Genomic map of Salmonella phage BP12A (NC_031258)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031258
Definition
Salmonella phage BP12A, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Berlinvirus; Salmonella virus BP12A.
DB of origin
REFSEQ
Length
39696
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
48.95
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009303655.1 NC_031258_p6 hypothetical protein phrog_8103 unknown function unknown function 1 5443 6012
YP_009303668.1 NC_031258_p19 hypothetical protein phrog_1950 unknown function unknown function 1 13005 13217
YP_009303651.1 NC_031258_p2 hypothetical protein phrog_2385 unknown function unknown function 1 1168 1365
YP_009303678.1 NC_031258_p29 hypothetical protein phrog_1391 unknown function unknown function 1 18543 18818
YP_009303675.1 NC_031258_p26 hypothetical protein phrog_18166 unknown function unknown function 1 16903 17196
YP_009303656.1 NC_031258_p7 hypothetical protein phrog_2490 unknown function unknown function 1 6101 6250
YP_009303658.1 NC_031258_p9 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 6628 7662
YP_009303661.1 NC_031258_p12 bacterial RNA polymerase inhibitor phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 8627 8818
YP_009303674.1 NC_031258_p25 hypothetical protein phrog_1334 unknown function unknown function 1 16697 16906
YP_009303682.1 NC_031258_p33 major capsid protein phrog_267 major head protein head and packaging 1 21886 22920
YP_009303679.1 NC_031258_p30 hypothetical protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 18836 19159
YP_009303670.1 NC_031258_p21 hypothetical protein phrog_4023 unknown function unknown function 1 13623 14039
YP_009303662.1 NC_031258_p13 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8887 9582
YP_009303687.1 NC_031258_p38 DNA injection channel protein B phrog_1339 internal virion protein head and packaging 1 27246 29522
YP_009303653.1 NC_031258_p4 protein kinase phrog_2828 serine-threonine kinase other 1 1527 2630
YP_009303659.1 NC_031258_p10 hypothetical protein phrog_1777 unknown function unknown function 1 7844 8107
YP_009303691.1 NC_031258_p42 DNA packaging protein A phrog_1351 terminase small subunit head and packaging 1 35717 35983
YP_009303669.1 NC_031258_p20 hypothetical protein phrog_2254 unknown function unknown function 1 13231 13533
YP_009303667.1 NC_031258_p18 hypothetical protein singleton unknown function unknown function 1 12830 13012
YP_009303684.1 NC_031258_p35 tail tubular protein B phrog_457 tail protein tail 1 23755 26130
YP_009303650.1 NC_031258_p1 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other 1 669 1166
YP_009303685.1 NC_031258_p36 internal virion protein A phrog_308 internal virion protein head and packaging 1 26210 26626
YP_009303693.1 NC_031258_p44 DNA packaging protein B phrog_38 terminase large subunit head and packaging 1 36523 38280
YP_009303660.1 NC_031258_p11 hypothetical protein phrog_2585 nucleotide kinase other 1 8107 8451
YP_009303692.1 NC_031258_p43 endopeptidase Rz phrog_1327 Rz-like spanin lysis 1 36082 36513
YP_009303681.1 NC_031258_p32 capsid assembly protein phrog_1052 head assembly head and packaging 1 20845 21756
YP_009303652.1 NC_031258_p3 hypothetical protein phrog_10380 unknown function unknown function 1 1349 1513
YP_009303673.1 NC_031258_p24 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 16404 16697
YP_009303654.1 NC_031258_p5 DNA-dependent RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 2704 5355
YP_009303657.1 NC_031258_p8 hypothetical protein phrog_2949 dGTPase inhibitor; target for F exclusion other 1 6250 6522
YP_009303696.1 NC_031258_p47 hypothetical protein phrog_24929 unknown function unknown function 1 39124 39414
YP_009303663.1 NC_031258_p14 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9583 10002
YP_009303694.1 NC_031258_p45 hypothetical protein phrog_6254 HNH endonuclease DNA, RNA and nucleotide metabolism 1 38304 38750
YP_009303686.1 NC_031258_p37 DNA injection channel protein A phrog_805 internal virion protein head and packaging 1 26629 27243
YP_009303672.1 NC_031258_p23 hypothetical protein phrog_18049 unknown function unknown function 1 16166 16393
YP_009303677.1 NC_031258_p28 hypothetical protein phrog_1447 unknown function unknown function 1 18278 18523
YP_009303666.1 NC_031258_p17 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 11164 12876
YP_009303664.1 NC_031258_p15 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 9983 10435
YP_009303690.1 NC_031258_p41 lysin protein phrog_920 holin lysis 1 35518 35724
YP_009303680.1 NC_031258_p31 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 19172 20773
YP_009303671.1 NC_031258_p22 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 14052 16166
YP_009303695.1 NC_031258_p46 hypothetical protein phrog_2193 unknown function unknown function 1 38996 39151
YP_009303665.1 NC_031258_p16 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis 1 10432 10887
YP_009303689.1 NC_031258_p40 tail fibers protein phrog_6256 tail fiber protein tail 1 33565 35505
YP_009303676.1 NC_031258_p27 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 17196 18110
YP_009303688.1 NC_031258_p39 DNA injection channel protein C phrog_342 internal virion protein with endolysin domain head and packaging 1 29546 33493
YP_009303683.1 NC_031258_p34 tail tubular protein A phrog_446 tail protein tail 1 23129 23719