Genomic map of Gordonia phage Hotorobo (NC_031229)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031229
Definition
Gordonia phage Hotorobo, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Woesvirus.
DB of origin
REFSEQ
Length
76972
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
108
%GC
58.85
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009301011.1 NC_031229_p60 zinc-finger DNA binding protein phrog_7649 unknown function unknown function -1 52596 53306
YP_009300979.1 NC_031229_p28 minor tail protein phrog_1887 tail protein tail 1 33733 35961
YP_009300996.1 NC_031229_p45 DNA methylase phrog_67 DNA methyltransferase other -1 44417 45139
YP_009300978.1 NC_031229_p27 minor tail protein phrog_5287 minor tail protein tail 1 31202 33733
YP_009300997.1 NC_031229_p46 hypothetical protein phrog_8142 unknown function unknown function -1 45232 45510
YP_009300968.1 NC_031229_p17 head-to-tail connector protein phrog_7074 head-tail connector protein connector 1 16602 16796
YP_009301003.1 NC_031229_p52 hypothetical protein phrog_8554 unknown function unknown function -1 47798 47953
YP_009301020.1 NC_031229_p69 hypothetical protein phrog_6495 unknown function unknown function -1 57018 57281
YP_009300980.1 NC_031229_p29 minor tail protein phrog_4978 tail protein tail 1 35961 37958
YP_009300952.1 NC_031229_p1 hypothetical protein phrog_9619 unknown function unknown function -1 841 1293
YP_009301010.1 NC_031229_p59 hypothetical protein phrog_8951 unknown function unknown function -1 52306 52599
YP_009300973.1 NC_031229_p22 head-to-tail connector protein phrog_8128 neck protein connector 1 18693 19034
YP_009301044.1 NC_031229_p93 hypothetical protein phrog_9936 unknown function unknown function -1 69505 69708
YP_009301016.1 NC_031229_p65 hypothetical protein phrog_19336 unknown function unknown function -1 55543 55746
YP_009300956.1 NC_031229_p5 hypothetical protein phrog_7096 unknown function unknown function -1 4083 4310
YP_009300986.1 NC_031229_p35 membrane protein phrog_2272 unknown function unknown function 1 40613 41059
YP_009300963.1 NC_031229_p12 structural protein phrog_9707 tail protein tail 1 10890 13280
YP_009301037.1 NC_031229_p86 hypothetical protein phrog_10140 unknown function unknown function -1 64205 64441
YP_009301054.1 NC_031229_p103 hypothetical protein phrog_16909 unknown function unknown function -1 73601 73693
YP_009301034.1 NC_031229_p83 HNH endonuclease phrog_9508 HNH endonuclease DNA, RNA and nucleotide metabolism -1 63067 63573
YP_009300959.1 NC_031229_p8 hypothetical protein phrog_5362 DNA primase DNA, RNA and nucleotide metabolism -1 4602 5558
YP_009300970.1 NC_031229_p19 head-to-tail connector protein phrog_195 head-tail adaptor connector 1 17194 17712
YP_009301018.1 NC_031229_p67 hypothetical protein phrog_6622 unknown function unknown function -1 55877 56503
YP_009301001.1 NC_031229_p50 hypothetical protein phrog_4938 unknown function unknown function -1 47117 47281
YP_009301013.1 NC_031229_p62 hypothetical protein phrog_6746 unknown function unknown function -1 54614 54937
YP_009300961.1 NC_031229_p10 terminase phrog_2 terminase large subunit head and packaging 1 7085 9058
YP_009300988.1 NC_031229_p37 membrane protein phrog_2525 unknown function unknown function 1 41591 41923
YP_009301007.1 NC_031229_p56 HTH DNA-binding protein phrog_6401 DNA binding protein DNA, RNA and nucleotide metabolism -1 50065 50259
YP_009301033.1 NC_031229_p82 hypothetical protein phrog_10697 unknown function unknown function -1 62779 63066
YP_009301023.1 NC_031229_p72 hypothetical protein phrog_7963 unknown function unknown function -1 58750 58995
YP_009301046.1 NC_031229_p95 hypothetical protein phrog_6032 unknown function unknown function -1 70143 71054
YP_009301024.1 NC_031229_p73 hypothetical protein phrog_5406 unknown function unknown function -1 59060 59788
YP_009301035.1 NC_031229_p84 hypothetical protein phrog_4480 unknown function unknown function -1 63570 63857
YP_009300976.1 NC_031229_p25 tail assembly chaperone phrog_3096 tail assembly chaperone tail 1 20248 20841
YP_009301026.1 NC_031229_p75 hypothetical protein phrog_7690 unknown function unknown function -1 59941 60363
YP_009301057.1 NC_031229_p106 hypothetical protein phrog_12137 unknown function unknown function -1 74109 74462
YP_009300953.1 NC_031229_p2 hypothetical protein phrog_14575 unknown function unknown function -1 1290 1553
YP_009301032.1 NC_031229_p81 hypothetical protein phrog_27402 unknown function unknown function -1 62495 62776
YP_009301005.1 NC_031229_p54 DNA polymerase III beta subunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 48308 49441
YP_009301059.1 NC_031229_p108 hypothetical protein phrog_10038 unknown function unknown function -1 74789 75193
YP_009301015.1 NC_031229_p64 hypothetical protein phrog_9303 unknown function unknown function -1 55284 55562
YP_009301040.1 NC_031229_p89 cobalamin biosynthesis protein phrog_5298 cobalamin biosynthesis protein moron, auxiliary metabolic gene and host takeover -1 65174 67087
YP_009300975.1 NC_031229_p24 tail assembly chaperone phrog_3096 tail assembly chaperone tail 1 20248 21116
YP_009301056.1 NC_031229_p105 hypothetical protein phrog_9304 unknown function unknown function -1 73844 74095
YP_009301021.1 NC_031229_p70 hypothetical protein phrog_10570 unknown function unknown function -1 57293 58534
YP_009301009.1 NC_031229_p58 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 50805 52337
YP_009300989.1 NC_031229_p38 holin phrog_10322 unknown function unknown function -1 41920 42159
YP_009301019.1 NC_031229_p68 hypothetical protein phrog_6792 unknown function unknown function -1 56516 57031
YP_009301049.1 NC_031229_p98 hypothetical protein phrog_10234 unknown function unknown function -1 71559 71735
YP_009300990.1 NC_031229_p39 endonuclease/helicase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42162 43367
YP_009301036.1 NC_031229_p85 hypothetical protein phrog_12545 unknown function unknown function -1 63861 64205
YP_009300969.1 NC_031229_p18 head-to-tail connector protein phrog_6879 head-tail connector protein connector 1 16869 17186
YP_009300974.1 NC_031229_p23 major tail protein phrog_290 minor tail protein tail 1 19038 20057
YP_009301058.1 NC_031229_p107 hypothetical protein phrog_22058 unknown function unknown function -1 74520 74747
YP_009301050.1 NC_031229_p99 hypothetical protein phrog_32031 unknown function unknown function -1 71738 71842
YP_009300977.1 NC_031229_p26 tape measure protein phrog_5448 tail length tape measure protein tail 1 21222 31205
YP_009300955.1 NC_031229_p4 hypothetical protein phrog_5311 helicase DNA, RNA and nucleotide metabolism -1 1819 4086
YP_009300954.1 NC_031229_p3 hypothetical protein phrog_7062 unknown function unknown function -1 1550 1822
YP_009300957.1 NC_031229_p6 hypothetical protein phrog_8352 unknown function unknown function -1 4291 4434
YP_009301041.1 NC_031229_p90 AAA-ATPase phrog_5424 ATPase other -1 67078 68634
YP_009301025.1 NC_031229_p74 hypothetical protein phrog_10275 unknown function unknown function -1 59798 59941
YP_009301029.1 NC_031229_p78 hypothetical protein phrog_1342 unknown function unknown function -1 61452 62015
YP_009300999.1 NC_031229_p48 lysin B phrog_102 endolysin lysis -1 45739 46596
YP_009300984.1 NC_031229_p33 lysin A phrog_880 endolysin lysis 1 39144 39776
YP_009301008.1 NC_031229_p57 hypothetical protein phrog_10671 unknown function unknown function -1 50524 50808
YP_009300964.1 NC_031229_p13 hypothetical protein phrog_6679 unknown function unknown function 1 13309 13614
YP_009301028.1 NC_031229_p77 hypothetical protein phrog_6646 unknown function unknown function -1 60901 61329
YP_009300965.1 NC_031229_p14 capsid maturation protease phrog_976 head maturation protease head and packaging 1 13629 14864
YP_009301055.1 NC_031229_p104 hypothetical protein phrog_14408 unknown function unknown function -1 73695 73847
YP_009300972.1 NC_031229_p21 head-to-tail connector protein phrog_5299 unknown function unknown function 1 18194 18679
YP_009301002.1 NC_031229_p51 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 47281 47787
YP_009300991.1 NC_031229_p40 hypothetical protein phrog_11832 unknown function unknown function -1 43367 43468
YP_009301004.1 NC_031229_p53 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 47946 48308
YP_009300981.1 NC_031229_p30 membrane protein phrog_8373 unknown function unknown function 1 37968 38228
YP_009300982.1 NC_031229_p31 membrane protein phrog_565 holin lysis 1 38225 38746
YP_009300985.1 NC_031229_p34 lysin A phrog_6985 endolysin lysis 1 39773 40609
YP_009301022.1 NC_031229_p71 hypothetical protein phrog_11430 unknown function unknown function -1 58583 58753
YP_009301047.1 NC_031229_p96 hypothetical protein phrog_14841 unknown function unknown function -1 71047 71391
YP_009301006.1 NC_031229_p55 exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 49442 50068
YP_009300966.1 NC_031229_p15 scaffolding protein phrog_5455 head decoration head and packaging 1 14901 15371
YP_009300994.1 NC_031229_p43 hypothetical protein phrog_14929 unknown function unknown function -1 44168 44263
YP_009301045.1 NC_031229_p94 hypothetical protein phrog_7001 unknown function unknown function -1 69717 70139
YP_009301014.1 NC_031229_p63 hypothetical protein phrog_7044 unknown function unknown function -1 54934 55287
YP_009300971.1 NC_031229_p20 head-to-tail connector protein phrog_26 tail completion or Neck1 protein connector 1 17700 18197
YP_009301017.1 NC_031229_p66 hypothetical protein phrog_8296 unknown function unknown function -1 55746 55880
YP_009301052.1 NC_031229_p101 hypothetical protein phrog_10550 unknown function unknown function -1 73022 73312
YP_009300960.1 NC_031229_p9 hypothetical protein phrog_6902 terminase small subunit head and packaging 1 5614 7092
YP_009301043.1 NC_031229_p92 hypothetical protein phrog_13875 unknown function unknown function -1 69362 69508
YP_009300958.1 NC_031229_p7 hypothetical protein phrog_12599 unknown function unknown function -1 4421 4585
YP_009301053.1 NC_031229_p102 hypothetical protein phrog_14330 unknown function unknown function -1 73314 73598
YP_009301030.1 NC_031229_p79 hypothetical protein phrog_9086 unknown function unknown function -1 62022 62243
YP_009301048.1 NC_031229_p97 hypothetical protein singleton unknown function unknown function -1 71435 71557
YP_009300992.1 NC_031229_p41 hypothetical protein phrog_6890 endonuclease DNA, RNA and nucleotide metabolism -1 43543 44013
YP_009301027.1 NC_031229_p76 hypothetical protein phrog_5392 unknown function unknown function -1 60410 60751
YP_009300987.1 NC_031229_p36 membrane protein phrog_2344 unknown function unknown function 1 41047 41598
YP_009301051.1 NC_031229_p100 hypothetical protein phrog_6708 unknown function unknown function -1 71935 72906
YP_009301000.1 NC_031229_p49 MazG phrog_3301 pyrophosphatase other -1 46593 47114
YP_009301042.1 NC_031229_p91 hypothetical protein phrog_7008 unknown function unknown function -1 68715 69371
YP_009300993.1 NC_031229_p42 hypothetical protein phrog_10595 unknown function unknown function -1 44026 44157
YP_009300995.1 NC_031229_p44 hypothetical protein phrog_10268 unknown function unknown function -1 44263 44424
YP_009300998.1 NC_031229_p47 hypothetical protein phrog_1673 unknown function unknown function -1 45512 45739
YP_009301031.1 NC_031229_p80 hypothetical protein phrog_17060 unknown function unknown function -1 62244 62495
YP_009300962.1 NC_031229_p11 portal protein phrog_113 portal protein head and packaging 1 9176 10903
YP_009300983.1 NC_031229_p32 membrane protein phrog_6901 unknown function unknown function 1 38824 39147
YP_009301039.1 NC_031229_p88 hypothetical protein phrog_21492 unknown function unknown function -1 64863 65162
YP_009300967.1 NC_031229_p16 major capsid protein phrog_29 major head protein head and packaging 1 15384 16583
YP_009301038.1 NC_031229_p87 hypothetical protein phrog_19874 unknown function unknown function -1 64441 64860
YP_009301012.1 NC_031229_p61 hypothetical protein phrog_5686 unknown function unknown function -1 53382 54509