Genomic map of Gordonia phage Obliviate (NC_031237)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031237
Definition
Gordonia phage Obliviate, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
49286
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
67.53
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009301816.1 NC_031237_p73 hypothetical protein phrog_11256 DNA binding protein DNA, RNA and nucleotide metabolism 1 44695 45894
YP_009301806.1 NC_031237_p63 hypothetical protein phrog_11360 unknown function unknown function 1 40666 40884
YP_009301822.1 NC_031237_p79 hypothetical protein phrog_1138 unknown function unknown function 1 48067 48606
YP_009301765.1 NC_031237_p22 hypothetical protein phrog_4511 unknown function unknown function 1 20176 20499
YP_009301803.1 NC_031237_p60 hypothetical protein phrog_10784 membrane protein moron, auxiliary metabolic gene and host takeover 1 39523 39705
YP_009301783.1 NC_031237_p40 hypothetical protein phrog_8218 unknown function unknown function 1 31641 31805
YP_009301788.1 NC_031237_p45 hypothetical protein singleton unknown function unknown function 1 32818 33150
YP_009301766.1 NC_031237_p23 membrane protein phrog_37077 unknown function unknown function 1 20496 20726
YP_009301793.1 NC_031237_p50 hypothetical protein phrog_1622 unknown function unknown function 1 34448 34762
YP_009301755.1 NC_031237_p12 head-to-tail connector protein phrog_123 tail terminator connector 1 7923 8342
YP_009301756.1 NC_031237_p13 major tail protein phrog_117 major tail protein tail 1 8445 9086
YP_009301753.1 NC_031237_p10 head-to-tail connector protein phrog_9658 head-tail connector protein connector 1 7359 7646
YP_009301808.1 NC_031237_p65 hypothetical protein phrog_22267 transcriptional regulator WhiB-like transcription regulation 1 41567 41860
YP_009301768.1 NC_031237_p25 lysin B phrog_102 endolysin lysis 1 21074 21871
YP_009301763.1 NC_031237_p20 lysin A phrog_3084 endolysin lysis 1 18810 19721
YP_009301781.1 NC_031237_p38 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 30835 31257
YP_009301770.1 NC_031237_p27 minor tail protein phrog_4120 minor tail protein tail 1 22235 23302
YP_009301764.1 NC_031237_p21 membrane protein phrog_443 holin lysis 1 19724 20176
YP_009301809.1 NC_031237_p66 hypothetical protein singleton unknown function unknown function 1 41847 42359
YP_009301815.1 NC_031237_p72 hypothetical protein phrog_27386 unknown function unknown function 1 44537 44698
YP_009301820.1 NC_031237_p77 hypothetical protein phrog_908 unknown function unknown function 1 46932 47708
YP_009301782.1 NC_031237_p39 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 31330 31524
YP_009301769.1 NC_031237_p26 hypothetical protein phrog_9406 unknown function unknown function 1 21868 22242
YP_009301795.1 NC_031237_p52 hypothetical protein phrog_572 unknown function unknown function 1 35205 35558
YP_009301745.1 NC_031237_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 360 1928
YP_009301761.1 NC_031237_p18 minor tail protein phrog_110 minor tail protein tail 1 16440 18086
YP_009301819.1 NC_031237_p76 hypothetical protein phrog_12987 DNA binding protein DNA, RNA and nucleotide metabolism 1 46744 46935
YP_009301802.1 NC_031237_p59 hypothetical protein phrog_8336 unknown function unknown function 1 39019 39519
YP_009301794.1 NC_031237_p51 hypothetical protein phrog_6877 unknown function unknown function 1 34759 35205
YP_009301777.1 NC_031237_p34 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 28915 29199
YP_009301786.1 NC_031237_p43 hypothetical protein phrog_9909 unknown function unknown function 1 32292 32594
YP_009301790.1 NC_031237_p47 hypothetical protein phrog_19919 unknown function unknown function 1 33512 33934
YP_009301784.1 NC_031237_p41 hypothetical protein phrog_6554 unknown function unknown function 1 31802 31984
YP_009301747.1 NC_031237_p4 capsid maturation protease phrog_3894 head maturation protease head and packaging 1 3316 4752
YP_009301760.1 NC_031237_p17 minor tail protein phrog_106 minor tail protein tail 1 15583 16443
YP_009301813.1 NC_031237_p70 hypothetical protein phrog_2857 tail fiber protein tail 1 43957 44253
YP_009301810.1 NC_031237_p67 hypothetical protein phrog_464 unknown function unknown function 1 42359 42727
YP_009301796.1 NC_031237_p53 hypothetical protein phrog_2857 tail fiber protein tail 1 35555 35863
YP_009301791.1 NC_031237_p48 hypothetical protein phrog_5984 unknown function unknown function 1 33931 34266
YP_009301774.1 NC_031237_p31 minor tail protein phrog_15641 tail fiber protein tail 1 25963 27858
YP_009301798.1 NC_031237_p55 ssDNA binding protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 36786 37877
YP_009301754.1 NC_031237_p11 head-to-tail connector protein phrog_5837 head closure Hc1 connector 1 7639 7926
YP_009301778.1 NC_031237_p35 hypothetical protein phrog_22923 unknown function unknown function 1 29246 29677
YP_009301752.1 NC_031237_p9 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 6983 7345
YP_009301757.1 NC_031237_p14 tail assembly chaperone phrog_8183 tail assembly chaperone tail 1 9189 9973
YP_009301748.1 NC_031237_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4754 5206
YP_009301811.1 NC_031237_p68 hypothetical protein phrog_10260 unknown function unknown function 1 42724 42882
YP_009301749.1 NC_031237_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5233 6162
YP_009301818.1 NC_031237_p75 hypothetical protein phrog_17433 unknown function unknown function 1 46478 46747
YP_009301817.1 NC_031237_p74 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 45891 46481
YP_009301762.1 NC_031237_p19 lysin A phrog_1512 endolysin lysis 1 18103 18810
YP_009301780.1 NC_031237_p37 hypothetical protein singleton unknown function unknown function -1 30641 30838
YP_009301775.1 NC_031237_p32 hypothetical protein phrog_6153 unknown function unknown function -1 27895 28122
YP_009301787.1 NC_031237_p44 hypothetical protein phrog_33674 unknown function unknown function 1 32591 32824
YP_009301805.1 NC_031237_p62 hypothetical protein phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 39884 40669
YP_009301792.1 NC_031237_p49 hypothetical protein phrog_9981 unknown function unknown function 1 34263 34451
YP_009301746.1 NC_031237_p3 portal protein phrog_113 portal protein head and packaging 1 1940 3316
YP_009301814.1 NC_031237_p71 hypothetical protein phrog_16913 unknown function unknown function 1 44250 44540
YP_009301799.1 NC_031237_p56 hypothetical protein phrog_8105 unknown function unknown function 1 37874 38179
YP_009301758.1 NC_031237_p15 tail assembly chaperone phrog_5010 tail assembly chaperone tail 1 9189 9599
YP_009301800.1 NC_031237_p57 hypothetical protein phrog_26600 unknown function unknown function 1 38176 38832
YP_009301807.1 NC_031237_p64 hypothetical protein phrog_32119 unknown function unknown function 1 40881 41570
YP_009301797.1 NC_031237_p54 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 35860 36789
YP_009301759.1 NC_031237_p16 tape measure protein phrog_4197 tail length tape measure protein tail 1 10043 15586
YP_009301772.1 NC_031237_p29 hypothetical protein phrog_8055 unknown function unknown function 1 24801 25118
YP_009301812.1 NC_031237_p69 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 42872 43960
YP_009301751.1 NC_031237_p8 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 6591 6983
YP_009301750.1 NC_031237_p7 head-to-tail connector protein phrog_2322 head-tail connector protein connector 1 6166 6594
YP_009301779.1 NC_031237_p36 integrase phrog_1 integrase integration and excision -1 29674 30564
YP_009301773.1 NC_031237_p30 minor tail protein phrog_10433 minor tail protein tail 1 25111 25959
YP_009301801.1 NC_031237_p58 hypothetical protein phrog_12075 membrane protein moron, auxiliary metabolic gene and host takeover 1 38829 39035
YP_009301789.1 NC_031237_p46 hypothetical protein phrog_11014 unknown function unknown function 1 33147 33515
YP_009301744.1 NC_031237_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 56 397
YP_009301823.1 NC_031237_p80 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48856 49218
YP_009301804.1 NC_031237_p61 hypothetical protein phrog_10682 unknown function unknown function 1 39702 39887
YP_009301821.1 NC_031237_p78 hypothetical protein singleton unknown function unknown function 1 47705 48070
YP_009301767.1 NC_031237_p24 membrane protein phrog_3798 unknown function unknown function 1 20727 21077
YP_009301776.1 NC_031237_p33 hypothetical protein phrog_5392 unknown function unknown function -1 28514 28822
YP_009301785.1 NC_031237_p42 hypothetical protein phrog_9588 unknown function unknown function 1 31981 32295
YP_009301771.1 NC_031237_p28 minor tail protein phrog_737 minor tail protein tail 1 23302 24801