| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031247 |
Definition |
Gordonia phage BetterKatz, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Betterkatzvirus; Gordonia virus BetterKatz. |
DB of origin |
REFSEQ |
Length |
50636 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
67.11 |
Number of singletons |
21 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009302786.1 | NC_031247_p29 | lysin A | phrog_6007 | endolysin | lysis | 1 | 25067 | 25888 |
| YP_009302770.1 | NC_031247_p13 | head-to-tail connector protein | phrog_501 | head closure Hc1 | connector | 1 | 8879 | 9199 |
| YP_009302784.1 | NC_031247_p27 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 23574 | 24641 |
| YP_009302797.1 | NC_031247_p40 | immunity repressor | phrog_12831 | transcriptional repressor | transcription regulation | -1 | 31823 | 32326 |
| YP_009302817.1 | NC_031247_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40307 | 40651 |
| YP_009302819.1 | NC_031247_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40995 | 41402 |
| YP_009302814.1 | NC_031247_p57 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 39050 | 39382 |
| YP_009302785.1 | NC_031247_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24663 | 25031 |
| YP_009302792.1 | NC_031247_p35 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 28530 | 28751 |
| YP_009302812.1 | NC_031247_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38759 | 38872 |
| YP_009302829.1 | NC_031247_p72 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 48566 | 48934 |
| YP_009302778.1 | NC_031247_p21 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16552 | 17613 |
| YP_009302806.1 | NC_031247_p49 | hypothetical protein | phrog_204 | unknown function | unknown function | 1 | 35495 | 35839 |
| YP_009302804.1 | NC_031247_p47 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 34191 | 35018 |
| YP_009302759.1 | NC_031247_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 997 | 1131 |
| YP_009302773.1 | NC_031247_p16 | major tail protein | phrog_117 | major tail protein | tail | 1 | 9953 | 10498 |
| YP_009302790.1 | NC_031247_p33 | hypothetical protein | phrog_11860 | unknown function | unknown function | 1 | 27447 | 27839 |
| YP_009302828.1 | NC_031247_p71 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 47562 | 48569 |
| YP_009302774.1 | NC_031247_p17 | hypothetical protein | phrog_27766 | unknown function | unknown function | 1 | 10498 | 10860 |
| YP_009302816.1 | NC_031247_p59 | hypothetical protein | phrog_10893 | unknown function | unknown function | 1 | 39771 | 40310 |
| YP_009302771.1 | NC_031247_p14 | head-to-tail connector protein | phrog_6485 | tail terminator | connector | 1 | 9202 | 9588 |
| YP_009302776.1 | NC_031247_p19 | tail assembly chaperone | singleton | unknown function | unknown function | 1 | 10860 | 11267 |
| YP_009302808.1 | NC_031247_p51 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 36768 | 37547 |
| YP_009302789.1 | NC_031247_p32 | membrane protein | phrog_8672 | unknown function | unknown function | 1 | 27064 | 27450 |
| YP_009302787.1 | NC_031247_p30 | lysin A | phrog_34417 | unknown function | unknown function | 1 | 25881 | 26702 |
| YP_009302768.1 | NC_031247_p11 | head-to-tail connector protein | phrog_2322 | head-tail connector protein | connector | 1 | 8026 | 8487 |
| YP_009302815.1 | NC_031247_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39415 | 39774 |
| YP_009302761.1 | NC_031247_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1319 | 1750 |
| YP_009302813.1 | NC_031247_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38865 | 39053 |
| YP_009302760.1 | NC_031247_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1143 | 1322 |
| YP_009302779.1 | NC_031247_p22 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17603 | 19309 |
| YP_009302794.1 | NC_031247_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29193 | 29564 |
| YP_009302775.1 | NC_031247_p18 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 10860 | 11764 |
| YP_009302820.1 | NC_031247_p63 | metallophosphatase | phrog_547 | phosphoesterase | other | 1 | 41399 | 42031 |
| YP_009302791.1 | NC_031247_p34 | hypothetical protein | phrog_8245 | HicB-like antitoxin | moron, auxiliary metabolic gene and host takeover | -1 | 27920 | 28336 |
| YP_009302765.1 | NC_031247_p8 | capsid maturation protease | phrog_3894 | head maturation protease | head and packaging | 1 | 5151 | 6629 |
| YP_009302822.1 | NC_031247_p65 | hydrolase | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 42412 | 42768 |
| YP_009302801.1 | NC_031247_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33321 | 33644 |
| YP_009302830.1 | NC_031247_p73 | DNA-binding protein | phrog_908 | unknown function | unknown function | 1 | 48918 | 49793 |
| YP_009302777.1 | NC_031247_p20 | tape measure protein | phrog_9228 | tail length tape measure protein | tail | 1 | 11757 | 16547 |
| YP_009302810.1 | NC_031247_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37880 | 38254 |
| YP_009302762.1 | NC_031247_p5 | terminase small subunit | phrog_34561 | terminase small subunit | head and packaging | 1 | 1729 | 2148 |
| YP_009302827.1 | NC_031247_p70 | DNA primase | phrog_28894 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44432 | 47293 |
| YP_009302823.1 | NC_031247_p66 | DNA methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 42765 | 43475 |
| YP_009302799.1 | NC_031247_p42 | HTH DNA-binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 32945 | 33160 |
| YP_009302831.1 | NC_031247_p74 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49906 | 50268 |
| YP_009302772.1 | NC_031247_p15 | head-to-tail connector protein | phrog_8079 | neck protein | connector | 1 | 9588 | 9866 |
| YP_009302832.1 | NC_031247_p75 | hypothetical protein | phrog_32262 | unknown function | unknown function | 1 | 50288 | 50542 |
| YP_009302781.1 | NC_031247_p24 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19764 | 20864 |
| YP_009302769.1 | NC_031247_p12 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8487 | 8879 |
| YP_009302795.1 | NC_031247_p38 | hypothetical protein | phrog_19157 | unknown function | unknown function | 1 | 29628 | 30077 |
| YP_009302824.1 | NC_031247_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43478 | 43714 |
| YP_009302796.1 | NC_031247_p39 | integrase | phrog_1 | integrase | integration and excision | -1 | 30311 | 31582 |
| YP_009302758.1 | NC_031247_p1 | endonuclease | phrog_16945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 139 | 792 |
| YP_009302788.1 | NC_031247_p31 | holin | phrog_3428 | holin | lysis | 1 | 26699 | 27064 |
| YP_009302767.1 | NC_031247_p10 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 7097 | 8029 |
| YP_009302818.1 | NC_031247_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40651 | 40998 |
| YP_009302802.1 | NC_031247_p45 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 33644 | 33964 |
| YP_009302793.1 | NC_031247_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28846 | 29115 |
| YP_009302821.1 | NC_031247_p64 | hypothetical protein | phrog_2857 | tail fiber protein | tail | 1 | 42074 | 42385 |
| YP_009302805.1 | NC_031247_p48 | hypothetical protein | phrog_16387 | unknown function | unknown function | 1 | 35022 | 35471 |
| YP_009302803.1 | NC_031247_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33961 | 34194 |
| YP_009302826.1 | NC_031247_p69 | hypothetical protein | phrog_3230 | unknown function | unknown function | 1 | 43944 | 44435 |
| YP_009302811.1 | NC_031247_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38247 | 38762 |
| YP_009302807.1 | NC_031247_p50 | hypothetical protein | phrog_210 | unknown function | unknown function | 1 | 35876 | 36739 |
| YP_009302783.1 | NC_031247_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23381 | 23572 |
| YP_009302825.1 | NC_031247_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43711 | 43947 |
| YP_009302766.1 | NC_031247_p9 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 6631 | 7077 |
| YP_009302782.1 | NC_031247_p25 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 20866 | 23376 |
| YP_009302800.1 | NC_031247_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33157 | 33324 |
| YP_009302764.1 | NC_031247_p7 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 3724 | 5151 |
| YP_009302809.1 | NC_031247_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37641 | 37883 |
| YP_009302763.1 | NC_031247_p6 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2231 | 3661 |
| YP_009302780.1 | NC_031247_p23 | minor tail protein | phrog_13217 | minor tail protein | tail | 1 | 19324 | 19764 |
| YP_009302798.1 | NC_031247_p41 | HTH DNA-binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 32601 | 32837 |