Genomic map of Salmonella phage BP63 (NC_031250)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031250
Definition
Salmonella phage BP63, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Rosemountvirus; Salmonella virus BP63.
DB of origin
REFSEQ
Length
52437
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
46.02
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009302935.1 NC_031250_p16 thymidylate kinase phrog_761 thymidylate kinase other 1 5705 6211
YP_009302956.1 NC_031250_p37 hypothetical protein phrog_817 tail fiber protein tail 1 24880 25776
YP_009302977.1 NC_031250_p58 hypothetical protein singleton unknown function unknown function -1 39109 39273
YP_009302924.1 NC_031250_p5 hypothetical protein phrog_10979 membrane protein moron, auxiliary metabolic gene and host takeover -1 1229 1354
YP_009302974.1 NC_031250_p55 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 37219 38103
YP_009302991.1 NC_031250_p72 hypothetical protein phrog_2480 unknown function unknown function -1 48052 48501
YP_009302973.1 NC_031250_p54 DNA polymerase beta subunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 36193 37188
YP_009302945.1 NC_031250_p26 hypothetical protein phrog_939 head protein head and packaging 1 13667 14044
YP_009302944.1 NC_031250_p25 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 13179 13667
YP_009302926.1 NC_031250_p7 hypothetical protein phrog_37772 unknown function unknown function -1 1616 2005
YP_009302933.1 NC_031250_p14 hypothetical protein phrog_1365 unknown function unknown function 1 4557 5033
YP_009302923.1 NC_031250_p4 hypothetical protein phrog_28081 unknown function unknown function -1 1050 1217
YP_009302967.1 NC_031250_p48 lysozyme phrog_7 endolysin lysis 1 32679 33185
YP_009302952.1 NC_031250_p33 hypothetical protein phrog_280 virion structural protein head and packaging 1 22160 22591
YP_009302989.1 NC_031250_p70 hypothetical protein phrog_22331 unknown function unknown function -1 47310 47600
YP_009302930.1 NC_031250_p11 hypothetical protein phrog_9997 unknown function unknown function -1 2731 3297
YP_009302981.1 NC_031250_p62 hypothetical protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 42271 43149
YP_009302961.1 NC_031250_p42 hypothetical protein phrog_6 baseplate wedge subunit tail 1 28098 29270
YP_009302954.1 NC_031250_p35 hypothetical protein singleton unknown function unknown function 1 23107 23220
YP_009302925.1 NC_031250_p6 hypothetical protein phrog_35966 unknown function unknown function -1 1416 1616
YP_009302993.1 NC_031250_p74 hypothetical protein phrog_37966 unknown function unknown function -1 48783 49220
YP_009302957.1 NC_031250_p38 hypothetical protein phrog_349 virion structural protein head and packaging 1 25776 26168
YP_009302951.1 NC_031250_p32 hypothetical protein phrog_205 tail sheath tail 1 21009 22148
YP_009302971.1 NC_031250_p52 hypothetical protein phrog_28954 unknown function unknown function -1 33935 34210
YP_009302946.1 NC_031250_p27 hypothetical protein phrog_6920 unknown function unknown function 1 13968 14495
YP_009302987.1 NC_031250_p68 hypothetical protein phrog_33391 unknown function unknown function -1 46003 46908
YP_009302985.1 NC_031250_p66 hypothetical protein singleton unknown function unknown function -1 45217 45447
YP_009302990.1 NC_031250_p71 hypothetical protein phrog_27896 unknown function unknown function -1 47669 48007
YP_009302978.1 NC_031250_p59 hypothetical protein phrog_28664 unknown function unknown function -1 39760 40227
YP_009302983.1 NC_031250_p64 hypothetical protein phrog_2300 unknown function unknown function -1 43680 44225
YP_009302969.1 NC_031250_p50 hypothetical protein phrog_456 Rz-like spanin lysis 1 33477 33695
YP_009302960.1 NC_031250_p41 hypothetical protein phrog_120 baseplate wedge subunit tail 1 27727 28098
YP_009302936.1 NC_031250_p17 hypothetical protein phrog_37540 unknown function unknown function 1 6208 6927
YP_009302964.1 NC_031250_p45 hypothetical protein phrog_136 tail fiber assembly protein tail 1 31253 31795
YP_009302986.1 NC_031250_p67 hypothetical protein phrog_37080 unknown function unknown function -1 45508 45954
YP_009302939.1 NC_031250_p20 terminase large subunit phrog_2 terminase large subunit head and packaging 1 7689 9137
YP_009302947.1 NC_031250_p28 hypothetical protein phrog_27998 tail fiber protein tail 1 14495 15118
YP_009302980.1 NC_031250_p61 DEAD box helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 40542 42212
YP_009302995.1 NC_031250_p76 primase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 49681 52215
YP_009302972.1 NC_031250_p53 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 34226 36193
YP_009302942.1 NC_031250_p23 major capsid protein phrog_247 major head protein head and packaging 1 11596 12573
YP_009302955.1 NC_031250_p36 hypothetical protein phrog_29251 tail length tape measure protein tail 1 23201 24883
YP_009302943.1 NC_031250_p24 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 12679 13179
YP_009302959.1 NC_031250_p40 hypothetical protein phrog_11 baseplate spike tail 1 27069 27716
YP_009302965.1 NC_031250_p46 hypothetical protein phrog_136 tail fiber assembly protein tail 1 31799 32302
YP_009302920.1 NC_031250_p1 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 205 636
YP_009302968.1 NC_031250_p49 hypothetical protein phrog_214 Rz-like spanin lysis 1 33164 33493
YP_009302931.1 NC_031250_p12 hypothetical protein singleton unknown function unknown function -1 3393 3572
YP_009302921.1 NC_031250_p2 hypothetical protein phrog_32337 unknown function unknown function -1 633 818
YP_009302949.1 NC_031250_p30 hypothetical protein phrog_215 structural protein with Ig domain head and packaging 1 18143 18781
YP_009302929.1 NC_031250_p10 hypothetical protein phrog_35350 unknown function unknown function -1 2508 2666
YP_009302982.1 NC_031250_p63 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 43133 43618
YP_009302941.1 NC_031250_p22 scaffold protein phrog_206 head scaffolding protein head and packaging 1 10879 11592
YP_009302992.1 NC_031250_p73 hypothetical protein singleton unknown function unknown function -1 48404 48772
YP_009302966.1 NC_031250_p47 hypothetical protein phrog_1350 holin lysis 1 32405 32665
YP_009302940.1 NC_031250_p21 portal protein phrog_145 portal protein head and packaging 1 9139 10701
YP_009302927.1 NC_031250_p8 hypothetical protein phrog_29626 unknown function unknown function -1 2075 2248
YP_009302948.1 NC_031250_p29 tail protein phrog_2871 tail protein tail 1 15118 18075
YP_009302975.1 NC_031250_p56 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other -1 38103 38696
YP_009302928.1 NC_031250_p9 hypothetical protein phrog_35114 unknown function unknown function -1 2245 2502
YP_009302970.1 NC_031250_p51 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 33711 33935
YP_009302979.1 NC_031250_p60 hypothetical protein phrog_23504 unknown function unknown function -1 40334 40555
YP_009302938.1 NC_031250_p19 hypothetical protein phrog_38712 unknown function unknown function 1 7395 7685
YP_009302988.1 NC_031250_p69 hypothetical protein phrog_28927 unknown function unknown function -1 47023 47313
YP_009302984.1 NC_031250_p65 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 44333 45217
YP_009302934.1 NC_031250_p15 hypothetical protein phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 5034 5708
YP_009302922.1 NC_031250_p3 hypothetical protein phrog_34345 unknown function unknown function -1 815 994
YP_009302976.1 NC_031250_p57 hypothetical protein phrog_36727 unknown function unknown function -1 38683 39081
YP_009302963.1 NC_031250_p44 hypothetical protein phrog_30316 tail fiber protein tail 1 29909 31243
YP_009302962.1 NC_031250_p43 hypothetical protein phrog_587 structural protein head and packaging 1 29263 29916
YP_009302932.1 NC_031250_p13 hypothetical protein singleton unknown function unknown function -1 3587 3736
YP_009302953.1 NC_031250_p34 hypothetical protein phrog_6419 unknown function unknown function 1 22610 23038
YP_009302950.1 NC_031250_p31 hypothetical protein phrog_28902 major tail protein tail 1 18793 20922
YP_009302958.1 NC_031250_p39 hypothetical protein phrog_196 baseplate hub tail 1 26110 27069
YP_009302937.1 NC_031250_p18 hypothetical protein phrog_29999 unknown function unknown function 1 6927 7217
YP_009302994.1 NC_031250_p75 hypothetical protein phrog_28429 unknown function unknown function 1 49374 49706