| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031269 |
Definition |
Gordonia phage Yeezy, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nymbaxtervirinae; Baxtervirus. |
DB of origin |
REFSEQ |
Length |
51884 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
66.69 |
Number of singletons |
9 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009304379.1 | NC_031269_p49 | hypothetical protein | phrog_204 | unknown function | unknown function | 1 | 35894 | 36232 |
| YP_009304363.1 | NC_031269_p33 | hypothetical protein | phrog_18428 | unknown function | unknown function | -1 | 28076 | 28420 |
| YP_009304399.1 | NC_031269_p69 | hypothetical protein | phrog_5429 | DNA repair protein | DNA, RNA and nucleotide metabolism | 1 | 44798 | 45409 |
| YP_009304408.1 | NC_031269_p78 | hypothetical protein | phrog_21675 | unknown function | unknown function | 1 | 48209 | 48937 |
| YP_009304359.1 | NC_031269_p29 | minor tail protein | phrog_8780 | minor tail protein | tail | 1 | 24023 | 26269 |
| YP_009304406.1 | NC_031269_p76 | hypothetical protein | phrog_25240 | unknown function | unknown function | 1 | 47836 | 48126 |
| YP_009304389.1 | NC_031269_p59 | hypothetical protein | phrog_3848 | unknown function | unknown function | 1 | 40768 | 41082 |
| YP_009304341.1 | NC_031269_p10 | head-to-tail connector protein | phrog_556 | minor head protein | head and packaging | 1 | 7054 | 7383 |
| YP_009304358.1 | NC_031269_p28 | hypothetical protein | phrog_13955 | unknown function | unknown function | 1 | 23647 | 24030 |
| YP_009304413.1 | NC_031269_p83 | hypothetical protein | phrog_15735 | unknown function | unknown function | 1 | 50665 | 50799 |
| YP_009304348.1 | NC_031269_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16295 | 17122 |
| YP_009304377.1 | NC_031269_p47 | hypothetical protein | phrog_9213 | unknown function | unknown function | 1 | 35213 | 35434 |
| YP_009304347.1 | NC_031269_p17 | tape measure protein | phrog_7025 | tail length tape measure protein | tail | 1 | 9966 | 16295 |
| YP_009304370.1 | NC_031269_p40 | hypothetical protein | phrog_12920 | unknown function | unknown function | 1 | 32253 | 32549 |
| YP_009304415.1 | NC_031269_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51123 | 51428 |
| YP_009304381.1 | NC_031269_p51 | hypothetical protein | phrog_6877 | unknown function | unknown function | 1 | 37111 | 37371 |
| YP_009304391.1 | NC_031269_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41341 | 41898 |
| YP_009304350.1 | NC_031269_p20 | lysin A | phrog_1512 | endolysin | lysis | 1 | 18779 | 19516 |
| YP_009304355.1 | NC_031269_p25 | membrane protein | phrog_3798 | unknown function | unknown function | 1 | 21154 | 21528 |
| YP_009304340.1 | NC_031269_p9 | head-to-tail connector protein | phrog_3881 | head-tail connector protein | connector | 1 | 6677 | 7042 |
| YP_009304332.1 | NC_031269_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 14 | 346 |
| YP_009304361.1 | NC_031269_p31 | hypothetical protein | phrog_5663 | unknown function | unknown function | 1 | 27085 | 27582 |
| YP_009304398.1 | NC_031269_p68 | hypothetical protein | phrog_17296 | unknown function | unknown function | 1 | 44520 | 44798 |
| YP_009304351.1 | NC_031269_p21 | lysin A | phrog_3084 | endolysin | lysis | 1 | 19516 | 20427 |
| YP_009304335.1 | NC_031269_p4 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3213 | 4478 |
| YP_009304362.1 | NC_031269_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27678 | 27911 |
| YP_009304373.1 | NC_031269_p43 | DNA-binding protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 33390 | 34265 |
| YP_009304368.1 | NC_031269_p38 | immunity repressor | phrog_6288 | unknown function | unknown function | -1 | 30884 | 31783 |
| YP_009304369.1 | NC_031269_p39 | HTH DNA-binding protein | phrog_6463 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31945 | 32256 |
| YP_009304405.1 | NC_031269_p75 | resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47471 | 47836 |
| YP_009304387.1 | NC_031269_p57 | hypothetical protein | phrog_19094 | unknown function | unknown function | 1 | 40212 | 40589 |
| YP_009304416.1 | NC_031269_p86 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 51428 | 51784 |
| YP_009304386.1 | NC_031269_p56 | ssDNA binding protein | phrog_4171 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 39122 | 40219 |
| YP_009304414.1 | NC_031269_p84 | hypothetical protein | phrog_10381 | unknown function | unknown function | 1 | 50799 | 51107 |
| YP_009304409.1 | NC_031269_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48934 | 49179 |
| YP_009304360.1 | NC_031269_p30 | hypothetical protein | phrog_7114 | minor tail protein | tail | 1 | 26274 | 26855 |
| YP_009304343.1 | NC_031269_p12 | major tail protein | phrog_3884 | major tail protein | tail | 1 | 7823 | 8335 |
| YP_009304396.1 | NC_031269_p66 | hypothetical protein | phrog_24727 | unknown function | unknown function | 1 | 43439 | 43933 |
| YP_009304354.1 | NC_031269_p24 | hypothetical protein | phrog_17624 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20975 | 21157 |
| YP_009304372.1 | NC_031269_p42 | hypothetical protein | phrog_36857 | unknown function | unknown function | 1 | 32881 | 33300 |
| YP_009304333.1 | NC_031269_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 318 | 1901 |
| YP_009304403.1 | NC_031269_p73 | hypothetical protein | phrog_4296 | unknown function | unknown function | 1 | 46717 | 47211 |
| YP_009304374.1 | NC_031269_p44 | hypothetical protein | phrog_21001 | unknown function | unknown function | 1 | 34262 | 34681 |
| YP_009304407.1 | NC_031269_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48126 | 48212 |
| YP_009304393.1 | NC_031269_p63 | hypothetical protein | phrog_13233 | unknown function | unknown function | 1 | 42722 | 42922 |
| YP_009304366.1 | NC_031269_p36 | helix-turn-helix DNA binding protein | phrog_5316 | unknown function | unknown function | -1 | 30182 | 30409 |
| YP_009304400.1 | NC_031269_p70 | hypothetical protein | phrog_10621 | unknown function | unknown function | 1 | 45402 | 45611 |
| YP_009304371.1 | NC_031269_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32549 | 32884 |
| YP_009304353.1 | NC_031269_p23 | membrane protein | phrog_4565 | unknown function | unknown function | 1 | 20724 | 20975 |
| YP_009304404.1 | NC_031269_p74 | hypothetical protein | phrog_14741 | unknown function | unknown function | 1 | 47208 | 47474 |
| YP_009304375.1 | NC_031269_p45 | hypothetical protein | phrog_7723 | unknown function | unknown function | 1 | 34678 | 34905 |
| YP_009304339.1 | NC_031269_p8 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6274 | 6645 |
| YP_009304342.1 | NC_031269_p11 | head-to-tail connector protein | phrog_2595 | head-tail connector protein | connector | 1 | 7380 | 7820 |
| YP_009304385.1 | NC_031269_p55 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 38295 | 39125 |
| YP_009304380.1 | NC_031269_p50 | hypothetical protein | phrog_210 | unknown function | unknown function | 1 | 36236 | 37114 |
| YP_009304337.1 | NC_031269_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 4895 | 5824 |
| YP_009304346.1 | NC_031269_p16 | hypothetical protein | phrog_2320 | unknown function | unknown function | -1 | 9519 | 9836 |
| YP_009304338.1 | NC_031269_p7 | head-to-tail connector protein | phrog_2322 | head-tail connector protein | connector | 1 | 5821 | 6270 |
| YP_009304397.1 | NC_031269_p67 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 43930 | 44385 |
| YP_009304334.1 | NC_031269_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 1906 | 3216 |
| YP_009304394.1 | NC_031269_p64 | hypothetical protein | phrog_19263 | unknown function | unknown function | 1 | 42919 | 43191 |
| YP_009304382.1 | NC_031269_p52 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 37368 | 37610 |
| YP_009304384.1 | NC_031269_p54 | hypothetical protein | phrog_2857 | tail fiber protein | tail | 1 | 37969 | 38298 |
| YP_009304365.1 | NC_031269_p35 | integrase | phrog_1 | integrase | integration and excision | -1 | 28906 | 30168 |
| YP_009304378.1 | NC_031269_p48 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 35466 | 35855 |
| YP_009304345.1 | NC_031269_p15 | tail assembly chaperone | phrog_3860 | tail assembly chaperone | tail | 1 | 8643 | 9290 |
| YP_009304402.1 | NC_031269_p72 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 45740 | 46720 |
| YP_009304352.1 | NC_031269_p22 | membrane protein | phrog_3428 | holin | lysis | 1 | 20430 | 20720 |
| YP_009304411.1 | NC_031269_p81 | hypothetical protein | phrog_9543 | unknown function | unknown function | 1 | 49954 | 50286 |
| YP_009304364.1 | NC_031269_p34 | hypothetical protein | phrog_17063 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 28426 | 28662 |
| YP_009304344.1 | NC_031269_p14 | tail assembly chaperone | phrog_3860 | tail assembly chaperone | tail | 1 | 8643 | 9547 |
| YP_009304349.1 | NC_031269_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17119 | 18717 |
| YP_009304336.1 | NC_031269_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4481 | 4891 |
| YP_009304357.1 | NC_031269_p27 | minor tail protein | phrog_2689 | minor tail protein | tail | 1 | 22145 | 23650 |
| YP_009304401.1 | NC_031269_p71 | DNA-binding protein | phrog_25163 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 45608 | 45733 |
| YP_009304390.1 | NC_031269_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41079 | 41348 |
| YP_009304388.1 | NC_031269_p58 | hypothetical protein | phrog_10709 | unknown function | unknown function | 1 | 40586 | 40771 |
| YP_009337998.1 | NC_031269_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8394 | 8522 |
| YP_009304395.1 | NC_031269_p65 | hypothetical protein | phrog_16050 | unknown function | unknown function | 1 | 43272 | 43439 |
| YP_009304410.1 | NC_031269_p80 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 49176 | 49838 |
| YP_009304367.1 | NC_031269_p37 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 30406 | 30822 |
| YP_009304376.1 | NC_031269_p46 | hypothetical protein | phrog_32619 | unknown function | unknown function | 1 | 34902 | 35216 |
| YP_009304412.1 | NC_031269_p82 | hypothetical protein | phrog_17450 | unknown function | unknown function | 1 | 50273 | 50665 |
| YP_009304392.1 | NC_031269_p62 | hypothetical protein | phrog_32119 | unknown function | unknown function | 1 | 41895 | 42725 |
| YP_009304383.1 | NC_031269_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37607 | 37972 |
| YP_009304356.1 | NC_031269_p26 | lysin B | phrog_102 | endolysin | lysis | 1 | 21525 | 22145 |