| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031266 |
Definition |
Mycobacterium phage Phrann, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Redivirus. |
DB of origin |
REFSEQ |
Length |
44872 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
67 |
%GC |
66.27 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009304246.1 | NC_031266_p54 | hypothetical protein | phrog_11218 | unknown function | unknown function | 1 | 37095 | 37388 |
| YP_009304230.1 | NC_031266_p38 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 29820 | 30191 |
| YP_009304212.1 | NC_031266_p20 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17560 | 20412 |
| YP_009304202.1 | NC_031266_p10 | hypothetical protein | phrog_8006 | neck protein | connector | 1 | 6836 | 7033 |
| YP_009304241.1 | NC_031266_p49 | ssDNA binding protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 34643 | 35707 |
| YP_009304217.1 | NC_031266_p25 | lysin A | phrog_6707 | endolysin | lysis | 1 | 22267 | 23202 |
| YP_009304237.1 | NC_031266_p45 | hypothetical protein | phrog_16008 | unknown function | unknown function | 1 | 32268 | 32639 |
| YP_009304220.1 | NC_031266_p28 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 24634 | 24999 |
| YP_009304240.1 | NC_031266_p48 | endonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 33627 | 34637 |
| YP_009304254.1 | NC_031266_p62 | hypothetical protein | phrog_6821 | unknown function | unknown function | 1 | 42287 | 42403 |
| YP_009304219.1 | NC_031266_p27 | holin | phrog_443 | holin | lysis | 1 | 24392 | 24637 |
| YP_009304227.1 | NC_031266_p35 | hypothetical protein | phrog_16062 | unknown function | unknown function | -1 | 28062 | 28271 |
| YP_009304234.1 | NC_031266_p42 | hypothetical protein | phrog_5081 | unknown function | unknown function | 1 | 31069 | 31563 |
| YP_009304231.1 | NC_031266_p39 | excise | phrog_4583 | transcriptional repressor | transcription regulation | 1 | 30325 | 30558 |
| YP_009304239.1 | NC_031266_p47 | hypothetical protein | phrog_11506 | unknown function | unknown function | 1 | 33283 | 33630 |
| YP_009304221.1 | NC_031266_p29 | hypothetical protein | phrog_4773 | unknown function | unknown function | 1 | 25126 | 26004 |
| YP_009304196.1 | NC_031266_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2263 | 3552 |
| YP_009304194.1 | NC_031266_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 509 | 2044 |
| YP_009304200.1 | NC_031266_p8 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 5997 | 6482 |
| YP_009304250.1 | NC_031266_p58 | hypothetical protein | phrog_7969 | unknown function | unknown function | 1 | 40465 | 40653 |
| YP_009304223.1 | NC_031266_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26339 | 26566 |
| YP_009304222.1 | NC_031266_p30 | hypothetical protein | phrog_22117 | unknown function | unknown function | 1 | 26012 | 26227 |
| YP_009304205.1 | NC_031266_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7923 | 8981 |
| YP_009304238.1 | NC_031266_p46 | WhiB family transcription factor | phrog_8273 | unknown function | unknown function | 1 | 32636 | 33286 |
| YP_009304228.1 | NC_031266_p36 | hypothetical protein | phrog_1712 | unknown function | unknown function | -1 | 28461 | 28799 |
| YP_009304235.1 | NC_031266_p43 | hypothetical protein | phrog_9601 | unknown function | unknown function | 1 | 31622 | 31876 |
| YP_009304199.1 | NC_031266_p7 | hypothetical protein | phrog_7530 | unknown function | unknown function | 1 | 5753 | 6004 |
| YP_009304256.1 | NC_031266_p64 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 42729 | 43394 |
| YP_009304203.1 | NC_031266_p11 | head-to-tail connector | phrog_2325 | minor tail protein | tail | 1 | 7020 | 7391 |
| YP_009304216.1 | NC_031266_p24 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 22023 | 22196 |
| YP_009304213.1 | NC_031266_p21 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 20409 | 21479 |
| YP_009304218.1 | NC_031266_p26 | lysin B | phrog_102 | endolysin | lysis | 1 | 23199 | 24365 |
| YP_009304257.1 | NC_031266_p65 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 43606 | 44157 |
| YP_009304247.1 | NC_031266_p55 | hypothetical protein | phrog_5505 | unknown function | unknown function | 1 | 37388 | 37603 |
| YP_009304229.1 | NC_031266_p37 | integrase | phrog_1 | integrase | integration and excision | -1 | 28845 | 29816 |
| YP_009304258.1 | NC_031266_p66 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 44154 | 44399 |
| YP_009304214.1 | NC_031266_p22 | hypothetical protein | phrog_25391 | unknown function | unknown function | 1 | 21476 | 21652 |
| YP_009304211.1 | NC_031266_p19 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16718 | 17560 |
| YP_009304249.1 | NC_031266_p57 | DNA helicase/methylase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 37839 | 40448 |
| YP_009304215.1 | NC_031266_p23 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 21664 | 22026 |
| YP_009304226.1 | NC_031266_p34 | HicA family toxin | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 27798 | 28016 |
| YP_009304245.1 | NC_031266_p53 | hypothetical protein | phrog_6650 | unknown function | unknown function | 1 | 36697 | 37098 |
| YP_009304197.1 | NC_031266_p5 | capsid maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 3555 | 4361 |
| YP_009304193.1 | NC_031266_p1 | hypothetical protein | phrog_6975 | unknown function | unknown function | 1 | 63 | 512 |
| YP_009304243.1 | NC_031266_p51 | resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 36063 | 36455 |
| YP_009304208.1 | NC_031266_p16 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10169 | 13270 |
| YP_009304204.1 | NC_031266_p12 | head-to-tail connector | phrog_813 | head-tail adaptor | connector | 1 | 7388 | 7807 |
| YP_009304201.1 | NC_031266_p9 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 6479 | 6823 |
| YP_009304259.1 | NC_031266_p67 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44377 | 44685 |
| YP_009304225.1 | NC_031266_p33 | HicB family antitoxin | phrog_8245 | HicB-like antitoxin | moron, auxiliary metabolic gene and host takeover | -1 | 27355 | 27801 |
| YP_009304242.1 | NC_031266_p50 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 35704 | 36066 |
| YP_009304232.1 | NC_031266_p40 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 30555 | 30902 |
| YP_009304236.1 | NC_031266_p44 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 31873 | 32271 |
| YP_009304195.1 | NC_031266_p3 | hypothetical protein | phrog_6750 | unknown function | unknown function | 1 | 2037 | 2246 |
| YP_009304253.1 | NC_031266_p61 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 41688 | 42290 |
| YP_009304251.1 | NC_031266_p59 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 40673 | 40810 |
| YP_009304252.1 | NC_031266_p60 | HTH DNA-binding protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 40807 | 41691 |
| YP_009304209.1 | NC_031266_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13272 | 14993 |
| YP_009304255.1 | NC_031266_p63 | hypothetical protein | phrog_14001 | unknown function | unknown function | 1 | 42400 | 42732 |
| YP_009304233.1 | NC_031266_p41 | hypothetical protein | phrog_26034 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 30899 | 31072 |
| YP_009304207.1 | NC_031266_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9081 | 9611 |
| YP_009304206.1 | NC_031266_p14 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 9081 | 9987 |
| YP_009304248.1 | NC_031266_p56 | hypothetical protein | phrog_21063 | unknown function | unknown function | 1 | 37600 | 37842 |
| YP_009304210.1 | NC_031266_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14993 | 16702 |
| YP_009304198.1 | NC_031266_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4389 | 5684 |
| YP_009304224.1 | NC_031266_p32 | hypothetical protein | phrog_31635 | unknown function | unknown function | -1 | 26572 | 27258 |
| YP_009304244.1 | NC_031266_p52 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 36452 | 36700 |