Genomic map of Mycobacterium phage Gardann (NC_031124)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031124
Definition
Mycobacterium phage Gardann, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus; unclassified Bronvirus.
DB of origin
REFSEQ
Length
76012
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
126
%GC
58.9
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009292541.1 NC_031124_p27 lysin A phrog_1512 endolysin lysis 1 25355 26305
YP_009292584.1 NC_031124_p70 dsDNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 47613 48878
YP_009292613.1 NC_031124_p99 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61505 61927
YP_009292550.1 NC_031124_p36 Lsr2 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 30215 30676
YP_009292546.1 NC_031124_p32 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 28424 28690
YP_009292592.1 NC_031124_p78 hypothetical protein phrog_6064 unknown function unknown function 1 53003 53236
YP_009292531.1 NC_031124_p17 minor tail protein phrog_106 minor tail protein tail 1 16079 16993
YP_009292640.1 NC_031124_p126 hypothetical protein phrog_7398 unknown function unknown function -1 74662 75171
YP_009292549.1 NC_031124_p35 nucleotidyltransferase phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism -1 29382 30128
YP_009292577.1 NC_031124_p63 ERF family ssDNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44760 45515
YP_009292517.1 NC_031124_p3 hypothetical protein phrog_6976 unknown function unknown function 1 866 1069
YP_009292534.1 NC_031124_p20 minor tail protein phrog_2689 minor tail protein tail 1 19233 21029
YP_009292603.1 NC_031124_p89 ClpP protease phrog_94 head maturation protease head and packaging 1 57496 58179
YP_009292563.1 NC_031124_p49 hypothetical protein phrog_6017 unknown function unknown function 1 37942 38259
YP_009292533.1 NC_031124_p19 minor tail protein phrog_4413 minor tail protein tail 1 18752 19249
YP_009292579.1 NC_031124_p65 hypothetical protein phrog_7527 unknown function unknown function 1 45712 45996
YP_009292560.1 NC_031124_p46 hypothetical protein phrog_5916 unknown function unknown function 1 36247 36612
YP_009292537.1 NC_031124_p23 minor tail protein phrog_240 head protein head and packaging 1 21555 21941
YP_009292530.1 NC_031124_p16 tapemeasure phrog_3547 tail length tape measure protein tail 1 10855 15990
YP_009292522.1 NC_031124_p8 major capsid protein phrog_283 major head protein head and packaging 1 6070 7218
YP_009292544.1 NC_031124_p30 hypothetical protein phrog_5807 unknown function unknown function 1 27754 28008
YP_009292617.1 NC_031124_p103 hypothetical protein phrog_6800 unknown function unknown function 1 62662 62838
YP_009292637.1 NC_031124_p123 hypothetical protein phrog_1909 unknown function unknown function -1 71787 72638
YP_009292611.1 NC_031124_p97 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 60410 61192
YP_009292609.1 NC_031124_p95 hypothetical protein phrog_1042 unknown function unknown function 1 59810 60070
YP_009292597.1 NC_031124_p83 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 54753 55319
YP_009292523.1 NC_031124_p9 head-to-tail connector phrog_137 head-tail adaptor Ad1 connector 1 7231 7695
YP_009292573.1 NC_031124_p59 hypothetical protein phrog_5858 unknown function unknown function 1 43118 43294
YP_009292583.1 NC_031124_p69 hypothetical protein phrog_1882 unknown function unknown function 1 46936 47616
YP_009292519.1 NC_031124_p5 portal protein phrog_104 portal protein head and packaging 1 2638 4293
YP_009292561.1 NC_031124_p47 esterase phrog_1649 metallo-phosphoesterase other 1 36605 37639
YP_009292524.1 NC_031124_p10 head-to-tail connector phrog_5309 head-tail adaptor connector 1 7692 8030
YP_009292545.1 NC_031124_p31 hypothetical protein phrog_726 unknown function unknown function 1 28011 28433
YP_009292601.1 NC_031124_p87 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 56038 57336
YP_009292572.1 NC_031124_p58 hypothetical protein phrog_5872 unknown function unknown function 1 42804 43121
YP_009292623.1 NC_031124_p109 hypothetical protein phrog_2869 unknown function unknown function -1 65976 66167
YP_009292610.1 NC_031124_p96 hypothetical protein phrog_4472 nucleotide kinase other 1 60045 60413
YP_009292586.1 NC_031124_p72 hypothetical protein phrog_6624 unknown function unknown function 1 49162 49416
YP_009292516.1 NC_031124_p2 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 477 866
YP_009292556.1 NC_031124_p42 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 34695 34910
YP_009292521.1 NC_031124_p7 scaffolding protein phrog_3760 head scaffolding protein head and packaging 1 5422 6027
YP_009292616.1 NC_031124_p102 hypothetical protein phrog_6027 unknown function unknown function 1 62543 62662
YP_009292566.1 NC_031124_p52 hypothetical protein phrog_200 lipoprotein other 1 38648 39607
YP_009292595.1 NC_031124_p81 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 54050 54454
YP_009292576.1 NC_031124_p62 hypothetical protein phrog_1123 unknown function unknown function 1 44445 44759
YP_009292580.1 NC_031124_p66 hypothetical protein phrog_1389 unknown function unknown function 1 45993 46352
YP_009292629.1 NC_031124_p115 hypothetical protein phrog_1909 unknown function unknown function -1 68090 68941
YP_009292568.1 NC_031124_p54 hypothetical protein phrog_2380 unknown function unknown function 1 40201 40440
YP_009292575.1 NC_031124_p61 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 43532 44464
YP_009292604.1 NC_031124_p90 hypothetical protein phrog_7495 unknown function unknown function 1 58179 58574
YP_009292618.1 NC_031124_p104 hypothetical protein phrog_10206 unknown function unknown function 1 62948 63082
YP_009292526.1 NC_031124_p12 head-to-tail connector phrog_123 tail terminator connector 1 8471 8974
YP_009292585.1 NC_031124_p71 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 48875 49129
YP_009292587.1 NC_031124_p73 hypothetical protein phrog_6206 unknown function unknown function 1 49406 49552
YP_009292635.1 NC_031124_p121 hypothetical protein phrog_6968 unknown function unknown function -1 70329 70532
YP_009292605.1 NC_031124_p91 hypothetical protein phrog_7890 unknown function unknown function 1 58574 58684
YP_009292582.1 NC_031124_p68 hypothetical protein phrog_542 unknown function unknown function 1 46760 46939
YP_009292567.1 NC_031124_p53 hypothetical protein phrog_4870 unknown function unknown function 1 39781 40200
YP_009292551.1 NC_031124_p37 hypothetical protein phrog_10128 unknown function unknown function -1 30753 31121
YP_009292536.1 NC_031124_p22 minor tail protein phrog_4137 unknown function unknown function 1 21195 21470
YP_009292518.1 NC_031124_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1069 2637
YP_009292564.1 NC_031124_p50 hypothetical protein phrog_7316 unknown function unknown function 1 38267 38395
YP_009292619.1 NC_031124_p105 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 64511 65200
YP_009292625.1 NC_031124_p111 hypothetical protein phrog_14583 unknown function unknown function -1 67017 67544
YP_009292539.1 NC_031124_p25 hypothetical protein phrog_9833 unknown function unknown function 1 24259 24408
YP_009292554.1 NC_031124_p40 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 33892 34281
YP_009292638.1 NC_031124_p124 AAA ATPase phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover -1 72848 74086
YP_009292589.1 NC_031124_p75 nicotinate ribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other 1 50397 51881
YP_009292632.1 NC_031124_p118 hypothetical protein phrog_7390 unknown function unknown function -1 69645 69839
YP_009292607.1 NC_031124_p93 hypothetical protein phrog_1969 unknown function unknown function 1 58913 59251
YP_009292612.1 NC_031124_p98 hypothetical protein phrog_397 unknown function unknown function 1 61193 61375
YP_009292600.1 NC_031124_p86 hypothetical protein phrog_14246 unknown function unknown function 1 55961 56041
YP_009292631.1 NC_031124_p117 hypothetical protein phrog_6224 unknown function unknown function -1 69446 69679
YP_009292636.1 NC_031124_p122 hypothetical protein phrog_6176 unknown function unknown function 1 70592 71074
YP_009292602.1 NC_031124_p88 hypothetical protein phrog_3641 unknown function unknown function 1 57320 57499
YP_009292558.1 NC_031124_p44 hypothetical protein phrog_8707 unknown function unknown function 1 35250 35360
YP_009292562.1 NC_031124_p48 hypothetical protein phrog_9705 unknown function unknown function 1 37620 37955
YP_009292555.1 NC_031124_p41 CRO protein phrog_1702 transcriptional repressor transcription regulation 1 34468 34698
YP_009292620.1 NC_031124_p106 hypothetical protein phrog_6170 unknown function unknown function 1 65209 65559
YP_009292540.1 NC_031124_p26 hypothetical protein phrog_3856 minor tail protein tail 1 24409 25350
YP_009292581.1 NC_031124_p67 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46399 46797
YP_009292615.1 NC_031124_p101 hypothetical protein phrog_3699 unknown function unknown function 1 62332 62550
YP_009292633.1 NC_031124_p119 hypothetical protein phrog_6004 unknown function unknown function -1 69926 70189
YP_009292543.1 NC_031124_p29 hypothetical protein phrog_5963 holin lysis 1 27281 27754
YP_009292569.1 NC_031124_p55 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 40556 41986
YP_009292527.1 NC_031124_p13 major tail protein phrog_476 major tail protein tail 1 9002 9901
YP_009292570.1 NC_031124_p56 hypothetical protein phrog_4670 unknown function unknown function 1 42355 42486
YP_009292515.1 NC_031124_p1 hypothetical protein phrog_7082 unknown function unknown function 1 91 468
YP_009292593.1 NC_031124_p79 resolvase phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53392 53805
YP_009292529.1 NC_031124_p15 tail assembly chaperone phrog_4464 tail assembly chaperone tail 1 9990 10289
YP_009292634.1 NC_031124_p120 hypothetical protein phrog_8547 unknown function unknown function -1 70193 70327
YP_009292547.1 NC_031124_p33 hypothetical protein phrog_6558 unknown function unknown function -1 28760 29104
YP_009292639.1 NC_031124_p125 hypothetical protein phrog_12614 unknown function unknown function -1 74453 74578
YP_009292520.1 NC_031124_p6 capsid maturation protease phrog_193 head maturation protease head and packaging 1 4311 5369
YP_009292594.1 NC_031124_p80 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 53753 54049
YP_009292590.1 NC_031124_p76 polynucleotide kinase phrog_505 polynucleotide kinase other 1 51968 52894
YP_009292574.1 NC_031124_p60 hypothetical protein phrog_7425 unknown function unknown function 1 43287 43490
YP_009292599.1 NC_031124_p85 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 55755 55973
YP_009292559.1 NC_031124_p45 hypothetical protein phrog_572 unknown function unknown function 1 35357 35773
YP_009292596.1 NC_031124_p82 hypothetical protein phrog_1941 unknown function unknown function 1 54444 54674
YP_009292528.1 NC_031124_p14 tail assembly chaperone phrog_2624 tail assembly chaperone tail 1 9990 10813
YP_009292542.1 NC_031124_p28 lysin B phrog_102 endolysin lysis 1 26305 27276
YP_009292626.1 NC_031124_p112 hypothetical protein phrog_6739 unknown function unknown function -1 67537 67653
YP_009292614.1 NC_031124_p100 hypothetical protein phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 61924 62331
YP_009292557.1 NC_031124_p43 hypothetical protein phrog_762 unknown function unknown function 1 34907 35269
YP_009292552.1 NC_031124_p38 integrase phrog_1 integrase integration and excision 1 31657 32964
YP_009292548.1 NC_031124_p34 hypothetical protein phrog_9776 unknown function unknown function -1 29110 29397
YP_009292553.1 NC_031124_p39 hypothetical protein phrog_950 unknown function unknown function -1 32961 33740
YP_009292624.1 NC_031124_p110 hypothetical protein phrog_4776 unknown function unknown function -1 66269 66985
YP_009292538.1 NC_031124_p24 minor tail protein phrog_9784 minor tail protein tail 1 21942 24227
YP_009292598.1 NC_031124_p84 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 55306 55692
YP_009292535.1 NC_031124_p21 minor tail protein phrog_9672 minor tail protein tail 1 21035 21205
YP_009292621.1 NC_031124_p107 hypothetical protein phrog_10010 unknown function unknown function -1 65603 65758
YP_009292622.1 NC_031124_p108 hypothetical protein phrog_2124 unknown function unknown function -1 65755 65895
YP_009292565.1 NC_031124_p51 hypothetical protein phrog_9674 unknown function unknown function 1 38432 38560
YP_009292630.1 NC_031124_p116 hypothetical protein phrog_3777 unknown function unknown function -1 69038 69412
YP_009292627.1 NC_031124_p113 hypothetical protein phrog_6725 unknown function unknown function -1 67653 67823
YP_009292628.1 NC_031124_p114 hypothetical protein phrog_6230 unknown function unknown function -1 67816 68061
YP_009292608.1 NC_031124_p94 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59299 59712
YP_009292606.1 NC_031124_p92 hypothetical protein phrog_2218 unknown function unknown function 1 58681 58920
YP_009292532.1 NC_031124_p18 minor tail protein phrog_110 minor tail protein tail 1 16994 18727
YP_009292588.1 NC_031124_p74 phosphoribosyl pyrophosphate transferase phrog_619 ribose-phosphate pyrophosphokinase other 1 49537 50400
YP_009292571.1 NC_031124_p57 hypothetical protein phrog_301 secreted protein other 1 42479 42814
YP_009292525.1 NC_031124_p11 head-to-tail connector phrog_5775 head-tail connector protein connector 1 8030 8461
YP_009292591.1 NC_031124_p77 hypothetical protein singleton unknown function unknown function 1 52915 53028
YP_009292578.1 NC_031124_p64 hypothetical protein phrog_5917 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45515 45715