| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031252 |
Definition |
Arthrobacter phage BarretLemon, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Marthavirus; Arthrobacter virus BarretLemon. |
DB of origin |
REFSEQ |
Length |
51290 |
Host Name |
Arthrobacter sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
79 |
%GC |
60.9 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009303136.1 | NC_031252_p67 | hypothetical protein | phrog_18133 | unknown function | unknown function | 1 | 43635 | 43826 |
| YP_009303134.1 | NC_031252_p65 | hypothetical protein | phrog_9132 | unknown function | unknown function | 1 | 43022 | 43465 |
| YP_009303118.1 | NC_031252_p49 | hypothetical protein | phrog_8872 | unknown function | unknown function | 1 | 36985 | 37272 |
| YP_009303088.1 | NC_031252_p19 | tape measure | phrog_971 | endolysin | lysis | 1 | 13749 | 16382 |
| YP_009303138.1 | NC_031252_p69 | DNA binding protein | phrog_620 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 44545 | 45120 |
| YP_009303070.1 | NC_031252_p1 | HTH DNA binding protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 21 | 470 |
| YP_009303078.1 | NC_031252_p9 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 7550 | 8437 |
| YP_009303107.1 | NC_031252_p38 | HTH DNA binding protein | phrog_7061 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31643 | 31858 |
| YP_009303119.1 | NC_031252_p50 | hypothetical protein | phrog_13447 | unknown function | unknown function | 1 | 37269 | 37487 |
| YP_009303131.1 | NC_031252_p62 | DNA binding protein | phrog_9045 | unknown function | unknown function | 1 | 41411 | 41761 |
| YP_009303076.1 | NC_031252_p7 | scaffolding protein | phrog_3894 | head maturation protease | head and packaging | 1 | 5958 | 7103 |
| YP_009303083.1 | NC_031252_p14 | hypothetical protein | phrog_9144 | unknown function | unknown function | 1 | 10650 | 10889 |
| YP_009303084.1 | NC_031252_p15 | tail sheath protein | phrog_23 | tail sheath | tail | 1 | 10892 | 12343 |
| YP_009303116.1 | NC_031252_p47 | hypothetical protein | phrog_9025 | unknown function | unknown function | 1 | 36189 | 36578 |
| YP_009303075.1 | NC_031252_p6 | hypothetical protein | phrog_14229 | unknown function | unknown function | -1 | 5593 | 5829 |
| YP_009303090.1 | NC_031252_p21 | tail protein | phrog_52 | tail protein | tail | 1 | 17047 | 18387 |
| YP_009303114.1 | NC_031252_p45 | hypothetical protein | phrog_9520 | unknown function | unknown function | 1 | 35119 | 35763 |
| YP_009303128.1 | NC_031252_p59 | hypothetical protein | phrog_9753 | unknown function | unknown function | 1 | 40663 | 40857 |
| YP_009303101.1 | NC_031252_p32 | tail protein | phrog_9229 | tail protein | tail | 1 | 27189 | 28472 |
| YP_009303096.1 | NC_031252_p27 | holin | phrog_5480 | unknown function | unknown function | 1 | 23327 | 23740 |
| YP_009303137.1 | NC_031252_p68 | hypothetical protein | phrog_5264 | unknown function | unknown function | 1 | 43928 | 44548 |
| YP_009303122.1 | NC_031252_p53 | hypothetical protein | phrog_5352 | unknown function | unknown function | 1 | 38160 | 38453 |
| YP_009303082.1 | NC_031252_p13 | hypothetical protein | phrog_5178 | unknown function | unknown function | 1 | 9981 | 10592 |
| YP_009303125.1 | NC_031252_p56 | HTH DNA binding protein | phrog_9070 | unknown function | unknown function | 1 | 39955 | 40218 |
| YP_009303089.1 | NC_031252_p20 | LysM | phrog_380 | endolysin | lysis | 1 | 16382 | 17047 |
| YP_009303071.1 | NC_031252_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 467 | 1936 |
| YP_009303104.1 | NC_031252_p35 | RecT-like recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 29827 | 30672 |
| YP_009303117.1 | NC_031252_p48 | hypothetical protein | phrog_7314 | unknown function | unknown function | 1 | 36575 | 36988 |
| YP_009303113.1 | NC_031252_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34970 | 35122 |
| YP_009303141.1 | NC_031252_p72 | AlpA-like DNA binding protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 46214 | 46543 |
| YP_009303123.1 | NC_031252_p54 | hypothetical protein | phrog_9121 | unknown function | unknown function | 1 | 38516 | 38890 |
| YP_009303146.1 | NC_031252_p77 | hypothetical protein | phrog_31446 | unknown function | unknown function | -1 | 49319 | 49819 |
| YP_009303111.1 | NC_031252_p42 | RusA-like protein | phrog_9203 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 34040 | 34525 |
| YP_009303072.1 | NC_031252_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 1978 | 3444 |
| YP_009303077.1 | NC_031252_p8 | hypothetical protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 7142 | 7528 |
| YP_009303110.1 | NC_031252_p41 | hypothetical protein | phrog_8936 | unknown function | unknown function | 1 | 33490 | 34032 |
| YP_009303144.1 | NC_031252_p75 | hypothetical protein | phrog_12308 | unknown function | unknown function | -1 | 48629 | 48844 |
| YP_009303100.1 | NC_031252_p31 | baseplate J-like protein | phrog_6 | baseplate wedge subunit | tail | 1 | 26059 | 27189 |
| YP_009303081.1 | NC_031252_p12 | head-to-tail connector | phrog_26 | tail completion or Neck1 protein | connector | 1 | 9514 | 9981 |
| YP_009303121.1 | NC_031252_p52 | hypothetical protein | phrog_5352 | unknown function | unknown function | 1 | 37854 | 38150 |
| YP_009303092.1 | NC_031252_p23 | minor tail protein | phrog_5207 | unknown function | unknown function | 1 | 18796 | 20910 |
| YP_009303129.1 | NC_031252_p60 | hypothetical protein | phrog_8873 | unknown function | unknown function | 1 | 40898 | 41215 |
| YP_009303079.1 | NC_031252_p10 | hypothetical protein | phrog_9354 | unknown function | unknown function | 1 | 8454 | 8990 |
| YP_009303095.1 | NC_031252_p26 | hypothetical protein | phrog_5303 | unknown function | unknown function | 1 | 23109 | 23330 |
| YP_009303127.1 | NC_031252_p58 | hypothetical protein | phrog_9184 | unknown function | unknown function | 1 | 40379 | 40663 |
| YP_009303086.1 | NC_031252_p17 | hypothetical protein | phrog_5088 | tail assembly chaperone | tail | 1 | 12966 | 13523 |
| YP_009303102.1 | NC_031252_p33 | hypothetical protein | phrog_9182 | unknown function | unknown function | 1 | 28674 | 28808 |
| YP_009303103.1 | NC_031252_p34 | exonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28805 | 29824 |
| YP_009303106.1 | NC_031252_p37 | single-stranded DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30898 | 31434 |
| YP_009303142.1 | NC_031252_p73 | DNA polymerase III beta subunit | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 46577 | 47845 |
| YP_009303112.1 | NC_031252_p43 | hypothetical protein | phrog_13477 | unknown function | unknown function | 1 | 34573 | 34908 |
| YP_009303133.1 | NC_031252_p64 | hypothetical protein | phrog_9283 | unknown function | unknown function | 1 | 42642 | 43019 |
| YP_009303135.1 | NC_031252_p66 | hypothetical protein | phrog_15185 | unknown function | unknown function | 1 | 43462 | 43638 |
| YP_009303132.1 | NC_031252_p63 | hypothetical protein | phrog_9225 | unknown function | unknown function | 1 | 41758 | 42645 |
| YP_009303074.1 | NC_031252_p5 | hypothetical protein | phrog_3585 | immunity protein | other | 1 | 5150 | 5470 |
| YP_009303109.1 | NC_031252_p40 | hypothetical protein | phrog_9073 | unknown function | unknown function | 1 | 32666 | 33493 |
| YP_009303130.1 | NC_031252_p61 | hypothetical protein | phrog_12068 | unknown function | unknown function | 1 | 41208 | 41414 |
| YP_009303093.1 | NC_031252_p24 | minor tail protein | phrog_5231 | unknown function | unknown function | 1 | 20966 | 22825 |
| YP_009303094.1 | NC_031252_p25 | hypothetical protein | phrog_4565 | unknown function | unknown function | 1 | 22825 | 23112 |
| YP_009303097.1 | NC_031252_p28 | endolysin | phrog_7470 | amidase | lysis | 1 | 23730 | 25319 |
| YP_009303147.1 | NC_031252_p78 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 49933 | 50937 |
| YP_009303098.1 | NC_031252_p29 | hypothetical protein | phrog_4316 | unknown function | unknown function | 1 | 25316 | 25687 |
| YP_009303145.1 | NC_031252_p76 | hypothetical protein | phrog_25749 | unknown function | unknown function | -1 | 48929 | 49300 |
| YP_009303124.1 | NC_031252_p55 | hypothetical protein | phrog_9308 | unknown function | unknown function | 1 | 38987 | 39955 |
| YP_009303148.1 | NC_031252_p79 | hypothetical protein | phrog_14419 | unknown function | unknown function | -1 | 51007 | 51240 |
| YP_009303073.1 | NC_031252_p4 | hypothetical protein | phrog_595 | head maturation protease | head and packaging | 1 | 3437 | 5149 |
| YP_009303115.1 | NC_031252_p46 | hypothetical protein | phrog_8957 | unknown function | unknown function | 1 | 35756 | 36196 |
| YP_009303085.1 | NC_031252_p16 | hypothetical protein | phrog_5102 | tail tube protein | tail | 1 | 12357 | 12779 |
| YP_009303108.1 | NC_031252_p39 | HTH DNA binding protein | phrog_8064 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 31855 | 32391 |
| YP_009303087.1 | NC_031252_p18 | hypothetical protein | phrog_14573 | unknown function | unknown function | 1 | 13553 | 13729 |
| YP_009303080.1 | NC_031252_p11 | hypothetical protein | phrog_5280 | unknown function | unknown function | 1 | 8997 | 9509 |
| YP_009303099.1 | NC_031252_p30 | tail lysozyme | phrog_5026 | baseplate protein | tail | 1 | 25731 | 26066 |
| YP_009303140.1 | NC_031252_p71 | hypothetical protein | phrog_1384 | Mom-like DNA modification protein | other | 1 | 45350 | 45970 |
| YP_009303143.1 | NC_031252_p74 | hypothetical protein | phrog_9278 | unknown function | unknown function | -1 | 47917 | 48561 |
| YP_009303091.1 | NC_031252_p22 | hypothetical protein | phrog_5161 | unknown function | unknown function | 1 | 18387 | 18791 |
| YP_009303126.1 | NC_031252_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40215 | 40382 |
| YP_009303139.1 | NC_031252_p70 | hypothetical protein | phrog_9461 | unknown function | unknown function | 1 | 45120 | 45353 |
| YP_009303105.1 | NC_031252_p36 | HTH DNA binding protein | phrog_6156 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 30665 | 30898 |
| YP_009303120.1 | NC_031252_p51 | hypothetical protein | phrog_10565 | unknown function | unknown function | 1 | 37577 | 37825 |