| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031267 |
Definition |
Gordonia phage Lucky10, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Luckytenvirus; Gordonia virus Lucky10. |
DB of origin |
REFSEQ |
Length |
42979 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
70 |
%GC |
65.37 |
Number of singletons |
13 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009304302.1 | NC_031267_p43 | hypothetical protein | phrog_7723 | unknown function | unknown function | 1 | 32224 | 32448 |
| YP_009304329.1 | NC_031267_p70 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42595 | 42897 |
| YP_009304281.1 | NC_031267_p22 | holin | phrog_8672 | unknown function | unknown function | 1 | 18828 | 19217 |
| YP_009304307.1 | NC_031267_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33227 | 33514 |
| YP_009304317.1 | NC_031267_p58 | hypothetical protein | phrog_33312 | unknown function | unknown function | 1 | 36978 | 37679 |
| YP_009304315.1 | NC_031267_p56 | hypothetical protein | phrog_13683 | unknown function | unknown function | 1 | 36216 | 36647 |
| YP_009304310.1 | NC_031267_p51 | hypothetical protein | phrog_37464 | unknown function | unknown function | 1 | 34880 | 35185 |
| YP_009304261.1 | NC_031267_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 313 | 1758 |
| YP_009304276.1 | NC_031267_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 14280 | 15188 |
| YP_009304269.1 | NC_031267_p10 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6338 | 6595 |
| YP_009304296.1 | NC_031267_p37 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 29520 | 29939 |
| YP_009304265.1 | NC_031267_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4488 | 5390 |
| YP_009304268.1 | NC_031267_p9 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 6000 | 6341 |
| YP_009304323.1 | NC_031267_p64 | hypothetical protein | phrog_37378 | unknown function | unknown function | 1 | 40485 | 40817 |
| YP_009304312.1 | NC_031267_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35442 | 35654 |
| YP_009304318.1 | NC_031267_p59 | hypothetical protein | phrog_7793 | unknown function | unknown function | 1 | 37676 | 37801 |
| YP_009304311.1 | NC_031267_p52 | hypothetical protein | phrog_13001 | unknown function | unknown function | 1 | 35182 | 35445 |
| YP_009304320.1 | NC_031267_p61 | hypothetical protein | phrog_16479 | unknown function | unknown function | 1 | 39228 | 39497 |
| YP_009304292.1 | NC_031267_p33 | hypothetical protein | phrog_33388 | unknown function | unknown function | 1 | 27622 | 27900 |
| YP_009304322.1 | NC_031267_p63 | HTH DNA-binding protein | phrog_1408 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 39691 | 40488 |
| YP_009304287.1 | NC_031267_p28 | hypothetical protein | phrog_29359 | unknown function | unknown function | -1 | 24797 | 24961 |
| YP_009304263.1 | NC_031267_p4 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 3151 | 3789 |
| YP_009304295.1 | NC_031267_p36 | HTH DNA-binding protein | phrog_5316 | unknown function | unknown function | -1 | 29311 | 29523 |
| YP_009304285.1 | NC_031267_p26 | hypothetical protein | phrog_25867 | tail protein | tail | 1 | 22139 | 23872 |
| YP_009304283.1 | NC_031267_p24 | lysin B | phrog_102 | endolysin | lysis | 1 | 19603 | 20307 |
| YP_009304293.1 | NC_031267_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27900 | 28235 |
| YP_009304278.1 | NC_031267_p19 | hypothetical protein | phrog_17401 | unknown function | unknown function | 1 | 16897 | 17247 |
| YP_009304277.1 | NC_031267_p18 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 15185 | 16897 |
| YP_009304304.1 | NC_031267_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32714 | 32869 |
| YP_009304314.1 | NC_031267_p55 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 35945 | 36226 |
| YP_009304313.1 | NC_031267_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35658 | 35945 |
| YP_009304279.1 | NC_031267_p20 | lysin A | phrog_3084 | endolysin | lysis | 1 | 17297 | 18589 |
| YP_009304272.1 | NC_031267_p13 | tail assembly chaperone | singleton | unknown function | unknown function | 1 | 7794 | 8246 |
| YP_009304291.1 | NC_031267_p32 | hypothetical protein | phrog_31563 | unknown function | unknown function | -1 | 26843 | 27343 |
| YP_009304324.1 | NC_031267_p65 | resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 40814 | 41182 |
| YP_009304306.1 | NC_031267_p47 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 33042 | 33230 |
| YP_009304286.1 | NC_031267_p27 | alpha-L-arabinofuranosidase | phrog_10356 | virion structural protein | head and packaging | 1 | 23886 | 24815 |
| YP_009304262.1 | NC_031267_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1755 | 3197 |
| YP_009304273.1 | NC_031267_p14 | tail assembly chaperone | singleton | unknown function | unknown function | 1 | 8336 | 8644 |
| YP_009304271.1 | NC_031267_p12 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 7042 | 7632 |
| YP_009304280.1 | NC_031267_p21 | membrane protein | phrog_443 | holin | lysis | 1 | 18592 | 18828 |
| YP_009304267.1 | NC_031267_p8 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5542 | 6003 |
| YP_009304282.1 | NC_031267_p23 | hypothetical protein | phrog_11860 | unknown function | unknown function | 1 | 19214 | 19603 |
| YP_009304275.1 | NC_031267_p16 | tape measure protein | phrog_10780 | tail length tape measure protein | tail | 1 | 8884 | 14280 |
| YP_009304303.1 | NC_031267_p44 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 32445 | 32717 |
| YP_009304266.1 | NC_031267_p7 | hypothetical protein | phrog_748 | head-tail connector protein | connector | 1 | 5390 | 5542 |
| YP_009304299.1 | NC_031267_p40 | GIY-YIG nuclease | singleton | unknown function | unknown function | 1 | 31073 | 31567 |
| YP_009304308.1 | NC_031267_p49 | exonuclease | phrog_149 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 33511 | 34326 |
| YP_009304325.1 | NC_031267_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41182 | 41328 |
| YP_009304298.1 | NC_031267_p39 | DNA-binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 30804 | 31070 |
| YP_009304289.1 | NC_031267_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25264 | 26280 |
| YP_009304270.1 | NC_031267_p11 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 6599 | 6982 |
| YP_009304260.1 | NC_031267_p1 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 45 | 347 |
| YP_009304288.1 | NC_031267_p29 | hypothetical protein | phrog_22254 | unknown function | unknown function | -1 | 24988 | 25173 |
| YP_009304309.1 | NC_031267_p50 | hypothetical protein | phrog_11517 | unknown function | unknown function | 1 | 34323 | 34883 |
| YP_009304305.1 | NC_031267_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32866 | 33045 |
| YP_009304319.1 | NC_031267_p60 | DNA methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 37798 | 39231 |
| YP_009304327.1 | NC_031267_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42097 | 42402 |
| YP_009304321.1 | NC_031267_p62 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39494 | 39694 |
| YP_009304294.1 | NC_031267_p35 | integrase | phrog_1 | integrase | integration and excision | 1 | 28235 | 29314 |
| YP_009304326.1 | NC_031267_p67 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 41325 | 42068 |
| YP_009304290.1 | NC_031267_p31 | hypothetical protein | phrog_6153 | unknown function | unknown function | -1 | 26320 | 26592 |
| YP_009304301.1 | NC_031267_p42 | hypothetical protein | phrog_21939 | unknown function | unknown function | 1 | 31862 | 32227 |
| YP_009304328.1 | NC_031267_p69 | hypothetical protein | phrog_31833 | unknown function | unknown function | 1 | 42410 | 42595 |
| YP_009304264.1 | NC_031267_p5 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 3847 | 4470 |
| YP_009304297.1 | NC_031267_p38 | immunity repressor | phrog_6288 | unknown function | unknown function | -1 | 29993 | 30583 |
| YP_009304316.1 | NC_031267_p57 | hypothetical protein | phrog_24727 | unknown function | unknown function | 1 | 36644 | 36985 |
| YP_009304300.1 | NC_031267_p41 | hypothetical protein | phrog_12920 | unknown function | unknown function | 1 | 31564 | 31848 |
| YP_009304284.1 | NC_031267_p25 | hypothetical protein | phrog_2689 | minor tail protein | tail | 1 | 20304 | 22139 |
| YP_009304274.1 | NC_031267_p15 | hypothetical protein | singleton | unknown function | unknown function | -1 | 8641 | 8877 |