Genomic map of Gordonia phage Schwabeltier (NC_031255)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031255
Definition
Gordonia phage Schwabeltier, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Schnabeltiervirus; Gordonia virus Schnabeltier.
DB of origin
REFSEQ
Length
46895
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
67.03
Number of singletons
14
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009303414.1 NC_031255_p31 hypothetical protein phrog_22254 unknown function unknown function -1 27802 27945
YP_009303454.1 NC_031255_p71 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46465 46803
YP_009303401.1 NC_031255_p18 minor tail protein phrog_106 minor tail protein tail 1 16103 16966
YP_009303433.1 NC_031255_p50 hypothetical protein singleton unknown function unknown function 1 35571 35759
YP_009303386.1 NC_031255_p3 portal protein phrog_113 portal protein head and packaging 1 2188 3597
YP_009303436.1 NC_031255_p53 hypothetical protein singleton unknown function unknown function 1 36587 36775
YP_009303423.1 NC_031255_p40 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 32092 32529
YP_009303429.1 NC_031255_p46 hypothetical protein phrog_18626 unknown function unknown function 1 34202 34501
YP_009303390.1 NC_031255_p7 head-to-tail connector protein phrog_2322 head-tail connector protein connector 1 6339 6827
YP_009303446.1 NC_031255_p63 hypothetical protein singleton unknown function unknown function 1 42094 42252
YP_009303421.1 NC_031255_p38 integrase phrog_1 integrase integration and excision -1 30718 31608
YP_009303416.1 NC_031255_p33 hypothetical protein singleton unknown function unknown function -1 28437 28925
YP_009303415.1 NC_031255_p32 hypothetical protein singleton unknown function unknown function 1 28087 28569
YP_009303385.1 NC_031255_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 521 2170
YP_009303408.1 NC_031255_p25 membrane protein phrog_3798 unknown function unknown function 1 21381 21758
YP_009303388.1 NC_031255_p5 hypothetical protein phrog_673 head scaffolding protein head and packaging 1 5040 5414
YP_009303413.1 NC_031255_p30 hypothetical protein singleton unknown function unknown function -1 26561 27733
YP_009303412.1 NC_031255_p29 hypothetical protein phrog_17388 minor tail protein tail 1 24627 26651
YP_009303404.1 NC_031255_p21 lysin A phrog_2998 endolysin lysis 1 19238 20347
YP_009303411.1 NC_031255_p28 minor tail protein phrog_8055 unknown function unknown function 1 24294 24623
YP_009303384.1 NC_031255_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 167 517
YP_009303434.1 NC_031255_p51 hypothetical protein phrog_24063 unknown function unknown function 1 35759 36136
YP_009303405.1 NC_031255_p22 membrane protein phrog_443 holin lysis 1 20375 20860
YP_009303428.1 NC_031255_p45 hypothetical protein phrog_8218 unknown function unknown function 1 34053 34205
YP_009303439.1 NC_031255_p56 hypothetical protein singleton unknown function unknown function 1 38435 38821
YP_009303420.1 NC_031255_p37 hypothetical protein phrog_19157 unknown function unknown function 1 30216 30710
YP_009303431.1 NC_031255_p48 hypothetical protein phrog_20407 unknown function unknown function 1 34802 35221
YP_009303430.1 NC_031255_p47 hypothetical protein phrog_15317 unknown function unknown function 1 34498 34809
YP_009303389.1 NC_031255_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5428 6339
YP_009303451.1 NC_031255_p68 hypothetical protein phrog_16713 unknown function unknown function 1 44620 45414
YP_009303406.1 NC_031255_p23 membrane protein phrog_4511 unknown function unknown function 1 20857 21159
YP_009303394.1 NC_031255_p11 head-to-tail connector protein phrog_6485 tail terminator connector 1 7835 8233
YP_009303427.1 NC_031255_p44 hypothetical protein singleton unknown function unknown function 1 33733 33987
YP_009303417.1 NC_031255_p34 hypothetical protein phrog_22338 unknown function unknown function -1 29056 29670
YP_009303441.1 NC_031255_p58 hypothetical protein phrog_20160 unknown function unknown function 1 39855 40178
YP_009303387.1 NC_031255_p4 hypothetical protein phrog_3894 head maturation protease head and packaging 1 3594 5036
YP_009303399.1 NC_031255_p16 hypothetical protein phrog_25082 unknown function unknown function 1 10452 10886
YP_009303395.1 NC_031255_p12 major tail protein phrog_10909 major tail protein tail 1 8326 9168
YP_009303426.1 NC_031255_p43 hypothetical protein phrog_35824 unknown function unknown function 1 33377 33736
YP_009303445.1 NC_031255_p62 exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 41372 42097
YP_009303392.1 NC_031255_p9 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 7206 7541
YP_009303407.1 NC_031255_p24 hypothetical protein phrog_17044 unknown function unknown function 1 21159 21371
YP_009303397.1 NC_031255_p14 tail assembly chaperone phrog_5813 tail assembly chaperone tail 1 9598 10436
YP_009303425.1 NC_031255_p42 hypothetical protein singleton unknown function unknown function 1 32805 33380
YP_009303402.1 NC_031255_p19 minor tail protein phrog_110 minor tail protein tail 1 16963 18693
YP_009303440.1 NC_031255_p57 DNA translocase phrog_12598 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 38818 39858
YP_009303410.1 NC_031255_p27 minor tail protein phrog_737 minor tail protein tail 1 22465 24297
YP_009303453.1 NC_031255_p70 HTH DNA-binding protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 46220 46468
YP_009303400.1 NC_031255_p17 tape measure protein phrog_4197 tail length tape measure protein tail 1 10933 16047
YP_009303447.1 NC_031255_p64 hypothetical protein singleton unknown function unknown function 1 42227 42502
YP_009303448.1 NC_031255_p65 HNH endonuclease phrog_15463 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42563 43924
YP_009303442.1 NC_031255_p59 hypothetical protein singleton unknown function unknown function 1 40175 40549
YP_009303393.1 NC_031255_p10 head-to-tail connector protein phrog_8079 neck protein connector 1 7548 7838
YP_009303437.1 NC_031255_p54 DNA-binding protein phrog_6218 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 36779 38296
YP_009303450.1 NC_031255_p67 hypothetical protein singleton unknown function unknown function 1 44316 44633
YP_009303444.1 NC_031255_p61 hypothetical protein phrog_16850 unknown function unknown function 1 41019 41375
YP_009303409.1 NC_031255_p26 lysin B phrog_102 endolysin lysis 1 21755 22468
YP_009303443.1 NC_031255_p60 hypothetical protein phrog_31259 unknown function unknown function 1 40546 41022
YP_009303438.1 NC_031255_p55 hypothetical protein phrog_33323 unknown function unknown function 1 38299 38445
YP_009303419.1 NC_031255_p36 hypothetical protein singleton unknown function unknown function -1 30063 30194
YP_009303435.1 NC_031255_p52 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 36133 36540
YP_009303432.1 NC_031255_p49 hypothetical protein phrog_20805 unknown function unknown function 1 35214 35543
YP_009303452.1 NC_031255_p69 hypothetical protein phrog_1467 unknown function unknown function 1 45411 46112
YP_009303418.1 NC_031255_p35 hypothetical protein phrog_26576 unknown function unknown function -1 29685 29993
YP_009303396.1 NC_031255_p13 hypothetical protein phrog_18254 unknown function unknown function 1 9196 9573
YP_009303398.1 NC_031255_p15 tail assembly chaperone phrog_17338 tail assembly chaperone tail 1 9598 10026
YP_009303422.1 NC_031255_p39 hypothetical protein singleton unknown function unknown function -1 31784 32095
YP_009303449.1 NC_031255_p66 hypothetical protein phrog_35289 unknown function unknown function 1 43921 44229
YP_009303424.1 NC_031255_p41 HTH DNA-binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 32611 32805
YP_009303391.1 NC_031255_p8 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 6824 7219
YP_009303403.1 NC_031255_p20 hypothetical protein phrog_22223 unknown function unknown function 1 18705 19151