functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
NC_031264 |
Definition |
Brucella phage BiPBO1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
46877 |
Host Name |
Brucella inopinata |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
53.32 |
Number of singletons |
32 |
Number of paralogs |
0 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
YP_009304058.1 | NC_031264_p30 | pectate lysase superfamily protein | singleton | unknown function | unknown function | 1 | 18596 | 20461 |
YP_009304090.1 | NC_031264_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34263 | 34397 |
YP_009304070.1 | NC_031264_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26048 | 26263 |
YP_009304041.1 | NC_031264_p13 | major tail protein | phrog_13196 | major tail protein | tail | 1 | 7908 | 8360 |
YP_009304042.1 | NC_031264_p14 | hypothetical protein | phrog_8985 | tail tube protein | tail | 1 | 8360 | 8761 |
YP_009304037.1 | NC_031264_p9 | head-tail-adapter | phrog_25 | head closure Hc1 | connector | 1 | 6436 | 6789 |
YP_009304111.1 | NC_031264_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45651 | 45800 |
YP_009304057.1 | NC_031264_p29 | fibronectin | phrog_5616 | tail fiber protein | tail | 1 | 16758 | 18530 |
YP_009304097.1 | NC_031264_p69 | repressor | singleton | unknown function | unknown function | 1 | 37211 | 37462 |
YP_009304038.1 | NC_031264_p10 | head/tail component | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6794 | 7228 |
YP_009304093.1 | NC_031264_p65 | hypothetical protein | phrog_34620 | unknown function | unknown function | -1 | 35190 | 35504 |
YP_009304052.1 | NC_031264_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15101 | 15358 |
YP_009304073.1 | NC_031264_p45 | hypothetical protein | phrog_25508 | unknown function | unknown function | -1 | 26650 | 26871 |
YP_009304032.1 | NC_031264_p4 | hypothetical protein | phrog_38710 | unknown function | unknown function | 1 | 3297 | 3497 |
YP_009304061.1 | NC_031264_p33 | lysozyme | phrog_7 | endolysin | lysis | 1 | 22107 | 22790 |
YP_009304092.1 | NC_031264_p64 | hypothetical protein | phrog_35233 | unknown function | unknown function | -1 | 34760 | 35200 |
YP_009304107.1 | NC_031264_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42988 | 43206 |
YP_009304049.1 | NC_031264_p21 | hypothetical protein | phrog_16979 | unknown function | unknown function | -1 | 13560 | 13946 |
YP_009304108.1 | NC_031264_p80 | DNA repair exonuclease | phrog_2643 | 5'-3' deoxyribonucleotidase | moron, auxiliary metabolic gene and host takeover | 1 | 43203 | 43706 |
YP_009304099.1 | NC_031264_p71 | hypothetical protein | phrog_34222 | unknown function | unknown function | 1 | 38042 | 38293 |
YP_009304030.1 | NC_031264_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 399 | 2087 |
YP_009304071.1 | NC_031264_p43 | hypothetical protein | phrog_37244 | unknown function | unknown function | -1 | 26260 | 26487 |
YP_009304082.1 | NC_031264_p54 | transcriptional repressor | phrog_30599 | transcriptional regulator | transcription regulation | -1 | 31749 | 32030 |
YP_009304079.1 | NC_031264_p51 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 29066 | 29491 |
YP_009304078.1 | NC_031264_p50 | hypothetical protein | phrog_2201 | unknown function | unknown function | -1 | 28743 | 29069 |
YP_009304089.1 | NC_031264_p61 | DNA-binding protein | singleton | unknown function | unknown function | -1 | 33782 | 34156 |
YP_009304088.1 | NC_031264_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33428 | 33769 |
YP_009304113.1 | NC_031264_p85 | hypothetical protein | phrog_37208 | unknown function | unknown function | 1 | 46066 | 46263 |
YP_009304080.1 | NC_031264_p52 | recombinational DNA repair protein RecT | singleton | unknown function | unknown function | -1 | 29493 | 30830 |
YP_009304104.1 | NC_031264_p76 | hypothetical protein | phrog_26995 | unknown function | unknown function | 1 | 39329 | 39865 |
YP_009304067.1 | NC_031264_p39 | hypothetical protein | phrog_23243 | unknown function | unknown function | -1 | 25296 | 25562 |
YP_009304101.1 | NC_031264_p73 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38633 | 38776 |
YP_009304100.1 | NC_031264_p72 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38259 | 38537 |
YP_009304064.1 | NC_031264_p36 | hypothetical protein | phrog_37258 | unknown function | unknown function | -1 | 23483 | 23677 |
YP_009304068.1 | NC_031264_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25646 | 25879 |
YP_009304029.1 | NC_031264_p1 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 1 | 402 |
YP_009304077.1 | NC_031264_p49 | hypothetical protein | phrog_17425 | unknown function | unknown function | -1 | 28096 | 28746 |
YP_009304054.1 | NC_031264_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15604 | 15903 |
YP_009304110.1 | NC_031264_p82 | hypothetical protein | phrog_37864 | unknown function | unknown function | 1 | 44140 | 44922 |
YP_009304043.1 | NC_031264_p15 | hypothetical protein | phrog_18467 | unknown function | unknown function | 1 | 8782 | 8904 |
YP_009304046.1 | NC_031264_p18 | transcription regulator | phrog_2048 | tail protein | tail | 1 | 12169 | 12834 |
YP_009304098.1 | NC_031264_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37459 | 37929 |
YP_009304106.1 | NC_031264_p78 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 41417 | 42901 |
YP_009304045.1 | NC_031264_p17 | hypothetical protein | phrog_12948 | tail protein | tail | 1 | 11489 | 12169 |
YP_009304062.1 | NC_031264_p34 | hypothetical protein | phrog_12535 | unknown function | unknown function | 1 | 22787 | 23062 |
YP_009304050.1 | NC_031264_p22 | hypothetical protein | phrog_18767 | unknown function | unknown function | 1 | 14049 | 14243 |
YP_009304040.1 | NC_031264_p12 | hypothetical protein | phrog_20380 | unknown function | unknown function | 1 | 7623 | 7829 |
YP_009304112.1 | NC_031264_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45797 | 46066 |
YP_009304114.1 | NC_031264_p86 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46518 | 46685 |
YP_009304060.1 | NC_031264_p32 | acyltransferase | phrog_3333 | O-acetyltransferase | other | 1 | 20853 | 22001 |
YP_009304035.1 | NC_031264_p7 | hypothetical protein | phrog_20183 | unknown function | unknown function | 1 | 5690 | 5851 |
YP_009304091.1 | NC_031264_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34575 | 34733 |
YP_009304055.1 | NC_031264_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15995 | 16324 |
YP_009304065.1 | NC_031264_p37 | integrase | phrog_1 | integrase | integration and excision | -1 | 23947 | 24990 |
YP_009304048.1 | NC_031264_p20 | addiction module antitoxin/toxin | phrog_3445 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 13160 | 13450 |
YP_009304074.1 | NC_031264_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26868 | 27011 |
YP_009304095.1 | NC_031264_p67 | type IV secretion protein | phrog_1848 | unknown function | unknown function | -1 | 35779 | 36384 |
YP_009304083.1 | NC_031264_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32030 | 32293 |
YP_009304059.1 | NC_031264_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20475 | 20705 |
YP_009304076.1 | NC_031264_p48 | RNA-binding protein | phrog_625 | unknown function | unknown function | -1 | 27779 | 28099 |
YP_009304033.1 | NC_031264_p5 | Clp protease | phrog_1684 | head maturation protease | head and packaging | 1 | 3475 | 4320 |
YP_009304039.1 | NC_031264_p11 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 7225 | 7626 |
YP_009304109.1 | NC_031264_p81 | hypothetical protein | phrog_22699 | unknown function | unknown function | 1 | 43703 | 44143 |
YP_009304094.1 | NC_031264_p66 | hypothetical protein | phrog_37345 | unknown function | unknown function | -1 | 35525 | 35758 |
YP_009304081.1 | NC_031264_p53 | 5'-3' specific dsDNA exonuclease RecE | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | -1 | 30833 | 31756 |
YP_009304047.1 | NC_031264_p19 | addiction module antitoxin/toxin | phrog_4268 | transcriptional repressor | transcription regulation | -1 | 12862 | 13158 |
YP_009304063.1 | NC_031264_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23174 | 23479 |
YP_009304103.1 | NC_031264_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39207 | 39332 |
YP_009304069.1 | NC_031264_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25885 | 26055 |
YP_009304102.1 | NC_031264_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38855 | 39253 |
YP_009304096.1 | NC_031264_p68 | prophage repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 36393 | 37196 |
YP_009304036.1 | NC_031264_p8 | DNA packaging/head-tail-connector | phrog_442 | head-tail adaptor | connector | 1 | 5855 | 6436 |
YP_009304044.1 | NC_031264_p16 | tail length tape measure protein | phrog_17300 | tail length tape measure protein | tail | 1 | 8904 | 11489 |
YP_009304031.1 | NC_031264_p3 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2087 | 3319 |
YP_009304085.1 | NC_031264_p57 | hypothetical protein | phrog_26990 | unknown function | unknown function | -1 | 32468 | 33010 |
YP_009304087.1 | NC_031264_p59 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33207 | 33428 |
YP_009304105.1 | NC_031264_p77 | chromosomal replication initiator protein DnaA | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 40713 | 41402 |
YP_009304075.1 | NC_031264_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27094 | 27789 |
YP_009304053.1 | NC_031264_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15358 | 15594 |
YP_009304066.1 | NC_031264_p38 | excisionase | singleton | unknown function | unknown function | -1 | 24941 | 25216 |
YP_009304084.1 | NC_031264_p56 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32295 | 32471 |
YP_009304072.1 | NC_031264_p44 | hypothetical protein | phrog_292 | unknown function | unknown function | -1 | 26477 | 26653 |
YP_009304034.1 | NC_031264_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4334 | 5626 |
YP_009304086.1 | NC_031264_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33015 | 33137 |
YP_009304051.1 | NC_031264_p23 | antirepressor KilA | phrog_129 | transcriptional regulator | transcription regulation | 1 | 14358 | 15101 |
YP_009304056.1 | NC_031264_p28 | hypothetical protein | phrog_2134 | unknown function | unknown function | 1 | 16375 | 16767 |