Genomic map of Mycobacterium phage Bipper (NC_031253)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031253
Definition
Mycobacterium phage Bipper, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
77832
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
135
%GC
67.34
Number of singletons
62
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009303200.1 NC_031253_p52 hypothetical protein singleton unknown function unknown function 1 40411 40809
YP_009303181.1 NC_031253_p33 lysin A amidase domain singleton unknown function unknown function 1 28999 29529
YP_009303262.1 NC_031253_p114 hypothetical protein singleton unknown function unknown function 1 69240 69665
YP_009303221.1 NC_031253_p73 hypothetical protein singleton unknown function unknown function 1 50020 50178
YP_009303256.1 NC_031253_p108 hypothetical protein singleton unknown function unknown function 1 66479 66748
YP_009303154.1 NC_031253_p6 QueE-like queosine biosynthesis protein phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover 1 2984 3697
YP_009303242.1 NC_031253_p94 hypothetical protein phrog_464 unknown function unknown function 1 60239 60613
YP_009303279.1 NC_031253_p131 hypothetical protein singleton unknown function unknown function 1 75294 75482
YP_009303232.1 NC_031253_p84 hypothetical protein phrog_6055 unknown function unknown function 1 55593 56150
YP_009303165.1 NC_031253_p17 head-to-tail connector protein phrog_387 neck protein connector 1 11835 12083
YP_009303183.1 NC_031253_p35 lysin B phrog_102 endolysin lysis 1 30012 31109
YP_009303157.1 NC_031253_p9 terminase phrog_9 terminase large subunit head and packaging 1 4723 6342
YP_009303172.1 NC_031253_p24 Minor tail protein phrog_110 minor tail protein tail 1 19740 21590
YP_009303230.1 NC_031253_p82 hypothetical protein singleton unknown function unknown function 1 54271 54627
YP_009303211.1 NC_031253_p63 RecE exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 44977 45906
YP_009303282.1 NC_031253_p134 hypothetical protein phrog_11690 tail protein tail 1 76603 77106
YP_009303186.1 NC_031253_p38 hypothetical protein singleton unknown function unknown function -1 32062 32253
YP_009303168.1 NC_031253_p20 tail assembly chaperone phrog_3656 tail assembly chaperone tail 1 13191 14053
YP_009303222.1 NC_031253_p74 hypothetical protein singleton unknown function unknown function 1 50278 50688
YP_009303250.1 NC_031253_p102 hypothetical protein singleton unknown function unknown function 1 63404 63940
YP_009303188.1 NC_031253_p40 hypothetical protein singleton unknown function unknown function 1 32610 32864
YP_009303228.1 NC_031253_p80 hypothetical protein phrog_18249 unknown function unknown function 1 53391 53822
YP_009303216.1 NC_031253_p68 hypothetical protein singleton unknown function unknown function 1 48431 48637
YP_009303265.1 NC_031253_p117 hypothetical protein singleton unknown function unknown function 1 70452 70880
YP_009303231.1 NC_031253_p83 HTH DNA binding protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 54628 55608
YP_009303206.1 NC_031253_p58 hypothetical protein singleton unknown function unknown function 1 43122 43274
YP_009303252.1 NC_031253_p104 hypothetical protein singleton unknown function unknown function 1 64332 64925
YP_009303275.1 NC_031253_p127 hypothetical protein singleton unknown function unknown function 1 73803 73994
YP_009303214.1 NC_031253_p66 hypothetical protein phrog_8743 unknown function unknown function 1 47836 48081
YP_009303198.1 NC_031253_p50 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 39576 39965
YP_009303182.1 NC_031253_p34 lysin A peptidase domain singleton unknown function unknown function 1 29566 30009
YP_009303193.1 NC_031253_p45 hypothetical protein singleton unknown function unknown function 1 35667 35939
YP_009303224.1 NC_031253_p76 hypothetical protein phrog_12222 unknown function unknown function 1 50989 51531
YP_009303178.1 NC_031253_p30 hypothetical protein phrog_240 head protein head and packaging 1 27679 28077
YP_009303176.1 NC_031253_p28 Minor tail protein phrog_416 minor tail protein tail 1 26155 27216
YP_009303269.1 NC_031253_p121 hypothetical protein phrog_10520 unknown function unknown function 1 72041 72268
YP_009303276.1 NC_031253_p128 hypothetical protein singleton unknown function unknown function 1 73982 74572
YP_009303199.1 NC_031253_p51 excise phrog_7506 recombination directionality factor integration and excision 1 40190 40414
YP_009303207.1 NC_031253_p59 hypothetical protein singleton unknown function unknown function 1 43271 43468
YP_009303219.1 NC_031253_p71 hypothetical protein singleton unknown function unknown function 1 49405 49824
YP_009303239.1 NC_031253_p91 hypothetical protein singleton unknown function unknown function 1 58688 58915
YP_009303169.1 NC_031253_p21 tail assembly chaperone singleton unknown function unknown function 1 13191 13628
YP_009303201.1 NC_031253_p53 DnaQ exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40859 41473
YP_009303153.1 NC_031253_p5 QueD-like queosine biosynthesis protein phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover 1 2469 2987
YP_009303258.1 NC_031253_p110 hypothetical protein phrog_4095 unknown function unknown function 1 66961 67743
YP_009303251.1 NC_031253_p103 hypothetical protein singleton unknown function unknown function 1 63940 64335
YP_009303155.1 NC_031253_p7 GTP cyclohydrolase I phrog_2197 GTP cyclohydrolase other 1 3694 4320
YP_009303220.1 NC_031253_p72 hypothetical protein singleton unknown function unknown function 1 49821 50030
YP_009303218.1 NC_031253_p70 hypothetical protein singleton unknown function unknown function 1 48953 49408
YP_009303226.1 NC_031253_p78 hypothetical protein phrog_2045 unknown function unknown function 1 52013 52936
YP_009303277.1 NC_031253_p129 hypothetical protein singleton unknown function unknown function 1 74639 74914
YP_009303272.1 NC_031253_p124 hypothetical protein phrog_1454 unknown function unknown function 1 73005 73226
YP_009303194.1 NC_031253_p46 hypothetical protein singleton unknown function unknown function 1 35936 36202
YP_009303205.1 NC_031253_p57 WhiB family transcription factor phrog_1590 unknown function unknown function 1 42349 43125
YP_009303238.1 NC_031253_p90 hypothetical protein singleton unknown function unknown function 1 58299 58685
YP_009303185.1 NC_031253_p37 hypothetical protein phrog_404 minor tail protein tail 1 31449 31997
YP_009303215.1 NC_031253_p67 hypothetical protein phrog_15963 unknown function unknown function 1 48081 48434
YP_009303166.1 NC_031253_p18 head-to-tail connector protein phrog_123 tail terminator connector 1 12080 12517
YP_009303184.1 NC_031253_p36 holin phrog_565 holin lysis 1 31123 31452
YP_009303223.1 NC_031253_p75 hypothetical protein singleton unknown function unknown function 1 50681 50992
YP_009303274.1 NC_031253_p126 hypothetical protein singleton unknown function unknown function 1 73597 73803
YP_009303191.1 NC_031253_p43 hypothetical protein singleton unknown function unknown function 1 34583 35089
YP_009303270.1 NC_031253_p122 hypothetical protein phrog_16631 unknown function unknown function 1 72314 72574
YP_009303281.1 NC_031253_p133 hypothetical protein singleton unknown function unknown function 1 76352 76603
YP_009303192.1 NC_031253_p44 hypothetical protein singleton unknown function unknown function 1 35321 35536
YP_009303180.1 NC_031253_p32 lysin A glycosidase domain phrog_181 endolysin lysis 1 28349 29002
YP_009303171.1 NC_031253_p23 Minor tail protein phrog_106 minor tail protein tail 1 18745 19743
YP_009303151.1 NC_031253_p3 queuine tRNA-ribosyltransferase phrog_887 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 977 2050
YP_009303208.1 NC_031253_p60 hypothetical protein singleton unknown function unknown function 1 43465 43635
YP_009303197.1 NC_031253_p49 integrase phrog_216 integrase integration and excision -1 38347 39303
YP_009303240.1 NC_031253_p92 hypothetical protein phrog_15197 unknown function unknown function 1 58912 59781
YP_009303167.1 NC_031253_p19 major tail subunit phrog_117 major tail protein tail 1 12607 13194
YP_009303150.1 NC_031253_p2 hypothetical protein singleton unknown function unknown function 1 858 980
YP_009303249.1 NC_031253_p101 hypothetical protein singleton unknown function unknown function 1 62988 63407
YP_009303161.1 NC_031253_p13 major capsid protein phrog_2263 major head protein head and packaging 1 9078 10457
YP_009303158.1 NC_031253_p10 hypothetical protein phrog_502 membrane protein moron, auxiliary metabolic gene and host takeover 1 6339 6527
YP_009303212.1 NC_031253_p64 RecT ssDNA binding protein phrog_4171 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45903 47054
YP_009303175.1 NC_031253_p27 Minor tail protein phrog_746 minor tail protein tail 1 23567 26155
YP_009303247.1 NC_031253_p99 hypothetical protein singleton unknown function unknown function 1 62378 62647
YP_009303243.1 NC_031253_p95 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 60606 61649
YP_009303173.1 NC_031253_p25 Minor tail protein phrog_1697 minor tail protein tail 1 21590 22132
YP_009303233.1 NC_031253_p85 hypothetical protein singleton unknown function unknown function 1 56147 56536
YP_009303257.1 NC_031253_p109 hypothetical protein singleton unknown function unknown function 1 66745 66912
YP_009303271.1 NC_031253_p123 hypothetical protein singleton unknown function unknown function 1 72619 73077
YP_009303260.1 NC_031253_p112 hypothetical protein singleton unknown function unknown function 1 68447 68824
YP_009303189.1 NC_031253_p41 ribonuclease toxin singleton unknown function unknown function 1 33066 33305
YP_009303280.1 NC_031253_p132 hypothetical protein singleton unknown function unknown function 1 75479 76348
YP_009303160.1 NC_031253_p12 capsid maturation protease phrog_80 head maturation protease head and packaging 1 7870 8895
YP_009303209.1 NC_031253_p61 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43632 43982
YP_009303263.1 NC_031253_p115 hypothetical protein singleton unknown function unknown function 1 69662 70117
YP_009303264.1 NC_031253_p116 hypothetical protein singleton unknown function unknown function 1 70114 70455
YP_009303217.1 NC_031253_p69 hypothetical protein singleton unknown function unknown function 1 48640 48939
YP_009303162.1 NC_031253_p14 head-to-tail connector protein singleton unknown function unknown function 1 10526 10927
YP_009303187.1 NC_031253_p39 HTH DNA binding protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 32362 32613
YP_009303245.1 NC_031253_p97 hypothetical protein singleton unknown function unknown function 1 61963 62160
YP_009303164.1 NC_031253_p16 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 11461 11835
YP_009303229.1 NC_031253_p81 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 53819 54274
YP_009303203.1 NC_031253_p55 hypothetical protein singleton unknown function unknown function 1 41829 42065
YP_009303177.1 NC_031253_p29 hypothetical protein singleton unknown function unknown function 1 27229 27660
YP_009303156.1 NC_031253_p8 RNaseE phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 4317 4760
YP_009303202.1 NC_031253_p54 hypothetical protein singleton unknown function unknown function 1 41473 41832
YP_009303163.1 NC_031253_p15 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 10931 11461
YP_009303195.1 NC_031253_p47 antitoxin phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 36333 36854
YP_009303190.1 NC_031253_p42 hypothetical protein singleton unknown function unknown function 1 33472 34419
YP_009303213.1 NC_031253_p65 hypothetical protein phrog_25539 unknown function unknown function 1 47051 47836
YP_009303149.1 NC_031253_p1 DNA binding protein phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 202 861
YP_009303246.1 NC_031253_p98 hypothetical protein phrog_1581 unknown function unknown function 1 62157 62378
YP_009303236.1 NC_031253_p88 hypothetical protein phrog_2903 unknown function unknown function 1 57383 57655
YP_009303179.1 NC_031253_p31 hypothetical protein phrog_1042 unknown function unknown function 1 28074 28352
YP_009303227.1 NC_031253_p79 ACSH domain containing protein phrog_3193 unknown function unknown function 1 52933 53394
YP_009303244.1 NC_031253_p96 hypothetical protein phrog_2021 unknown function unknown function 1 61646 61966
YP_009303267.1 NC_031253_p119 hypothetical protein singleton unknown function unknown function 1 71417 71773
YP_009303266.1 NC_031253_p118 hypothetical protein phrog_658 unknown function unknown function 1 70930 71304
YP_009303159.1 NC_031253_p11 portal protein phrog_12 portal protein head and packaging 1 6524 7870
YP_009303241.1 NC_031253_p93 hypothetical protein singleton unknown function unknown function 1 59778 60242
YP_009303170.1 NC_031253_p22 tapemeasure phrog_10780 tail length tape measure protein tail 1 14060 18745
YP_009303255.1 NC_031253_p107 hypothetical protein singleton unknown function unknown function 1 65433 66482
YP_009303253.1 NC_031253_p105 hypothetical protein phrog_1969 unknown function unknown function 1 64925 65332
YP_009303196.1 NC_031253_p48 hypothetical protein phrog_1362 unknown function unknown function 1 37023 38222
YP_009303278.1 NC_031253_p130 AAA-ATPase phrog_3167 unknown function unknown function 1 74914 75294
YP_009303152.1 NC_031253_p4 hypothetical protein singleton unknown function unknown function 1 2047 2472
YP_009303225.1 NC_031253_p77 hypothetical protein phrog_3230 unknown function unknown function 1 51528 52016
YP_009303237.1 NC_031253_p89 Metallophosphoesterase phrog_547 phosphoesterase other 1 57652 58302
YP_009303234.1 NC_031253_p86 hypothetical protein singleton unknown function unknown function 1 56533 56817
YP_009303254.1 NC_031253_p106 hypothetical protein singleton unknown function unknown function 1 65329 65436
YP_009303235.1 NC_031253_p87 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 56814 57383
YP_009303210.1 NC_031253_p62 HTH DNA binding protein phrog_5931 unknown function unknown function 1 44027 44980
YP_009303283.1 NC_031253_p135 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 77103 77429
YP_009303268.1 NC_031253_p120 hypothetical protein phrog_2974 unknown function unknown function 1 71808 72044
YP_009303204.1 NC_031253_p56 hypothetical protein phrog_15181 unknown function unknown function 1 42062 42352
YP_009303259.1 NC_031253_p111 hypothetical protein phrog_8241 unknown function unknown function 1 67816 68256
YP_009303261.1 NC_031253_p113 hypothetical protein singleton unknown function unknown function 1 68839 69243
YP_009303174.1 NC_031253_p26 Minor tail protein phrog_1565 minor tail protein tail 1 22137 23567
YP_009303273.1 NC_031253_p125 hypothetical protein singleton unknown function unknown function 1 73223 73600
YP_009303248.1 NC_031253_p100 hypothetical protein singleton unknown function unknown function 1 62644 62991