Genomic map of Gordonia phage UmaThurman (NC_031249)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031249
Definition
Gordonia phage UmaThurman, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
50127
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
83
%GC
67.02
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009302847.1 NC_031249_p11 head-to-tail connector protein phrog_9658 head-tail connector protein connector 1 7697 7984
YP_009302901.1 NC_031249_p65 hypothetical protein phrog_11360 unknown function unknown function 1 41987 42208
YP_009302844.1 NC_031249_p8 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 6567 6959
YP_009302886.1 NC_031249_p50 hypothetical protein phrog_9981 unknown function unknown function 1 36500 36688
YP_009302904.1 NC_031249_p68 hypothetical protein phrog_22267 transcriptional regulator WhiB-like transcription regulation 1 43634 43903
YP_009302873.1 NC_031249_p37 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 31748 31954
YP_009302853.1 NC_031249_p17 tape measure protein phrog_4197 tail length tape measure protein tail 1 10381 15924
YP_009302852.1 NC_031249_p16 tail assembly chaperone phrog_5010 tail assembly chaperone tail 1 9527 9937
YP_009302914.1 NC_031249_p78 hypothetical protein phrog_7217 unknown function unknown function 1 47249 47482
YP_009302875.1 NC_031249_p39 hypothetical protein phrog_4652 unknown function unknown function 1 32723 33346
YP_009302911.1 NC_031249_p75 hypothetical protein singleton unknown function unknown function 1 45974 46447
YP_009302843.1 NC_031249_p7 head-to-tail connector protein phrog_2322 head-tail connector protein connector 1 6142 6570
YP_009302887.1 NC_031249_p51 hypothetical protein phrog_1622 unknown function unknown function 1 36685 36999
YP_009302877.1 NC_031249_p41 hypothetical protein phrog_15946 unknown function unknown function 1 33701 34123
YP_009302908.1 NC_031249_p72 hypothetical protein phrog_2857 tail fiber protein tail 1 45236 45532
YP_009302840.1 NC_031249_p4 capsid maturation protease phrog_3894 head maturation protease head and packaging 1 3316 4728
YP_009302872.1 NC_031249_p36 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 31237 31566
YP_009302906.1 NC_031249_p70 hypothetical protein phrog_2118 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44054 44461
YP_009302876.1 NC_031249_p40 hypothetical protein singleton unknown function unknown function 1 33362 33685
YP_009302912.1 NC_031249_p76 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 46447 47037
YP_009302857.1 NC_031249_p21 lysin A phrog_3084 endolysin lysis 1 19145 20056
YP_009302862.1 NC_031249_p26 minor tail protein phrog_9406 unknown function unknown function 1 22077 22451
YP_009302869.1 NC_031249_p33 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 29524 29805
YP_009302885.1 NC_031249_p49 hypothetical protein phrog_5984 unknown function unknown function 1 36168 36503
YP_009302863.1 NC_031249_p27 minor tail protein phrog_4120 minor tail protein tail 1 22444 23511
YP_009302837.1 NC_031249_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 56 397
YP_009302893.1 NC_031249_p57 hypothetical protein phrog_8105 unknown function unknown function 1 40006 40257
YP_009302895.1 NC_031249_p59 hypothetical protein phrog_8336 unknown function unknown function 1 40450 40944
YP_009302859.1 NC_031249_p23 membrane protein phrog_11800 membrane protein moron, auxiliary metabolic gene and host takeover 1 20584 20838
YP_009302851.1 NC_031249_p15 tail assembly chaperone phrog_8183 tail assembly chaperone tail 1 9527 10311
YP_009302918.1 NC_031249_p82 hypothetical protein phrog_21675 unknown function unknown function 1 48754 49467
YP_009302889.1 NC_031249_p53 hypothetical protein phrog_572 unknown function unknown function 1 37358 37711
YP_009302868.1 NC_031249_p32 hypothetical protein phrog_5392 unknown function unknown function -1 29123 29419
YP_009302865.1 NC_031249_p29 minor tail protein phrog_8055 unknown function unknown function 1 25025 25360
YP_009302907.1 NC_031249_p71 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 44454 45239
YP_009302870.1 NC_031249_p34 hypothetical protein singleton unknown function unknown function -1 29936 30196
YP_009302910.1 NC_031249_p74 hypothetical protein phrog_27386 unknown function unknown function 1 45816 45977
YP_009302897.1 NC_031249_p61 hypothetical protein phrog_10682 unknown function unknown function 1 41127 41315
YP_009302861.1 NC_031249_p25 lysin B phrog_102 endolysin lysis 1 21277 22080
YP_009302855.1 NC_031249_p19 minor tail protein phrog_110 minor tail protein tail 1 16778 18424
YP_009302884.1 NC_031249_p48 hypothetical protein phrog_19919 unknown function unknown function 1 35749 36171
YP_009302883.1 NC_031249_p47 hypothetical protein phrog_11014 unknown function unknown function 1 35528 35752
YP_009302915.1 NC_031249_p79 hypothetical protein phrog_12987 DNA binding protein DNA, RNA and nucleotide metabolism 1 47479 47664
YP_009302871.1 NC_031249_p35 integrase phrog_1 integrase integration and excision -1 30235 31152
YP_009302891.1 NC_031249_p55 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 38004 38933
YP_009302856.1 NC_031249_p20 lysin A phrog_1512 endolysin lysis 1 18441 19145
YP_009302858.1 NC_031249_p22 membrane protein phrog_443 holin lysis 1 20059 20520
YP_009302867.1 NC_031249_p31 hypothetical protein phrog_6153 unknown function unknown function -1 28508 28735
YP_009302903.1 NC_031249_p67 hypothetical protein phrog_67 DNA methyltransferase other 1 42612 43637
YP_009302902.1 NC_031249_p66 hypothetical protein phrog_12575 unknown function unknown function 1 42205 42615
YP_009302874.1 NC_031249_p38 hypothetical protein singleton unknown function unknown function 1 31954 32607
YP_009302890.1 NC_031249_p54 hypothetical protein phrog_2857 tail fiber protein tail 1 37708 38007
YP_009302905.1 NC_031249_p69 hypothetical protein phrog_10260 unknown function unknown function 1 43900 44064
YP_009302841.1 NC_031249_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4730 5182
YP_009302854.1 NC_031249_p18 minor tail protein phrog_106 minor tail protein tail 1 15921 16781
YP_009302845.1 NC_031249_p9 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 6959 7321
YP_009302879.1 NC_031249_p43 hypothetical protein phrog_6554 unknown function unknown function 1 34287 34469
YP_009302894.1 NC_031249_p58 hypothetical protein phrog_12075 membrane protein moron, auxiliary metabolic gene and host takeover 1 40254 40466
YP_009302860.1 NC_031249_p24 membrane protein phrog_10261 membrane protein moron, auxiliary metabolic gene and host takeover 1 20825 21283
YP_009302850.1 NC_031249_p14 major tail protein phrog_117 major tail protein tail 1 8786 9424
YP_009302882.1 NC_031249_p46 hypothetical protein phrog_28200 unknown function unknown function 1 35085 35531
YP_009302864.1 NC_031249_p28 minor tail protein phrog_737 minor tail protein tail 1 23511 25025
YP_009302892.1 NC_031249_p56 ssDNA binding protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 38930 40009
YP_009302838.1 NC_031249_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 360 1928
YP_009302896.1 NC_031249_p60 hypothetical protein phrog_10784 membrane protein moron, auxiliary metabolic gene and host takeover 1 40948 41130
YP_009302916.1 NC_031249_p80 hypothetical protein phrog_908 unknown function unknown function 1 47661 48437
YP_009302881.1 NC_031249_p45 hypothetical protein phrog_9909 unknown function unknown function 1 34786 35088
YP_009302878.1 NC_031249_p42 hypothetical protein phrog_8218 unknown function unknown function 1 34120 34287
YP_009302866.1 NC_031249_p30 minor tail protein phrog_36751 minor tail protein tail 1 25353 28478
YP_009302917.1 NC_031249_p81 hypothetical protein phrog_29880 unknown function unknown function 1 48434 48757
YP_009302842.1 NC_031249_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5209 6138
YP_009302913.1 NC_031249_p77 hypothetical protein singleton unknown function unknown function 1 47034 47252
YP_009302909.1 NC_031249_p73 hypothetical protein phrog_16913 unknown function unknown function 1 45529 45819
YP_009302880.1 NC_031249_p44 hypothetical protein phrog_9588 unknown function unknown function 1 34466 34789
YP_009302898.1 NC_031249_p62 hypothetical protein phrog_20668 unknown function unknown function 1 41312 41485
YP_009302839.1 NC_031249_p3 portal protein phrog_113 portal protein head and packaging 1 1940 3316
YP_009302888.1 NC_031249_p52 hypothetical protein phrog_6877 unknown function unknown function 1 36996 37358
YP_009302900.1 NC_031249_p64 hypothetical protein phrog_10015 unknown function unknown function 1 41829 41990
YP_009302848.1 NC_031249_p12 head-to-tail connector protein phrog_5837 head closure Hc1 connector 1 7977 8264
YP_009302849.1 NC_031249_p13 head-to-tail connector protein phrog_123 tail terminator connector 1 8261 8680
YP_009302899.1 NC_031249_p63 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 41482 41829
YP_009302919.1 NC_031249_p83 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49697 50059
YP_009302846.1 NC_031249_p10 hypothetical protein phrog_6910 unknown function unknown function 1 7330 7695