Genomic map of Mycobacterium phage Brocalys (NC_031262)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031262
Definition
Mycobacterium phage Brocalys, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
REFSEQ
Length
54751
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
96
%GC
61.77
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009303871.1 NC_031262_p32 hypothetical protein phrog_1839 unknown function unknown function 1 26290 26382
YP_009303915.1 NC_031262_p76 hypothetical protein phrog_1901 unknown function unknown function 1 47578 47769
YP_009303899.1 NC_031262_p60 hypothetical protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39296 39658
YP_009303866.1 NC_031262_p27 holin phrog_443 holin lysis 1 24320 24553
YP_009303888.1 NC_031262_p49 hypothetical protein phrog_1797 unknown function unknown function 1 34514 35161
YP_009303927.1 NC_031262_p88 hypothetical protein phrog_419 unknown function unknown function 1 50717 50998
YP_009303889.1 NC_031262_p50 hypothetical protein phrog_1849 unknown function unknown function 1 35241 35519
YP_009303910.1 NC_031262_p71 hypothetical protein phrog_1573 DNA methyltransferase other 1 46210 46635
YP_009303879.1 NC_031262_p40 peptidase phrog_87 metallo-protease other -1 29501 29944
YP_009303886.1 NC_031262_p47 hypothetical protein phrog_1840 excisionase integration and excision 1 34063 34332
YP_009303841.1 NC_031262_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 572 2209
YP_009303923.1 NC_031262_p84 hypothetical protein phrog_1467 unknown function unknown function 1 49330 50001
YP_009303911.1 NC_031262_p72 hypothetical protein phrog_9921 unknown function unknown function 1 46635 46727
YP_009303876.1 NC_031262_p37 antitoxin phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover 1 28444 28755
YP_009303905.1 NC_031262_p66 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 44419 45381
YP_009303849.1 NC_031262_p10 head-to-tail connector phrog_813 head-tail adaptor connector 1 7084 7488
YP_009303855.1 NC_031262_p16 minor tail protein phrog_110 minor tail protein tail 1 14792 16501
YP_009303878.1 NC_031262_p39 hypothetical protein phrog_1948 unknown function unknown function -1 29011 29463
YP_009303859.1 NC_031262_p20 minor tail protein phrog_416 minor tail protein tail 1 19901 21058
YP_009303907.1 NC_031262_p68 hypothetical protein phrog_9299 unknown function unknown function 1 45547 45642
YP_009303850.1 NC_031262_p11 major tail subunit phrog_476 major tail protein tail 1 7598 8407
YP_009303874.1 NC_031262_p35 hypothetical protein singleton unknown function unknown function 1 26830 26994
YP_009303913.1 NC_031262_p74 hypothetical protein phrog_10032 unknown function unknown function 1 47208 47372
YP_009303900.1 NC_031262_p61 DNA methylase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 39655 43206
YP_009303845.1 NC_031262_p6 major capsid protein phrog_267 major head protein head and packaging 1 5036 5857
YP_009303870.1 NC_031262_p31 hypothetical protein phrog_1791 unknown function unknown function 1 25986 26297
YP_009303842.1 NC_031262_p3 portal protein phrog_104 portal protein head and packaging 1 2240 3598
YP_009303853.1 NC_031262_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9475 12996
YP_009303897.1 NC_031262_p58 hypothetical protein phrog_5168 unknown function unknown function 1 37861 38325
YP_009303934.1 NC_031262_p95 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 53660 54283
YP_009303881.1 NC_031262_p42 hypothetical protein phrog_19814 unknown function unknown function 1 30791 31153
YP_009303852.1 NC_031262_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8521 9072
YP_009303925.1 NC_031262_p86 hypothetical protein phrog_13974 membrane protein moron, auxiliary metabolic gene and host takeover 1 50287 50589
YP_009303931.1 NC_031262_p92 hypothetical protein phrog_2057 unknown function unknown function 1 51840 52001
YP_009303882.1 NC_031262_p43 antirepressor protein phrog_130 anti-repressor Ant transcription regulation 1 31207 31986
YP_009303891.1 NC_031262_p52 transcription factor WhiB phrog_1333 unknown function unknown function 1 35863 36357
YP_009303873.1 NC_031262_p34 hypothetical protein phrog_2437 unknown function unknown function -1 26631 26831
YP_009303912.1 NC_031262_p73 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 46835 47206
YP_009303865.1 NC_031262_p26 lysin B phrog_102 endolysin lysis 1 23309 24310
YP_009303846.1 NC_031262_p7 head-to-tail connector phrog_2377 head-tail adaptor Ad1 connector 1 5866 6435
YP_009303892.1 NC_031262_p53 hypothetical protein phrog_2096 unknown function unknown function 1 36354 36839
YP_009303851.1 NC_031262_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8521 9457
YP_009303880.1 NC_031262_p41 immunity repressor phrog_20450 transcriptional repressor transcription regulation -1 30128 30691
YP_009303896.1 NC_031262_p57 hypothetical protein phrog_1834 unknown function unknown function 1 37631 37864
YP_009303875.1 NC_031262_p36 integrase phrog_1 integrase integration and excision 1 27204 28322
YP_009303840.1 NC_031262_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
YP_009303884.1 NC_031262_p45 hypothetical protein phrog_4652 unknown function unknown function 1 32741 33487
YP_009303854.1 NC_031262_p15 minor tail protein phrog_106 minor tail protein tail 1 12997 14706
YP_009303862.1 NC_031262_p23 hypothetical protein phrog_1172 unknown function unknown function 1 21674 21850
YP_009303906.1 NC_031262_p67 hypothetical protein phrog_2080 unknown function unknown function 1 45378 45569
YP_009303864.1 NC_031262_p25 lysin A phrog_700 endolysin lysis 1 22152 23312
YP_009303894.1 NC_031262_p55 HTH DNA binding protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 37114 37479
YP_009303856.1 NC_031262_p17 minor tail protein phrog_732 minor tail protein tail 1 16538 17386
YP_009303908.1 NC_031262_p69 hypothetical protein phrog_6275 unknown function unknown function 1 45639 46019
YP_009303930.1 NC_031262_p91 hypothetical protein phrog_1385 unknown function unknown function 1 51605 51847
YP_009303928.1 NC_031262_p89 hypothetical protein phrog_1694 unknown function unknown function 1 50998 51198
YP_009303916.1 NC_031262_p77 hypothetical protein phrog_1091 unknown function unknown function 1 47745 47945
YP_009303887.1 NC_031262_p48 hypothetical protein phrog_1816 unknown function unknown function 1 34329 34517
YP_009303935.1 NC_031262_p96 HNH homing endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 54283 54609
YP_009303918.1 NC_031262_p79 hypothetical protein phrog_5186 unknown function unknown function 1 48079 48252
YP_009303861.1 NC_031262_p22 hypothetical protein phrog_240 head protein head and packaging 1 21294 21674
YP_009303885.1 NC_031262_p46 hypothetical protein phrog_15946 unknown function unknown function 1 33502 33957
YP_009303863.1 NC_031262_p24 hypothetical protein phrog_747 unknown function unknown function 1 21916 22155
YP_009303869.1 NC_031262_p30 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 25168 25989
YP_009303933.1 NC_031262_p94 serine/threonine kinase phrog_1693 unknown function unknown function 1 53457 53663
YP_009303919.1 NC_031262_p80 hypothetical protein phrog_4126 unknown function unknown function 1 48249 48368
YP_009303926.1 NC_031262_p87 hypothetical protein phrog_14508 unknown function unknown function 1 50586 50708
YP_009303893.1 NC_031262_p54 transcription factor WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 36836 37117
YP_009303898.1 NC_031262_p59 AAA ATPase phrog_1366 unknown function unknown function 1 38322 39299
YP_009303858.1 NC_031262_p19 minor tail protein phrog_2235 minor tail protein tail 1 19647 19901
YP_009303872.1 NC_031262_p33 hypothetical protein phrog_3693 unknown function unknown function -1 26485 26649
YP_009303867.1 NC_031262_p28 hypothetical protein phrog_404 minor tail protein tail 1 24550 24924
YP_009303922.1 NC_031262_p83 GIY-YIG homing endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 48806 49333
YP_009303903.1 NC_031262_p64 hypothetical protein phrog_2070 unknown function unknown function 1 43567 43719
YP_009303920.1 NC_031262_p81 hypothetical protein phrog_2278 unknown function unknown function 1 48365 48697
YP_009303868.1 NC_031262_p29 hypothetical protein phrog_2004 unknown function unknown function 1 24921 25181
YP_009303902.1 NC_031262_p63 hypothetical protein phrog_2704 unknown function unknown function 1 43421 43570
YP_009303848.1 NC_031262_p9 head-to-tail connector phrog_1929 head-tail connector protein connector 1 6768 7094
YP_009303877.1 NC_031262_p38 toxin phrog_2268 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 28752 29000
YP_009303901.1 NC_031262_p62 hypothetical protein phrog_7443 unknown function unknown function 1 43203 43424
YP_009303847.1 NC_031262_p8 head-to-tail connector phrog_763 head-tail adaptor connector 1 6432 6761
YP_009303883.1 NC_031262_p44 hypothetical protein phrog_18246 unknown function unknown function 1 31989 32504
YP_009303909.1 NC_031262_p70 hypothetical protein phrog_1943 unknown function unknown function 1 46019 46213
YP_009303895.1 NC_031262_p56 hypothetical protein phrog_2078 unknown function unknown function 1 37476 37631
YP_009303843.1 NC_031262_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3585 4340
YP_009303914.1 NC_031262_p75 hypothetical protein phrog_2939 unknown function unknown function 1 47369 47581
YP_009303921.1 NC_031262_p82 hypothetical protein phrog_6194 unknown function unknown function 1 48694 48771
YP_009303932.1 NC_031262_p93 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 52018 53454
YP_009303860.1 NC_031262_p21 hypothetical protein phrog_6030 unknown function unknown function 1 21055 21294
YP_009303924.1 NC_031262_p85 hypothetical protein phrog_15959 unknown function unknown function 1 50042 50290
YP_009303844.1 NC_031262_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4424 5017
YP_009303904.1 NC_031262_p65 GIY-YIG homing endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 43817 44419
YP_009303890.1 NC_031262_p51 hypothetical protein phrog_658 unknown function unknown function 1 35516 35863
YP_009303917.1 NC_031262_p78 hypothetical protein phrog_1545 unknown function unknown function 1 47927 48082
YP_009303929.1 NC_031262_p90 hypothetical protein phrog_1186 unknown function unknown function 1 51195 51608
YP_009303857.1 NC_031262_p18 minor tail protein phrog_3493 minor tail protein tail 1 17383 19617