Genomic map of Gordonia phage SoilAssassin (NC_031251)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031251
Definition
Gordonia phage SoilAssassin, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Attisvirus; unclassified Attisvirus.
DB of origin
REFSEQ
Length
47880
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
74
%GC
66.81
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009303059.1 NC_031251_p64 HNH endonuclease phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43104 43649
YP_009303046.1 NC_031251_p51 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 35972 36847
YP_009303004.1 NC_031251_p9 hypothetical protein phrog_3881 head-tail connector protein connector 1 6508 6834
YP_009303026.1 NC_031251_p31 hypothetical protein phrog_18428 unknown function unknown function -1 26035 26388
YP_009303042.1 NC_031251_p47 hypothetical protein phrog_204 unknown function unknown function 1 34034 34456
YP_009303060.1 NC_031251_p65 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 43650 44540
YP_009303045.1 NC_031251_p50 hypothetical protein phrog_2857 tail fiber protein tail 1 35667 35975
YP_009303021.1 NC_031251_p26 hypothetical protein phrog_36698 unknown function unknown function 1 22006 22284
YP_009303047.1 NC_031251_p52 ssDNA binding protein phrog_4171 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 36844 37989
YP_009303013.1 NC_031251_p18 lysin A phrog_2998 endolysin lysis 1 16527 17654
YP_009303048.1 NC_031251_p53 hypothetical protein phrog_15664 unknown function unknown function 1 37986 38855
YP_009303043.1 NC_031251_p48 hypothetical protein phrog_210 unknown function unknown function 1 34460 35311
YP_009303053.1 NC_031251_p58 hypothetical protein phrog_7793 unknown function unknown function 1 40272 40415
YP_009303025.1 NC_031251_p30 hypothetical protein phrog_35745 unknown function unknown function -1 25461 25985
YP_009303037.1 NC_031251_p42 hypothetical protein phrog_17511 unknown function unknown function 1 31885 32433
YP_009303068.1 NC_031251_p73 hypothetical protein phrog_10381 unknown function unknown function 1 47174 47503
YP_009303064.1 NC_031251_p69 HTH DNA-binding domain protein phrog_908 unknown function unknown function 1 45644 46315
YP_009302997.1 NC_031251_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 318 1889
YP_009303069.1 NC_031251_p74 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 47513 47821
YP_009303057.1 NC_031251_p62 hypothetical protein singleton unknown function unknown function 1 42332 42904
YP_009302996.1 NC_031251_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 14 346
YP_009303039.1 NC_031251_p44 hypothetical protein phrog_7723 unknown function unknown function 1 33315 33542
YP_009303020.1 NC_031251_p25 minor tail protein phrog_2689 minor tail protein tail 1 20498 22021
YP_009303055.1 NC_031251_p60 hypothetical protein phrog_464 unknown function unknown function 1 40972 41337
YP_009303008.1 NC_031251_p13 tail assembly chaperone phrog_3860 tail assembly chaperone tail 1 8361 9089
YP_009303017.1 NC_031251_p22 membrane protein phrog_2344 unknown function unknown function 1 18967 19413
YP_009302998.1 NC_031251_p3 portal protein phrog_113 portal protein head and packaging 1 1903 3252
YP_009303056.1 NC_031251_p61 HTH DNA-binding protein phrog_1590 unknown function unknown function 1 41334 42335
YP_009303029.1 NC_031251_p34 integrase phrog_1 integrase integration and excision 1 27695 28777
YP_009303032.1 NC_031251_p37 hypothetical protein phrog_5316 unknown function unknown function -1 29642 29863
YP_009303051.1 NC_031251_p56 hypothetical protein phrog_1138 unknown function unknown function 1 39407 40009
YP_009303031.1 NC_031251_p36 MazE antitoxin phrog_19414 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 29250 29564
YP_009303036.1 NC_031251_p41 hypothetical protein phrog_16839 unknown function unknown function 1 31730 31888
YP_009303023.1 NC_031251_p28 minor tail protein phrog_8780 minor tail protein tail 1 22589 24844
YP_009303000.1 NC_031251_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4464 4826
YP_009303040.1 NC_031251_p45 hypothetical protein phrog_1840 excisionase integration and excision 1 33539 33829
YP_009303009.1 NC_031251_p14 tail assembly chaperone phrog_3860 tail assembly chaperone tail 1 9070 9504
YP_009303005.1 NC_031251_p10 hypothetical protein phrog_556 minor head protein head and packaging 1 6834 7160
YP_009303022.1 NC_031251_p27 hypothetical protein phrog_1126 unknown function unknown function 1 22281 22592
YP_009303050.1 NC_031251_p55 hypothetical protein phrog_419 unknown function unknown function 1 39034 39414
YP_009303038.1 NC_031251_p43 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 32482 33318
YP_009303041.1 NC_031251_p46 hypothetical protein phrog_9213 unknown function unknown function 1 33826 34029
YP_009303028.1 NC_031251_p33 hypothetical protein phrog_25640 unknown function unknown function -1 26824 27393
YP_009303066.1 NC_031251_p71 hypothetical protein phrog_23771 unknown function unknown function 1 46619 46807
YP_009303019.1 NC_031251_p24 lysin B phrog_102 endolysin lysis 1 19791 20498
YP_009303003.1 NC_031251_p8 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 6128 6511
YP_009303034.1 NC_031251_p39 immunity repressor phrog_6288 unknown function unknown function -1 30342 31301
YP_009303027.1 NC_031251_p32 hypothetical protein phrog_17063 toxin moron, auxiliary metabolic gene and host takeover -1 26388 26624
YP_009303044.1 NC_031251_p49 hypothetical protein phrog_6877 unknown function unknown function 1 35308 35670
YP_009303014.1 NC_031251_p19 hypothetical protein phrog_19300 unknown function unknown function 1 17679 18002
YP_009303067.1 NC_031251_p72 hypothetical protein phrog_9543 unknown function unknown function 1 46800 47177
YP_009303052.1 NC_031251_p57 hypothetical protein singleton unknown function unknown function 1 40006 40275
YP_009303016.1 NC_031251_p21 hypothetical protein phrog_2272 unknown function unknown function 1 18545 18967
YP_009303006.1 NC_031251_p11 hypothetical protein phrog_2595 head-tail connector protein connector 1 7161 7622
YP_009303007.1 NC_031251_p12 major tail subunit phrog_3884 major tail protein tail 1 7619 8356
YP_009303033.1 NC_031251_p38 hypothetical protein phrog_87 metallo-protease other -1 29863 30279
YP_009303011.1 NC_031251_p16 minor tail protein phrog_106 minor tail protein tail 1 13903 14751
YP_009303035.1 NC_031251_p40 HTH DNA-binding protein phrog_6463 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 31416 31733
YP_009303001.1 NC_031251_p6 major capsid subunit phrog_1650 major head protein head and packaging 1 4854 5777
YP_009303065.1 NC_031251_p70 hypothetical protein phrog_26578 unknown function unknown function 1 46335 46607
YP_009303061.1 NC_031251_p66 hypothetical protein phrog_6055 unknown function unknown function 1 44537 45031
YP_009303030.1 NC_031251_p35 hypothetical protein phrog_21927 unknown function unknown function -1 28792 29166
YP_009303063.1 NC_031251_p68 hypothetical protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 45279 45647
YP_009302999.1 NC_031251_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3246 4460
YP_009303062.1 NC_031251_p67 hypothetical protein phrog_14741 unknown function unknown function 1 45028 45282
YP_009303058.1 NC_031251_p63 hypothetical protein phrog_10621 unknown function unknown function 1 42905 43114
YP_009303002.1 NC_031251_p7 head-to-tail connector protein phrog_2322 head-tail connector protein connector 1 5774 6121
YP_009303015.1 NC_031251_p20 hypothetical protein phrog_9752 holin lysis 1 18033 18548
YP_009303018.1 NC_031251_p23 membrane protein phrog_19565 membrane protein moron, auxiliary metabolic gene and host takeover 1 19417 19794
YP_009303049.1 NC_031251_p54 hypothetical protein phrog_10709 unknown function unknown function 1 38852 39037
YP_009303012.1 NC_031251_p17 minor tail protein phrog_110 minor tail protein tail 1 14751 16460
YP_009303054.1 NC_031251_p59 hypothetical protein singleton unknown function unknown function 1 40412 40972
YP_009303010.1 NC_031251_p15 tape measure protein phrog_9228 tail length tape measure protein tail 1 9497 13906
YP_009303024.1 NC_031251_p29 hypothetical protein phrog_7114 minor tail protein tail 1 24850 25548