Genomic map of Mycobacterium phage Phrann (NC_031266)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031266
Definition
Mycobacterium phage Phrann, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Redivirus.
DB of origin
REFSEQ
Length
44872
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
67
%GC
66.27
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009304246.1 NC_031266_p54 hypothetical protein phrog_11218 unknown function unknown function 1 37095 37388
YP_009304230.1 NC_031266_p38 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 29820 30191
YP_009304212.1 NC_031266_p20 minor tail protein phrog_346 minor tail protein tail 1 17560 20412
YP_009304202.1 NC_031266_p10 hypothetical protein phrog_8006 neck protein connector 1 6836 7033
YP_009304241.1 NC_031266_p49 ssDNA binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34643 35707
YP_009304217.1 NC_031266_p25 lysin A phrog_6707 endolysin lysis 1 22267 23202
YP_009304237.1 NC_031266_p45 hypothetical protein phrog_16008 unknown function unknown function 1 32268 32639
YP_009304220.1 NC_031266_p28 hypothetical protein phrog_404 minor tail protein tail 1 24634 24999
YP_009304240.1 NC_031266_p48 endonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 33627 34637
YP_009304254.1 NC_031266_p62 hypothetical protein phrog_6821 unknown function unknown function 1 42287 42403
YP_009304219.1 NC_031266_p27 holin phrog_443 holin lysis 1 24392 24637
YP_009304227.1 NC_031266_p35 hypothetical protein phrog_16062 unknown function unknown function -1 28062 28271
YP_009304234.1 NC_031266_p42 hypothetical protein phrog_5081 unknown function unknown function 1 31069 31563
YP_009304231.1 NC_031266_p39 excise phrog_4583 transcriptional repressor transcription regulation 1 30325 30558
YP_009304239.1 NC_031266_p47 hypothetical protein phrog_11506 unknown function unknown function 1 33283 33630
YP_009304221.1 NC_031266_p29 hypothetical protein phrog_4773 unknown function unknown function 1 25126 26004
YP_009304196.1 NC_031266_p4 portal protein phrog_12 portal protein head and packaging 1 2263 3552
YP_009304194.1 NC_031266_p2 terminase phrog_9 terminase large subunit head and packaging 1 509 2044
YP_009304200.1 NC_031266_p8 hypothetical protein phrog_442 head-tail adaptor connector 1 5997 6482
YP_009304250.1 NC_031266_p58 hypothetical protein phrog_7969 unknown function unknown function 1 40465 40653
YP_009304223.1 NC_031266_p31 hypothetical protein singleton unknown function unknown function 1 26339 26566
YP_009304222.1 NC_031266_p30 hypothetical protein phrog_22117 unknown function unknown function 1 26012 26227
YP_009304205.1 NC_031266_p13 major tail protein phrog_476 major tail protein tail 1 7923 8981
YP_009304238.1 NC_031266_p46 WhiB family transcription factor phrog_8273 unknown function unknown function 1 32636 33286
YP_009304228.1 NC_031266_p36 hypothetical protein phrog_1712 unknown function unknown function -1 28461 28799
YP_009304235.1 NC_031266_p43 hypothetical protein phrog_9601 unknown function unknown function 1 31622 31876
YP_009304199.1 NC_031266_p7 hypothetical protein phrog_7530 unknown function unknown function 1 5753 6004
YP_009304256.1 NC_031266_p64 hypothetical protein phrog_908 unknown function unknown function 1 42729 43394
YP_009304203.1 NC_031266_p11 head-to-tail connector phrog_2325 minor tail protein tail 1 7020 7391
YP_009304216.1 NC_031266_p24 hypothetical protein phrog_1172 unknown function unknown function 1 22023 22196
YP_009304213.1 NC_031266_p21 hypothetical protein phrog_416 minor tail protein tail 1 20409 21479
YP_009304218.1 NC_031266_p26 lysin B phrog_102 endolysin lysis 1 23199 24365
YP_009304257.1 NC_031266_p65 hypothetical protein phrog_1186 unknown function unknown function 1 43606 44157
YP_009304247.1 NC_031266_p55 hypothetical protein phrog_5505 unknown function unknown function 1 37388 37603
YP_009304229.1 NC_031266_p37 integrase phrog_1 integrase integration and excision -1 28845 29816
YP_009304258.1 NC_031266_p66 hypothetical protein phrog_1385 unknown function unknown function 1 44154 44399
YP_009304214.1 NC_031266_p22 hypothetical protein phrog_25391 unknown function unknown function 1 21476 21652
YP_009304211.1 NC_031266_p19 minor tail protein phrog_732 minor tail protein tail 1 16718 17560
YP_009304249.1 NC_031266_p57 DNA helicase/methylase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 37839 40448
YP_009304215.1 NC_031266_p23 hypothetical protein phrog_240 head protein head and packaging 1 21664 22026
YP_009304226.1 NC_031266_p34 HicA family toxin phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 27798 28016
YP_009304245.1 NC_031266_p53 hypothetical protein phrog_6650 unknown function unknown function 1 36697 37098
YP_009304197.1 NC_031266_p5 capsid maturation protease phrog_80 head maturation protease head and packaging 1 3555 4361
YP_009304193.1 NC_031266_p1 hypothetical protein phrog_6975 unknown function unknown function 1 63 512
YP_009304243.1 NC_031266_p51 resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 36063 36455
YP_009304208.1 NC_031266_p16 tape measure protein phrog_2337 tail length tape measure protein tail 1 10169 13270
YP_009304204.1 NC_031266_p12 head-to-tail connector phrog_813 head-tail adaptor connector 1 7388 7807
YP_009304201.1 NC_031266_p9 hypothetical protein phrog_1531 head closure connector 1 6479 6823
YP_009304259.1 NC_031266_p67 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44377 44685
YP_009304225.1 NC_031266_p33 HicB family antitoxin phrog_8245 HicB-like antitoxin moron, auxiliary metabolic gene and host takeover -1 27355 27801
YP_009304242.1 NC_031266_p50 hypothetical protein phrog_4387 unknown function unknown function 1 35704 36066
YP_009304232.1 NC_031266_p40 hypothetical protein phrog_3507 unknown function unknown function 1 30555 30902
YP_009304236.1 NC_031266_p44 hypothetical protein phrog_549 unknown function unknown function 1 31873 32271
YP_009304195.1 NC_031266_p3 hypothetical protein phrog_6750 unknown function unknown function 1 2037 2246
YP_009304253.1 NC_031266_p61 hypothetical protein phrog_3599 unknown function unknown function 1 41688 42290
YP_009304251.1 NC_031266_p59 hypothetical protein phrog_2451 unknown function unknown function 1 40673 40810
YP_009304252.1 NC_031266_p60 HTH DNA-binding protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 40807 41691
YP_009304209.1 NC_031266_p17 minor tail protein phrog_106 minor tail protein tail 1 13272 14993
YP_009304255.1 NC_031266_p63 hypothetical protein phrog_14001 unknown function unknown function 1 42400 42732
YP_009304233.1 NC_031266_p41 hypothetical protein phrog_26034 membrane protein moron, auxiliary metabolic gene and host takeover 1 30899 31072
YP_009304207.1 NC_031266_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9081 9611
YP_009304206.1 NC_031266_p14 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 9081 9987
YP_009304248.1 NC_031266_p56 hypothetical protein phrog_21063 unknown function unknown function 1 37600 37842
YP_009304210.1 NC_031266_p18 minor tail protein phrog_110 minor tail protein tail 1 14993 16702
YP_009304198.1 NC_031266_p6 major capsid protein phrog_10 major head protein head and packaging 1 4389 5684
YP_009304224.1 NC_031266_p32 hypothetical protein phrog_31635 unknown function unknown function -1 26572 27258
YP_009304244.1 NC_031266_p52 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 36452 36700