| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031226 |
Definition |
Gordonia phage BaxterFox, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nymbaxtervirinae; Baxtervirus. |
DB of origin |
REFSEQ |
Length |
53717 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
66.54 |
Number of singletons |
6 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009300857.1 | NC_031226_p74 | hypothetical protein | phrog_10621 | unknown function | unknown function | 1 | 48095 | 48304 |
| YP_009300828.1 | NC_031226_p45 | HTH DNA-binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 35506 | 35778 |
| YP_009300867.1 | NC_031226_p84 | hypothetical protein | phrog_15735 | unknown function | unknown function | 1 | 52809 | 52934 |
| YP_009300833.1 | NC_031226_p50 | hypothetical protein | phrog_7723 | unknown function | unknown function | 1 | 37705 | 37932 |
| YP_009300798.1 | NC_031226_p15 | tail assembly chaperone | phrog_3860 | tail assembly chaperone | tail | 1 | 8633 | 9280 |
| YP_009300825.1 | NC_031226_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32770 | 32961 |
| YP_009300832.1 | NC_031226_p49 | hypothetical protein | phrog_5253 | unknown function | unknown function | 1 | 37397 | 37708 |
| YP_009300842.1 | NC_031226_p59 | hypothetical protein | phrog_2857 | tail fiber protein | tail | 1 | 40713 | 41048 |
| YP_009300794.1 | NC_031226_p10 | head-to-tail connector protein | phrog_556 | minor head protein | head and packaging | 1 | 7057 | 7386 |
| YP_009300820.1 | NC_031226_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29912 | 30130 |
| YP_009300859.1 | NC_031226_p76 | hypothetical protein | phrog_6055 | unknown function | unknown function | 1 | 49367 | 49861 |
| YP_009300815.1 | NC_031226_p32 | hypothetical protein | phrog_3243 | unknown function | unknown function | 1 | 27557 | 28459 |
| YP_009300785.1 | NC_031226_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 14 | 346 |
| YP_009300846.1 | NC_031226_p63 | hypothetical protein | phrog_10709 | unknown function | unknown function | 1 | 43414 | 43599 |
| YP_009300868.1 | NC_031226_p85 | hypothetical protein | phrog_10381 | unknown function | unknown function | 1 | 52934 | 53242 |
| YP_009300852.1 | NC_031226_p69 | hypothetical protein | phrog_16050 | unknown function | unknown function | 1 | 46523 | 46771 |
| YP_009300789.1 | NC_031226_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4481 | 4891 |
| YP_009300806.1 | NC_031226_p23 | membrane protein | phrog_4565 | unknown function | unknown function | 1 | 20708 | 20956 |
| YP_009300824.1 | NC_031226_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32212 | 32661 |
| YP_009300796.1 | NC_031226_p12 | major tail protein | phrog_3884 | major tail protein | tail | 1 | 7826 | 8338 |
| YP_009300835.1 | NC_031226_p52 | hypothetical protein | phrog_9213 | unknown function | unknown function | 1 | 38240 | 38452 |
| YP_009300818.1 | NC_031226_p35 | hypothetical protein | phrog_18428 | unknown function | unknown function | -1 | 29289 | 29633 |
| YP_009300858.1 | NC_031226_p75 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 48420 | 49370 |
| YP_009300813.1 | NC_031226_p30 | hypothetical protein | phrog_7114 | minor tail protein | tail | 1 | 26326 | 26847 |
| YP_009300855.1 | NC_031226_p72 | hypothetical protein | phrog_26108 | unknown function | unknown function | 1 | 47480 | 47683 |
| YP_009300807.1 | NC_031226_p24 | membrane protein | phrog_17624 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20956 | 21135 |
| YP_009300795.1 | NC_031226_p11 | head-to-tail connector protein | phrog_2595 | head-tail connector protein | connector | 1 | 7383 | 7823 |
| YP_009300809.1 | NC_031226_p26 | lysin B | phrog_102 | endolysin | lysis | 1 | 21503 | 22126 |
| YP_009300834.1 | NC_031226_p51 | hypothetical protein | phrog_32619 | unknown function | unknown function | 1 | 37929 | 38243 |
| YP_009300843.1 | NC_031226_p60 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 41045 | 41908 |
| YP_009300864.1 | NC_031226_p81 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 51485 | 52147 |
| YP_009337997.1 | NC_031226_p13 | hypothetical protein | phrog_17334 | unknown function | unknown function | 1 | 8397 | 8570 |
| YP_009300786.1 | NC_031226_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 318 | 1901 |
| YP_009300817.1 | NC_031226_p34 | hypothetical protein | phrog_6153 | unknown function | unknown function | -1 | 28679 | 29026 |
| YP_009300837.1 | NC_031226_p54 | hypothetical protein | phrog_204 | unknown function | unknown function | 1 | 38788 | 39126 |
| YP_009300791.1 | NC_031226_p7 | head-to-tail connector protein | phrog_2322 | head-tail connector protein | connector | 1 | 5821 | 6270 |
| YP_009300804.1 | NC_031226_p21 | lysin A | phrog_3084 | endolysin | lysis | 1 | 19500 | 20411 |
| YP_009300799.1 | NC_031226_p16 | hypothetical protein | phrog_2320 | unknown function | unknown function | -1 | 9509 | 9826 |
| YP_009300812.1 | NC_031226_p29 | minor tail protein | phrog_8780 | minor tail protein | tail | 1 | 23989 | 26247 |
| YP_009300808.1 | NC_031226_p25 | membrane protein | phrog_3798 | unknown function | unknown function | 1 | 21132 | 21506 |
| YP_009300805.1 | NC_031226_p22 | membrane protein | phrog_3428 | holin | lysis | 1 | 20414 | 20704 |
| YP_009300792.1 | NC_031226_p8 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6274 | 6648 |
| YP_009300853.1 | NC_031226_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46768 | 47067 |
| YP_009300829.1 | NC_031226_p46 | hypothetical protein | phrog_16839 | unknown function | unknown function | 1 | 35775 | 35936 |
| YP_009300861.1 | NC_031226_p78 | resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 50109 | 50474 |
| YP_009300850.1 | NC_031226_p67 | DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 44728 | 46254 |
| YP_009300814.1 | NC_031226_p31 | hypothetical protein | phrog_5858 | unknown function | unknown function | 1 | 27220 | 27480 |
| YP_009300823.1 | NC_031226_p40 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 31617 | 32252 |
| YP_009300869.1 | NC_031226_p86 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 53261 | 53617 |
| YP_009300810.1 | NC_031226_p27 | minor tail protein | phrog_2689 | minor tail protein | tail | 1 | 22126 | 23631 |
| YP_009300822.1 | NC_031226_p39 | hypothetical protein | phrog_5316 | unknown function | unknown function | -1 | 31393 | 31620 |
| YP_009300854.1 | NC_031226_p71 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 47064 | 47483 |
| YP_009300830.1 | NC_031226_p47 | hypothetical protein | phrog_17511 | unknown function | unknown function | 1 | 35933 | 36481 |
| YP_009300800.1 | NC_031226_p17 | tape measure protein | phrog_7025 | tail length tape measure protein | tail | 1 | 9860 | 16279 |
| YP_009300839.1 | NC_031226_p56 | hypothetical protein | phrog_20777 | unknown function | unknown function | 1 | 40002 | 40214 |
| YP_009300819.1 | NC_031226_p36 | hypothetical protein | phrog_17063 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 29639 | 29875 |
| YP_009300802.1 | NC_031226_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17103 | 18701 |
| YP_009300851.1 | NC_031226_p68 | hypothetical protein | phrog_19263 | unknown function | unknown function | 1 | 46254 | 46526 |
| YP_009300827.1 | NC_031226_p44 | immunity repressor | phrog_6288 | unknown function | unknown function | -1 | 33929 | 35356 |
| YP_009300803.1 | NC_031226_p20 | lysin A | phrog_1512 | endolysin | lysis | 1 | 18796 | 19500 |
| YP_009300790.1 | NC_031226_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 4895 | 5824 |
| YP_009300816.1 | NC_031226_p33 | hypothetical protein | phrog_12868 | unknown function | unknown function | 1 | 28443 | 28646 |
| YP_009300863.1 | NC_031226_p80 | hypothetical protein | phrog_25240 | unknown function | unknown function | 1 | 50974 | 51255 |
| YP_009300845.1 | NC_031226_p62 | hypothetical protein | phrog_19094 | unknown function | unknown function | 1 | 43046 | 43417 |
| YP_009300811.1 | NC_031226_p28 | hypothetical protein | phrog_13955 | unknown function | unknown function | 1 | 23628 | 24011 |
| YP_009300826.1 | NC_031226_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32946 | 33932 |
| YP_009300821.1 | NC_031226_p38 | integrase | phrog_1 | integrase | integration and excision | -1 | 30117 | 31379 |
| YP_009300787.1 | NC_031226_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 1912 | 3216 |
| YP_009300793.1 | NC_031226_p9 | head-to-tail connector protein | phrog_3881 | head-tail connector protein | connector | 1 | 6731 | 7045 |
| YP_009300841.1 | NC_031226_p58 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 40474 | 40716 |
| YP_009300866.1 | NC_031226_p83 | hypothetical protein | phrog_31508 | unknown function | unknown function | 1 | 52582 | 52809 |
| YP_009300840.1 | NC_031226_p57 | hypothetical protein | phrog_6877 | unknown function | unknown function | 1 | 40211 | 40477 |
| YP_009300848.1 | NC_031226_p65 | hypothetical protein | phrog_7793 | unknown function | unknown function | 1 | 44136 | 44279 |
| YP_009300865.1 | NC_031226_p82 | hypothetical protein | phrog_9543 | unknown function | unknown function | 1 | 52263 | 52595 |
| YP_009300788.1 | NC_031226_p4 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3213 | 4478 |
| YP_009300849.1 | NC_031226_p66 | HNH endonuclease | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44276 | 44731 |
| YP_009300844.1 | NC_031226_p61 | ssDNA binding protein | phrog_4171 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 41905 | 43053 |
| YP_009300831.1 | NC_031226_p48 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 36495 | 37400 |
| YP_009300856.1 | NC_031226_p73 | hypothetical protein | phrog_17296 | unknown function | unknown function | 1 | 47683 | 48102 |
| YP_009300862.1 | NC_031226_p79 | hypothetical protein | phrog_14446 | unknown function | unknown function | 1 | 50471 | 50974 |
| YP_009300860.1 | NC_031226_p77 | hypothetical protein | phrog_14741 | unknown function | unknown function | 1 | 49858 | 50112 |
| YP_009300838.1 | NC_031226_p55 | hypothetical protein | phrog_210 | unknown function | unknown function | 1 | 39130 | 40005 |
| YP_009300836.1 | NC_031226_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38449 | 38703 |
| YP_009300797.1 | NC_031226_p14 | tail assembly chaperone | phrog_3860 | tail assembly chaperone | tail | 1 | 8633 | 9537 |
| YP_009300847.1 | NC_031226_p64 | hypothetical protein | phrog_8171 | unknown function | unknown function | 1 | 43693 | 44139 |
| YP_009300801.1 | NC_031226_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16279 | 17106 |