Genomic map of Arthrobacter phage Mudcat (NC_031224)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031224
Definition
Arthrobacter phage Mudcat, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mudcatvirus.
DB of origin
REFSEQ
Length
59443
Host Name
Arthrobacter sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
45.1
Number of singletons
0
Number of paralogs
5

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009300730.1 NC_031224_p41 hypothetical protein phrog_6802 unknown function unknown function 1 31353 31718
YP_009300748.1 NC_031224_p59 hypothetical protein phrog_14033 unknown function unknown function 1 42152 42286
YP_009300711.1 NC_031224_p22 tail protein phrog_33 distal tail protein Dit tail 1 23581 24432
YP_009300775.1 NC_031224_p86 hypothetical protein phrog_14407 unknown function unknown function 1 53495 53734
YP_009300724.1 NC_031224_p35 hypothetical protein phrog_13500 unknown function unknown function 1 28997 29221
YP_009300737.1 NC_031224_p48 hypothetical protein phrog_12455 unknown function unknown function 1 33937 34086
YP_009300784.1 NC_031224_p95 hypothetical protein phrog_4303 unknown function unknown function 1 59141 59398
YP_009300754.1 NC_031224_p65 hypothetical protein phrog_8423 unknown function unknown function 1 44140 44418
YP_009300782.1 NC_031224_p93 exonuclease phrog_3953 exonuclease DNA, RNA and nucleotide metabolism 1 55879 56457
YP_009300726.1 NC_031224_p37 acetyltransferase domain protein phrog_14082 unknown function unknown function 1 29689 30003
YP_009300743.1 NC_031224_p54 hypothetical protein phrog_2152 unknown function unknown function 1 35533 36444
YP_009300755.1 NC_031224_p66 hypothetical protein phrog_419 unknown function unknown function 1 44432 44800
YP_009300699.1 NC_031224_p10 portal protein phrog_12 portal protein head and packaging 1 6144 7454
YP_009300693.1 NC_031224_p4 HNH endonuclease phrog_4321 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1084 1491
YP_009300695.1 NC_031224_p6 hypothetical protein phrog_4247 virion structural protein head and packaging 1 2468 2836
YP_009300742.1 NC_031224_p53 hypothetical protein phrog_13604 unknown function unknown function 1 35237 35533
YP_009300761.1 NC_031224_p72 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46403 46915
YP_009300781.1 NC_031224_p92 holiday junction resolvase phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 55611 55913
YP_009300700.1 NC_031224_p11 hypothetical protein phrog_11413 unknown function unknown function 1 7451 8062
YP_009300723.1 NC_031224_p34 hypothetical protein phrog_30660 unknown function unknown function 1 28719 28997
YP_009300725.1 NC_031224_p36 hypothetical protein phrog_6618 unknown function unknown function 1 29318 29539
YP_009300745.1 NC_031224_p56 hypothetical protein phrog_4695 unknown function unknown function 1 36834 37634
YP_009300772.1 NC_031224_p83 hypothetical protein phrog_18426 unknown function unknown function 1 52481 52792
YP_009300765.1 NC_031224_p76 hypothetical protein phrog_14638 unknown function unknown function 1 48819 49637
YP_009300763.1 NC_031224_p74 hypothetical protein phrog_13691 unknown function unknown function 1 47189 47476
YP_009300715.1 NC_031224_p26 hypothetical protein phrog_13239 unknown function unknown function 1 26269 26685
YP_009300705.1 NC_031224_p16 hypothetical protein phrog_4338 unknown function unknown function 1 11556 12113
YP_009300698.1 NC_031224_p9 hypothetical protein phrog_6291 unknown function unknown function 1 5620 6129
YP_009300713.1 NC_031224_p24 hypothetical protein phrog_8599 unknown function unknown function 1 25507 25974
YP_009300721.1 NC_031224_p32 hypothetical protein phrog_14067 unknown function unknown function 1 28141 28329
YP_009300717.1 NC_031224_p28 hypothetical protein phrog_13694 unknown function unknown function 1 27184 27384
YP_009300694.1 NC_031224_p5 endolysin phrog_13392 endolysin lysis 1 1513 2442
YP_009300728.1 NC_031224_p39 hypothetical protein phrog_13924 unknown function unknown function 1 30467 30583
YP_009300756.1 NC_031224_p67 hypothetical protein phrog_13815 unknown function unknown function 1 44890 45168
YP_009300714.1 NC_031224_p25 hypothetical protein phrog_7656 unknown function unknown function 1 25978 26259
YP_009300736.1 NC_031224_p47 hypothetical protein phrog_13917 unknown function unknown function 1 33736 33927
YP_009300741.1 NC_031224_p52 hypothetical protein phrog_6038 unknown function unknown function 1 35110 35232
YP_009300697.1 NC_031224_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 3857 5611
YP_009300710.1 NC_031224_p21 hypothetical protein phrog_4372 tail length tape measure protein tail 1 19103 23581
YP_009300776.1 NC_031224_p87 hypothetical protein phrog_2421 unknown function unknown function 1 53734 53991
YP_009300777.1 NC_031224_p88 hypothetical protein phrog_21403 unknown function unknown function 1 53975 54199
YP_009300716.1 NC_031224_p27 hypothetical protein phrog_5818 unknown function unknown function 1 26727 27017
YP_009300773.1 NC_031224_p84 hypothetical protein phrog_13290 unknown function unknown function 1 52831 53190
YP_009300746.1 NC_031224_p57 hypothetical protein phrog_4678 unknown function unknown function 1 37624 38184
YP_009300766.1 NC_031224_p77 hypothetical protein phrog_13664 unknown function unknown function 1 49634 49840
YP_009300751.1 NC_031224_p62 hypothetical protein phrog_13867 unknown function unknown function 1 43090 43218
YP_009300722.1 NC_031224_p33 hypothetical protein phrog_13615 unknown function unknown function 1 28396 28716
YP_009300762.1 NC_031224_p73 hypothetical protein phrog_20216 unknown function unknown function 1 46935 47189
YP_009300774.1 NC_031224_p85 hypothetical protein phrog_19145 unknown function unknown function 1 53190 53498
YP_009300712.1 NC_031224_p23 tail protein phrog_538 minor tail protein tail 1 24433 25494
YP_009300701.1 NC_031224_p12 capsid & capsid maturation protease phrog_3270 head maturation protease head and packaging 1 8046 10019
YP_009300768.1 NC_031224_p79 hypothetical protein phrog_13630 unknown function unknown function 1 50350 50571
YP_009300706.1 NC_031224_p17 tail protein phrog_2645 major tail protein tail 1 12132 12935
YP_009300733.1 NC_031224_p44 hypothetical protein phrog_918 unknown function unknown function 1 32350 32706
YP_009300758.1 NC_031224_p69 hypothetical protein phrog_419 unknown function unknown function 1 45488 45802
YP_009300770.1 NC_031224_p81 hypothetical protein phrog_6086 HNH endonuclease DNA, RNA and nucleotide metabolism 1 51277 51681
YP_009300740.1 NC_031224_p51 hypothetical protein phrog_17504 unknown function unknown function 1 34867 35091
YP_009300727.1 NC_031224_p38 hypothetical protein phrog_6363 unknown function unknown function 1 30158 30466
YP_009300739.1 NC_031224_p50 hypothetical protein phrog_4079 unknown function unknown function 1 34191 34880
YP_009300783.1 NC_031224_p94 HTH DNA binding domain protein phrog_4291 RNA-dependent RNA polymerase DNA, RNA and nucleotide metabolism 1 56454 59129
YP_009300729.1 NC_031224_p40 hypothetical protein phrog_2152 unknown function unknown function 1 30580 31338
YP_009300720.1 NC_031224_p31 hypothetical protein phrog_13222 unknown function unknown function 1 27883 28101
YP_009300732.1 NC_031224_p43 hypothetical protein phrog_12443 membrane protein moron, auxiliary metabolic gene and host takeover 1 32070 32273
YP_009300734.1 NC_031224_p45 hypothetical protein phrog_4282 unknown function unknown function 1 32721 33317
YP_009300760.1 NC_031224_p71 hypothetical protein phrog_14438 unknown function unknown function 1 46037 46309
YP_009300749.1 NC_031224_p60 hypothetical protein phrog_18271 unknown function unknown function 1 42301 42567
YP_009300767.1 NC_031224_p78 hypothetical protein phrog_21833 unknown function unknown function 1 49907 50350
YP_009300752.1 NC_031224_p63 hypothetical protein phrog_14552 unknown function unknown function 1 43220 43591
YP_009300744.1 NC_031224_p55 hypothetical protein phrog_13128 unknown function unknown function 1 36475 36837
YP_009300747.1 NC_031224_p58 DNA polymerase/primase phrog_4210 DNA polymerase DNA, RNA and nucleotide metabolism 1 38208 42155
YP_009300759.1 NC_031224_p70 hypothetical protein phrog_14070 unknown function unknown function 1 45812 46012
YP_009300709.1 NC_031224_p20 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 18726 19106
YP_009300738.1 NC_031224_p49 hypothetical protein phrog_8761 unknown function unknown function 1 34083 34181
YP_009300757.1 NC_031224_p68 hypothetical protein phrog_419 unknown function unknown function 1 45177 45488
YP_009300771.1 NC_031224_p82 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 51678 52484
YP_009300779.1 NC_031224_p90 hypothetical protein phrog_11305 unknown function unknown function 1 54930 55172
YP_009300780.1 NC_031224_p91 hypothetical protein phrog_20978 unknown function unknown function 1 55277 55414
YP_009300753.1 NC_031224_p64 hypothetical protein phrog_4787 single strand annealing protein DNA, RNA and nucleotide metabolism 1 43645 44139
YP_009300691.1 NC_031224_p2 hypothetical protein phrog_16203 unknown function unknown function -1 380 577
YP_009300690.1 NC_031224_p1 hypothetical protein phrog_6978 unknown function unknown function 1 79 294
YP_009300703.1 NC_031224_p14 hypothetical protein phrog_78 tail terminator connector 1 10349 10651
YP_009300735.1 NC_031224_p46 hypothetical protein phrog_7539 unknown function unknown function 1 33442 33735
YP_009300692.1 NC_031224_p3 hypothetical protein phrog_4259 unknown function unknown function 1 744 1091
YP_009300764.1 NC_031224_p75 ATP-dependent helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 47480 48790
YP_009300731.1 NC_031224_p42 hypothetical protein phrog_5135 unknown function unknown function 1 31702 32022
YP_009300696.1 NC_031224_p7 hypothetical protein phrog_7021 unknown function unknown function 1 2829 3836
YP_009300769.1 NC_031224_p80 HNH endonuclease phrog_14097 HNH endonuclease DNA, RNA and nucleotide metabolism 1 50606 51280
YP_009300708.1 NC_031224_p19 hypothetical protein phrog_11373 tail protein tail 1 14828 18706
YP_009300750.1 NC_031224_p61 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 42564 42977
YP_009300778.1 NC_031224_p89 hypothetical protein phrog_13716 unknown function unknown function 1 54196 54933
YP_009300707.1 NC_031224_p18 tail protein phrog_11373 tail protein tail 1 12935 14734
YP_009300704.1 NC_031224_p15 tail tube protein phrog_2645 major tail protein tail 1 10664 11530
YP_009300719.1 NC_031224_p30 hypothetical protein phrog_13273 unknown function unknown function 1 27696 27893
YP_009300718.1 NC_031224_p29 hypothetical protein phrog_26581 unknown function unknown function 1 27460 27693
YP_009300702.1 NC_031224_p13 hypothetical protein phrog_4270 unknown function unknown function 1 10039 10374