Genomic map of Mycobacterium phage Xeno (NC_031243)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031243
Definition
Mycobacterium phage Xeno, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Charlievirus.
DB of origin
REFSEQ
Length
42395
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
69
%GC
66.8
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009302371.1 NC_031243_p57 hypothetical protein phrog_647 unknown function unknown function 1 35966 36400
YP_009302353.1 NC_031243_p39 hypothetical protein phrog_5015 unknown function unknown function 1 28678 29070
YP_009302335.1 NC_031243_p21 hypothetical protein phrog_416 minor tail protein tail 1 20200 21240
YP_009302350.1 NC_031243_p36 hypothetical protein phrog_3507 unknown function unknown function 1 27916 28221
YP_009302356.1 NC_031243_p42 hypothetical protein phrog_4981 unknown function unknown function 1 29865 30140
YP_009302318.1 NC_031243_p4 portal protein phrog_12 portal protein head and packaging 1 2249 3538
YP_009302376.1 NC_031243_p62 hypothetical protein phrog_3599 unknown function unknown function 1 39097 39681
YP_009302344.1 NC_031243_p30 HicB family antitoxin phrog_8245 HicB-like antitoxin moron, auxiliary metabolic gene and host takeover -1 24948 25343
YP_009302369.1 NC_031243_p55 hypothetical protein phrog_2001 unknown function unknown function 1 35530 35655
YP_009302382.1 NC_031243_p68 hypothetical protein phrog_1385 unknown function unknown function 1 41677 41922
YP_009302323.1 NC_031243_p9 hypothetical protein phrog_1531 head closure connector 1 6438 6782
YP_009302374.1 NC_031243_p60 hypothetical protein phrog_2451 unknown function unknown function 1 38028 38162
YP_009302319.1 NC_031243_p5 capsid maturation protease phrog_80 head maturation protease head and packaging 1 3538 4344
YP_009302342.1 NC_031243_p28 holin phrog_526 holin lysis 1 24105 24509
YP_009302359.1 NC_031243_p45 hypothetical protein phrog_5806 unknown function unknown function 1 30582 30713
YP_009302363.1 NC_031243_p49 hypothetical protein phrog_11327 unknown function unknown function 1 32849 33061
YP_009302347.1 NC_031243_p33 integrase phrog_1 integrase integration and excision -1 26204 27175
YP_009302380.1 NC_031243_p66 hypothetical protein phrog_1694 unknown function unknown function 1 41061 41285
YP_009302338.1 NC_031243_p24 hypothetical protein phrog_1172 unknown function unknown function 1 21783 21953
YP_009302361.1 NC_031243_p47 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 30955 31881
YP_009302346.1 NC_031243_p32 hypothetical protein phrog_1712 unknown function unknown function -1 25829 26170
YP_009302330.1 NC_031243_p16 tape measure protein phrog_2337 tail length tape measure protein tail 1 10123 13263
YP_009302336.1 NC_031243_p22 hypothetical protein phrog_6374 unknown function unknown function 1 21255 21404
YP_009302316.1 NC_031243_p2 terminase phrog_9 terminase large subunit head and packaging 1 501 2036
YP_009302351.1 NC_031243_p37 hypothetical protein phrog_10253 unknown function unknown function 1 28218 28343
YP_009302341.1 NC_031243_p27 lysin A phrog_1519 endolysin lysis 1 22600 24108
YP_009302324.1 NC_031243_p10 hypothetical protein phrog_8006 neck protein connector 1 6794 6988
YP_009302320.1 NC_031243_p6 hypothetical protein phrog_10 major head protein head and packaging 1 4372 5664
YP_009302364.1 NC_031243_p50 hypothetical protein phrog_4387 unknown function unknown function 1 33058 33396
YP_009302337.1 NC_031243_p23 hypothetical protein phrog_240 head protein head and packaging 1 21421 21783
YP_009302355.1 NC_031243_p41 hypothetical protein phrog_4656 unknown function unknown function 1 29635 29868
YP_009302377.1 NC_031243_p63 hypothetical protein phrog_6821 unknown function unknown function 1 39678 39926
YP_009302365.1 NC_031243_p51 DNA translocase phrog_6152 unknown function unknown function 1 33393 34460
YP_009302383.1 NC_031243_p69 HNH endonuclease domain protein phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41900 42208
YP_009302328.1 NC_031243_p14 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 9036 9942
YP_009302348.1 NC_031243_p34 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 27181 27588
YP_009302339.1 NC_031243_p25 RelB-like antitoxin phrog_2268 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover -1 21960 22208
YP_009302362.1 NC_031243_p48 ssDNA binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 31878 32852
YP_009302358.1 NC_031243_p44 hypothetical protein phrog_5559 unknown function unknown function 1 30406 30585
YP_009302325.1 NC_031243_p11 head-to-tail connector phrog_2325 minor tail protein tail 1 6975 7346
YP_009302357.1 NC_031243_p43 hypothetical protein phrog_5803 unknown function unknown function 1 30137 30409
YP_009302349.1 NC_031243_p35 HTH-XRE DNA-binding domain protein phrog_4583 transcriptional repressor transcription regulation 1 27686 27919
YP_009302334.1 NC_031243_p20 minor tail protein phrog_746 minor tail protein tail 1 17553 20198
YP_009302315.1 NC_031243_p1 hypothetical protein phrog_6975 unknown function unknown function 1 64 504
YP_009302368.1 NC_031243_p54 hypothetical protein phrog_3821 unknown function unknown function 1 35193 35477
YP_009302366.1 NC_031243_p52 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34457 34960
YP_009302331.1 NC_031243_p17 minor tail protein phrog_106 minor tail protein tail 1 13265 14986
YP_009302340.1 NC_031243_p26 RelE-like toxin phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover -1 22205 22468
YP_009302333.1 NC_031243_p19 minor tail protein phrog_732 minor tail protein tail 1 16711 17553
YP_009302360.1 NC_031243_p46 hypothetical protein phrog_4702 unknown function unknown function 1 30710 30958
YP_009302354.1 NC_031243_p40 hypothetical protein phrog_658 unknown function unknown function 1 29132 29635
YP_009302326.1 NC_031243_p12 head-to-tail connector phrog_813 head-tail adaptor connector 1 7343 7762
YP_009302352.1 NC_031243_p38 hypothetical protein singleton unknown function unknown function 1 28340 28681
YP_009302343.1 NC_031243_p29 hypothetical protein phrog_404 minor tail protein tail 1 24506 24874
YP_009302321.1 NC_031243_p7 hypothetical protein phrog_7530 unknown function unknown function 1 5730 5963
YP_009302367.1 NC_031243_p53 hypothetical protein phrog_6109 unknown function unknown function 1 34954 35196
YP_009302378.1 NC_031243_p64 hypothetical protein phrog_14001 unknown function unknown function 1 39923 40255
YP_009302375.1 NC_031243_p61 helix-turn-helix DNA binding domain protein phrog_1408 replication initiation protein DNA, RNA and nucleotide metabolism 1 38162 39100
YP_009302379.1 NC_031243_p65 hypothetical protein phrog_908 unknown function unknown function 1 40252 40917
YP_009302381.1 NC_031243_p67 hypothetical protein phrog_1186 unknown function unknown function 1 41282 41680
YP_009302345.1 NC_031243_p31 hypothetical protein phrog_17706 membrane protein moron, auxiliary metabolic gene and host takeover -1 25440 25805
YP_009302322.1 NC_031243_p8 hypothetical protein phrog_442 head-tail adaptor connector 1 5956 6441
YP_009302332.1 NC_031243_p18 minor tail protein phrog_110 minor tail protein tail 1 14986 16695
YP_009302370.1 NC_031243_p56 hypothetical protein phrog_2060 DNA methyltransferase other 1 35652 35969
YP_009302327.1 NC_031243_p13 major tail protein phrog_476 major tail protein tail 1 7877 8935
YP_009302317.1 NC_031243_p3 hypothetical protein phrog_6750 unknown function unknown function 1 2062 2235
YP_009302372.1 NC_031243_p58 hypothetical protein phrog_5921 unknown function unknown function 1 36393 36545
YP_009302329.1 NC_031243_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9036 9566
YP_009302373.1 NC_031243_p59 DNA methylase phrog_67 DNA methyltransferase other 1 36538 38031