| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031265 |
Definition |
Gordonia phage Guacamole, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
49894 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
78 |
%GC |
67.18 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009304159.1 | NC_031265_p45 | hypothetical protein | phrog_9909 | unknown function | unknown function | 1 | 34051 | 34353 |
| YP_009304161.1 | NC_031265_p47 | hypothetical protein | phrog_11014 | unknown function | unknown function | 1 | 34637 | 35008 |
| YP_009304169.1 | NC_031265_p55 | exonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 37476 | 38405 |
| YP_009304130.1 | NC_031265_p16 | tail assembly chaperone | phrog_5010 | tail assembly chaperone | tail | 1 | 9424 | 9834 |
| YP_009304143.1 | NC_031265_p29 | hypothetical protein | phrog_8055 | unknown function | unknown function | 1 | 24949 | 25278 |
| YP_009304134.1 | NC_031265_p20 | lysin A | phrog_1512 | endolysin | lysis | 1 | 18317 | 19024 |
| YP_009304145.1 | NC_031265_p31 | acyltransferase | singleton | unknown function | unknown function | -1 | 27570 | 28694 |
| YP_009304116.1 | NC_031265_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 361 | 1929 |
| YP_009304129.1 | NC_031265_p15 | tail assembly chaperone | phrog_8183 | tail assembly chaperone | tail | 1 | 9424 | 10208 |
| YP_009304121.1 | NC_031265_p7 | head-to-tail connector protein | phrog_2322 | head-tail connector protein | connector | 1 | 6146 | 6574 |
| YP_009304170.1 | NC_031265_p56 | ssDNA binding protein | phrog_2780 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 38402 | 39493 |
| YP_009304189.1 | NC_031265_p75 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 47418 | 48194 |
| YP_009304179.1 | NC_031265_p65 | hypothetical protein | phrog_12575 | unknown function | unknown function | 1 | 42497 | 42886 |
| YP_009304177.1 | NC_031265_p63 | nucleotidyltransferase | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 41500 | 42285 |
| YP_009304124.1 | NC_031265_p10 | hypothetical protein | phrog_16006 | unknown function | unknown function | 1 | 7334 | 7594 |
| YP_009304142.1 | NC_031265_p28 | minor tail protein | phrog_737 | minor tail protein | tail | 1 | 23390 | 24949 |
| YP_009304141.1 | NC_031265_p27 | minor tail protein | phrog_4120 | minor tail protein | tail | 1 | 22323 | 23390 |
| YP_009304137.1 | NC_031265_p23 | membrane protein | phrog_11800 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20463 | 20717 |
| YP_009304144.1 | NC_031265_p30 | minor tail protein | phrog_17388 | minor tail protein | tail | 1 | 25271 | 27562 |
| YP_009304126.1 | NC_031265_p12 | head-to-tail connector protein | phrog_5837 | head closure Hc1 | connector | 1 | 7874 | 8161 |
| YP_009304120.1 | NC_031265_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5213 | 6142 |
| YP_009304186.1 | NC_031265_p72 | hypothetical protein | phrog_11256 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 45594 | 46649 |
| YP_009304171.1 | NC_031265_p57 | hypothetical protein | phrog_8105 | unknown function | unknown function | 1 | 39490 | 39792 |
| YP_009304184.1 | NC_031265_p70 | hypothetical protein | phrog_2857 | tail fiber protein | tail | 1 | 44849 | 45145 |
| YP_009304140.1 | NC_031265_p26 | hypothetical protein | phrog_9406 | unknown function | unknown function | 1 | 21956 | 22330 |
| YP_009304123.1 | NC_031265_p9 | head-to-tail connector protein | phrog_501 | head closure Hc1 | connector | 1 | 6963 | 7325 |
| YP_009304164.1 | NC_031265_p50 | hypothetical protein | phrog_9981 | unknown function | unknown function | 1 | 35699 | 35887 |
| YP_009304149.1 | NC_031265_p35 | hypothetical protein | phrog_5392 | unknown function | unknown function | -1 | 30090 | 30431 |
| YP_009304156.1 | NC_031265_p42 | hypothetical protein | phrog_8218 | unknown function | unknown function | 1 | 33394 | 33564 |
| YP_009304133.1 | NC_031265_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16654 | 18300 |
| YP_009304147.1 | NC_031265_p33 | hypothetical protein | phrog_5663 | unknown function | unknown function | 1 | 28974 | 29471 |
| YP_009304181.1 | NC_031265_p67 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43197 | 43619 |
| YP_009304118.1 | NC_031265_p4 | capsid maturation protease | phrog_3894 | head maturation protease | head and packaging | 1 | 3317 | 4732 |
| YP_009304188.1 | NC_031265_p74 | hypothetical protein | phrog_12987 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 47233 | 47421 |
| YP_009304138.1 | NC_031265_p24 | membrane protein | phrog_10261 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20704 | 21162 |
| YP_009304178.1 | NC_031265_p64 | hypothetical protein | phrog_11360 | unknown function | unknown function | 1 | 42282 | 42500 |
| YP_009304166.1 | NC_031265_p52 | hypothetical protein | phrog_6877 | unknown function | unknown function | 1 | 36195 | 36539 |
| YP_009304122.1 | NC_031265_p8 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6571 | 6963 |
| YP_009304191.1 | NC_031265_p77 | hypothetical protein | phrog_8604 | unknown function | unknown function | 1 | 48781 | 49305 |
| YP_009304117.1 | NC_031265_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 1941 | 3317 |
| YP_009304192.1 | NC_031265_p78 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49464 | 49826 |
| YP_009304115.1 | NC_031265_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 57 | 398 |
| YP_009304139.1 | NC_031265_p25 | lysin B | phrog_102 | endolysin | lysis | 1 | 21156 | 21959 |
| YP_009304176.1 | NC_031265_p62 | hypothetical protein | phrog_10682 | unknown function | unknown function | 1 | 41315 | 41503 |
| YP_009304135.1 | NC_031265_p21 | lysin A | phrog_3084 | endolysin | lysis | 1 | 19024 | 19935 |
| YP_009304150.1 | NC_031265_p36 | HTH DNA-binding domain protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 30491 | 30778 |
| YP_009304185.1 | NC_031265_p71 | hypothetical protein | phrog_20666 | unknown function | unknown function | 1 | 45142 | 45597 |
| YP_009304174.1 | NC_031265_p60 | hypothetical protein | phrog_8336 | unknown function | unknown function | 1 | 40635 | 41132 |
| YP_009304158.1 | NC_031265_p44 | hypothetical protein | phrog_9588 | unknown function | unknown function | 1 | 33740 | 34054 |
| YP_009304190.1 | NC_031265_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48191 | 48655 |
| YP_009304153.1 | NC_031265_p39 | hypothetical protein | phrog_34171 | unknown function | unknown function | -1 | 32244 | 32504 |
| YP_009304183.1 | NC_031265_p69 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 43764 | 44852 |
| YP_009304187.1 | NC_031265_p73 | RuvC-like resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 46646 | 47236 |
| YP_009304119.1 | NC_031265_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4734 | 5186 |
| YP_009304175.1 | NC_031265_p61 | hypothetical protein | phrog_10784 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 41136 | 41318 |
| YP_009304180.1 | NC_031265_p66 | hypothetical protein | phrog_13233 | unknown function | unknown function | 1 | 42886 | 43200 |
| YP_009304157.1 | NC_031265_p43 | hypothetical protein | phrog_6554 | unknown function | unknown function | 1 | 33561 | 33743 |
| YP_009304163.1 | NC_031265_p49 | hypothetical protein | phrog_5984 | unknown function | unknown function | 1 | 35349 | 35702 |
| YP_009304136.1 | NC_031265_p22 | membrane protein | phrog_443 | holin | lysis | 1 | 19938 | 20399 |
| YP_009304131.1 | NC_031265_p17 | tape measure protein | phrog_4197 | tail length tape measure protein | tail | 1 | 10278 | 15800 |
| YP_009304151.1 | NC_031265_p37 | hypothetical protein | phrog_22923 | unknown function | unknown function | 1 | 30824 | 31255 |
| YP_009304128.1 | NC_031265_p14 | major tail protein | phrog_117 | major tail protein | tail | 1 | 8683 | 9321 |
| YP_009304148.1 | NC_031265_p34 | hypothetical protein | phrog_6153 | unknown function | unknown function | -1 | 29477 | 29704 |
| YP_009304146.1 | NC_031265_p32 | hypothetical protein | phrog_22254 | unknown function | unknown function | -1 | 28715 | 28858 |
| YP_009304173.1 | NC_031265_p59 | hypothetical protein | phrog_12075 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 40442 | 40651 |
| YP_009304127.1 | NC_031265_p13 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 8158 | 8577 |
| YP_009304165.1 | NC_031265_p51 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 35884 | 36198 |
| YP_009304155.1 | NC_031265_p41 | excise | phrog_4583 | transcriptional repressor | transcription regulation | 1 | 33011 | 33295 |
| YP_009304182.1 | NC_031265_p68 | hypothetical protein | phrog_10260 | unknown function | unknown function | 1 | 43616 | 43774 |
| YP_009304172.1 | NC_031265_p58 | hypothetical protein | phrog_26600 | unknown function | unknown function | 1 | 39789 | 40445 |
| YP_009304167.1 | NC_031265_p53 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 36539 | 36892 |
| YP_009304168.1 | NC_031265_p54 | exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 36889 | 37476 |
| YP_009304125.1 | NC_031265_p11 | head-to-tail connector protein | phrog_9658 | head-tail connector protein | connector | 1 | 7591 | 7881 |
| YP_009304162.1 | NC_031265_p48 | helix-turn-helix DNA binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35005 | 35367 |
| YP_009304154.1 | NC_031265_p40 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 32501 | 32920 |
| YP_009304132.1 | NC_031265_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15791 | 16657 |
| YP_009304160.1 | NC_031265_p46 | hypothetical protein | phrog_8812 | unknown function | unknown function | 1 | 34350 | 34640 |
| YP_009304152.1 | NC_031265_p38 | integrase | phrog_1 | integrase | integration and excision | -1 | 31252 | 32142 |