unknown function unknown function -1 52817 53410
YP_009292035.1 NC_031118_p80 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 53715 54083
YP_009292014.1 NC_031118_p59 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 42430 43359
YP_009292019.1 NC_031118_p64 hypothetical protein phrog_33336 unknown function unknown function 1 45442 45852
YP_009291998.1 NC_031118_p43 hypothetical protein phrog_38328 unknown function unknown function -1 35464 36000
YP_009291971.1 NC_031118_p16 tail assembly chaperone phrog_5010 tail assembly chaperone tail 1 9318 9728
YP_009291984.1 NC_031118_p29 minor tail protein phrog_737 minor tail protein tail 1 23476 24993
YP_009291993.1 NC_031118_p38 hypothetical protein singleton unknown function unknown function -1 31878 32348
YP_009292008.1 NC_031118_p53 hypothetical protein phrog_19919 unknown function unknown function 1 40474 40893
YP_009291969.1 NC_031118_p14 major tail protein phrog_117 major tail protein tail 1 8578 9216
YP_009292025.1 NC_031118_p70 hypothetical protein phrog_10260 unknown function unknown function 1 48215 48370
YP_009292031.1 NC_031118_p76 resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 51274 51864
YP_009291996.1 NC_031118_p41 hypothetical protein phrog_5316 unknown function unknown function -1 34769 34978
YP_009292000.1 NC_031118_p45 immunity repressor phrog_8 transcriptional regulator transcription regulation -1 37087 37797
YP_009292001.1 NC_031118_p46 HTH DNA binding domain protein phrog_3 transcriptional repressor transcription regulation 1 38066 38320
YP_009291957.1 NC_031118_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 333 1958
YP_009292009.1 NC_031118_p54 hypothetical protein phrog_5984 unknown function unknown function 1 40890 41225
YP_009291956.1 NC_031118_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 56 391
YP_009291963.1 NC_031118_p8 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 6466 6858
YP_009292023.1 NC_031118_p68 methylase phrog_116 DNA methyltransferase other 1 46387 47964
YP_009292024.1 NC_031118_p69 hypothetical protein singleton unknown function unknown function 1 47961 48218
YP_009291982.1 NC_031118_p27 hypothetical protein phrog_9406 unknown function unknown function 1 22042 22416
YP_009292007.1 NC_031118_p52 hypothetical protein phrog_11014 unknown function unknown function 1 40109 40477
YP_009291977.1 NC_031118_p22 holin phrog_443 holin lysis 1 19901 20353
YP_009291962.1 NC_031118_p7 hypothetical protein phrog_2322 head-tail connector protein connector 1 5969 6469
YP_009291994.1 NC_031118_p39 hypothetical protein phrog_12638 unknown function unknown function -1 32371 33240
YP_009291961.1 NC_031118_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5043 5972
YP_009291964.1 NC_031118_p9 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 6858 7220
YP_009292021.1 NC_031118_p66 hypothetical protein singleton unknown function unknown function 1 46032 46280
YP_009292027.1 NC_031118_p72 hypothetical protein phrog_2857 tail fiber protein tail 1 49445 49741
YP_009292029.1 NC_031118_p74 hypothetical protein phrog_27386 unknown function unknown function 1 50025 50186
YP_009292002.1 NC_031118_p47 hypothetical protein phrog_15107 unknown function unknown function 1 38317 38493
YP_009291981.1 NC_031118_p26 lysin B phrog_102 endolysin lysis 1 21251 22045
YP_009292006.1 NC_031118_p51 hypothetical protein phrog_9909 unknown function unknown function 1 39810 40112
YP_009292015.1 NC_031118_p60 ssDNA binding protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 43356 44465
YP_009292017.1 NC_031118_p62 hypothetical protein phrog_12075 membrane protein moron, auxiliary metabolic gene and host takeover 1 44743 44952
YP_009291978.1 NC_031118_p23 membrane protein phrog_4511 unknown function unknown function 1 20353 20676
YP_009291987.1 NC_031118_p32 hypothetical protein phrog_21809 unknown function unknown function 1 27486 28172
YP_009292005.1 NC_031118_p50 hypothetical protein phrog_9588 unknown function unknown function 1 39493 39813
YP_009291960.1 NC_031118_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4629 5039
YP_009292033.1 NC_031118_p78 HTH DNA binding protein phrog_908 unknown function unknown function 1 52043 52804
YP_009291991.1 NC_031118_p36 hypothetical protein singleton unknown function unknown function -1 30232 31212
YP_009292026.1 NC_031118_p71 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 48360 49448
YP_009292028.1 NC_031118_p73 hypothetical protein phrog_16913 unknown function unknown function 1 49738 50028
YP_009291959.1 NC_031118_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3352 4626
YP_009291968.1 NC_031118_p13 head-to-tail connector protein phrog_123 tail terminator connector 1 8053 8472
YP_009292003.1 NC_031118_p48 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 38490 39251
YP_009291988.1 NC_031118_p33 hypothetical protein singleton unknown function unknown function -1 28179 28949
YP_009291972.1 NC_031118_p17 tape measure protein phrog_4197 tail length tape measure protein tail 1 10172 15763
YP_009292022.1 NC_031118_p67 hypothetical protein singleton unknown function unknown function 1 46277 46390
YP_009291989.1 NC_031118_p34 hypothetical protein singleton unknown function unknown function 1 29013 29315
YP_009291970.1 NC_031118_p15 tail assembly chaperone phrog_8183 tail assembly chaperone tail 1 9318 10102
YP_009291985.1 NC_031118_p30 hypothetical protein phrog_8055 unknown function unknown function 1 24993 25325
YP_009291965.1 NC_031118_p10 hypothetical protein phrog_16006 unknown function unknown function 1 7229 7489
YP_009292012.1 NC_031118_p57 hypothetical protein phrog_6877 unknown function unknown function 1 41718 42080
YP_009291973.1 NC_031118_p18 minor tail protein phrog_106 minor tail protein tail 1 15760 16620
YP_009292013.1 NC_031118_p58 hypothetical protein phrog_572 unknown function unknown function 1 42080 42433
YP_009291974.1 NC_031118_p19 minor tail protein phrog_110 minor tail protein tail 1 16617 18263
YP_009292010.1 NC_031118_p55 hypothetical protein phrog_9981 unknown function unknown function 1 41222 41410
YP_009291999.1 NC_031118_p44 hypothetical protein phrog_36224 unknown function unknown function -1 35975 37087
YP_009291995.1 NC_031118_p40 integrase phrog_95 integrase integration and excision 1 33367 34767
YP_009291990.1 NC_031118_p35 hypothetical protein singleton unknown function unknown function -1 29361 30113
YP_009291976.1 NC_031118_p21 lysin A, glycosyl hydrolase domain phrog_3084 endolysin lysis 1 18987 19898
YP_009291967.1 NC_031118_p12 head-to-tail connector protein phrog_5837 head closure Hc1 connector 1 7769 8056
YP_009291979.1 NC_031118_p24 membrane protein phrog_37077 unknown function unknown function 1 20673 20903
YP_009292011.1 NC_031118_p56 hypothetical protein phrog_1622 unknown function unknown function 1 41407 41721
YP_009291975.1 NC_031118_p20 lysin A, L-Ala-D-Glu peptidase domain phrog_1512 endolysin lysis 1 18280 18987
YP_009292016.1 NC_031118_p61 hypothetical protein phrog_8105 unknown function unknown function 1 44462 44746
YP_009291958.1 NC_031118_p3 portal protein phrog_113 portal protein head and packaging 1 1973 3340
YP_009292032.1 NC_031118_p77 hypothetical protein phrog_12987 DNA binding protein DNA, RNA and nucleotide metabolism 1 51861 52046
YP_009292004.1 NC_031118_p49 hypothetical protein phrog_8218 unknown function unknown function 1 39329 39496
YP_009291983.1 NC_031118_p28 minor tail protein phrog_4120 minor tail protein tail 1 22409 23476
YP_009292030.1 NC_031118_p75 hypothetical protein phrog_11256 DNA binding protein DNA, RNA and nucleotide metabolism 1 50183 51277
YP_009292020.1 NC_031118_p65 hypothetical protein phrog_10784 membrane protein moron, auxiliary metabolic gene and host takeover 1 45856 46035
YP_009292018.1 NC_031118_p63 hypothetical protein phrog_8336 unknown function unknown function 1 44936 45442
YP_009291986.1 NC_031118_p31 minor tail protein phrog_11419 tail fiber protein tail 1 25318 27486
YP_009291966.1 NC_031118_p11 head-to-tail connector protein phrog_9658 head-tail connector protein connector 1 7486 7776