Genomic map of Mycobacterium phage ArcherNM (NC_031277)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031277
Definition
Mycobacterium phage ArcherNM, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
52561
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
64.17
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009304561.1 NC_031277_p2 VIP2-like toxin phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1062 2000
YP_009304587.1 NC_031277_p28 tape measure protein phrog_305 tail length tape measure protein tail 1 18421 20922
YP_009304610.1 NC_031277_p51 hypothetical protein phrog_221 metallo-phosphoesterase other -1 36974 37744
YP_009304648.1 NC_031277_p89 hypothetical protein phrog_1392 unknown function unknown function -1 50183 50893
YP_009304570.1 NC_031277_p11 lysin A phrog_317 endolysin lysis 1 6513 7808
YP_009304593.1 NC_031277_p34 minor tail protein phrog_737 minor tail protein tail 1 25064 26842
YP_009304611.1 NC_031277_p52 hypothetical protein phrog_474 phosphofructokinase other -1 37741 38061
YP_009304575.1 NC_031277_p16 capsid maturation protease phrog_193 head maturation protease head and packaging 1 12471 13355
YP_009304623.1 NC_031277_p64 hypothetical protein phrog_520 unknown function unknown function -1 42302 42544
YP_009304596.1 NC_031277_p37 hypothetical protein singleton unknown function unknown function -1 28712 28852
YP_009304637.1 NC_031277_p78 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46946 47236
YP_009304592.1 NC_031277_p33 minor tail protein phrog_726 unknown function unknown function 1 24619 25053
YP_009304620.1 NC_031277_p61 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40952 41338
YP_009304564.1 NC_031277_p5 hypothetical protein phrog_226 minor tail protein tail 1 2626 3096
YP_009304576.1 NC_031277_p17 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 13370 13930
YP_009304640.1 NC_031277_p81 hypothetical protein phrog_3718 unknown function unknown function -1 48147 48470
YP_009304580.1 NC_031277_p21 head to tail connector protein phrog_830 head-tail connector protein connector 1 15551 15745
YP_009304595.1 NC_031277_p36 dsDNA partitioning protein phrog_2639 Arc-like repressor transcription regulation 1 28290 28559
YP_009304622.1 NC_031277_p63 hypothetical protein phrog_2731 unknown function unknown function -1 42189 42302
YP_009304641.1 NC_031277_p82 hypothetical protein phrog_10286 unknown function unknown function -1 48520 48789
YP_009304615.1 NC_031277_p56 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39009 39476
YP_009304601.1 NC_031277_p42 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29982 31769
YP_009304621.1 NC_031277_p62 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41373 42179
YP_009304583.1 NC_031277_p24 head to tail connector protein phrog_123 tail terminator connector 1 16455 16880
YP_009304643.1 NC_031277_p84 hypothetical protein phrog_586 unknown function unknown function -1 49075 49422
YP_009304598.1 NC_031277_p39 hypothetical protein phrog_2099 unknown function unknown function -1 29213 29506
YP_009304567.1 NC_031277_p8 hypothetical protein phrog_356 minor tail protein tail 1 5248 5922
YP_009304573.1 NC_031277_p14 terminase phrog_9 terminase large subunit head and packaging 1 9227 11014
YP_009304608.1 NC_031277_p49 transcription factor phrog_354 sigma-K factor transcription regulation -1 36085 36822
YP_009304613.1 NC_031277_p54 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38135 38767
YP_009304649.1 NC_031277_p90 hypothetical protein phrog_1445 unknown function unknown function -1 50920 51024
YP_009304617.1 NC_031277_p58 esterase/lipase phrog_789 esterase/lipase other -1 39570 40415
YP_009304645.1 NC_031277_p86 hypothetical protein phrog_519 unknown function unknown function -1 49514 49681
YP_009304568.1 NC_031277_p9 hypothetical protein phrog_2269 unknown function unknown function 1 5931 6146
YP_009304603.1 NC_031277_p44 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32347 33078
YP_009304578.1 NC_031277_p19 head to tail connector protein phrog_748 head-tail connector protein connector 1 14988 15173
YP_009304600.1 NC_031277_p41 hypothetical protein phrog_896 unknown function unknown function -1 29733 29951
YP_009304584.1 NC_031277_p25 major tail subunit phrog_117 major tail protein tail 1 16899 17492
YP_009304597.1 NC_031277_p38 hypothetical protein phrog_383 unknown function unknown function -1 28852 29226
YP_009304612.1 NC_031277_p53 hypothetical protein phrog_2264 unknown function unknown function -1 38058 38135
YP_009304630.1 NC_031277_p71 hypothetical protein phrog_4294 unknown function unknown function -1 45516 45677
YP_009304589.1 NC_031277_p30 minor tail protein phrog_110 minor tail protein tail 1 21966 23738
YP_009304646.1 NC_031277_p87 hypothetical protein phrog_1946 unknown function unknown function -1 49678 49878
YP_009304626.1 NC_031277_p67 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43034 43936
YP_009304631.1 NC_031277_p72 hypothetical protein phrog_4569 unknown function unknown function -1 45677 45931
YP_009304574.1 NC_031277_p15 portal protein phrog_104 portal protein head and packaging 1 11011 12474
YP_009304633.1 NC_031277_p74 hypothetical protein phrog_1178 unknown function unknown function -1 46071 46349
YP_009304642.1 NC_031277_p83 hypothetical protein phrog_2223 unknown function unknown function -1 48786 49049
YP_009304588.1 NC_031277_p29 minor tail protein phrog_106 minor tail protein tail 1 20956 21969
YP_009304618.1 NC_031277_p59 hypothetical protein phrog_8981 unknown function unknown function -1 40403 40573
YP_009304628.1 NC_031277_p69 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44412 45032
YP_009304585.1 NC_031277_p26 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 17602 18431
YP_009304582.1 NC_031277_p23 head to tail connector protein phrog_321 tail completion or Neck1 protein connector 1 16110 16445
YP_009304569.1 NC_031277_p10 hypothetical protein phrog_1087 unknown function unknown function 1 6376 6513
YP_009304634.1 NC_031277_p75 hypothetical protein phrog_23377 unknown function unknown function -1 46349 46588
YP_009304638.1 NC_031277_p79 hypothetical protein phrog_421 unknown function unknown function -1 47249 48007
YP_009304563.1 NC_031277_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2293 2589
YP_009304647.1 NC_031277_p88 hypothetical protein phrog_3207 unknown function unknown function -1 49887 50174
YP_009304566.1 NC_031277_p7 structural protein phrog_819 tail protein tail 1 4221 5246
YP_009304605.1 NC_031277_p46 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33682 35706
YP_009304635.1 NC_031277_p76 hypothetical protein phrog_3351 unknown function unknown function -1 46585 46812
YP_009304571.1 NC_031277_p12 holin phrog_526 holin lysis 1 7805 8230
YP_009304602.1 NC_031277_p43 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31778 32185
YP_009304586.1 NC_031277_p27 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 17602 18006
YP_009304579.1 NC_031277_p20 head to tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 15177 15554
YP_009304590.1 NC_031277_p31 minor tail protein phrog_352 minor tail protein tail 1 23752 24204
YP_009304609.1 NC_031277_p50 hypothetical protein phrog_2436 unknown function unknown function -1 36819 36971
YP_009304599.1 NC_031277_p40 hypothetical protein phrog_3283 unknown function unknown function -1 29503 29733
YP_009304594.1 NC_031277_p35 dsDNA partitioning protein phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 27722 28297
YP_009304606.1 NC_031277_p47 hypothetical protein phrog_2046 unknown function unknown function -1 35703 35909
YP_009304639.1 NC_031277_p80 hypothetical protein phrog_855 unknown function unknown function -1 48004 48138
YP_009304619.1 NC_031277_p60 hypothetical protein phrog_397 unknown function unknown function -1 40570 40803
YP_009304636.1 NC_031277_p77 hypothetical protein phrog_1477 unknown function unknown function -1 46764 46958
YP_009304577.1 NC_031277_p18 major capsid protein phrog_10 major head protein head and packaging 1 13960 14916
YP_009304629.1 NC_031277_p70 hypothetical protein phrog_1173 unknown function unknown function -1 45208 45375
YP_009304625.1 NC_031277_p66 hypothetical protein phrog_642 unknown function unknown function -1 42764 42985
YP_009304560.1 NC_031277_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 391 1155
YP_009304604.1 NC_031277_p45 DNA binding protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33152 33685
YP_009304632.1 NC_031277_p73 hypothetical protein phrog_8490 unknown function unknown function -1 45931 46074
YP_009304581.1 NC_031277_p22 head to tail connector protein phrog_320 head closure Hc1 connector 1 15742 16110
YP_009304627.1 NC_031277_p68 hypothetical protein phrog_1562 unknown function unknown function -1 43933 44346
YP_009304562.1 NC_031277_p3 hypothetical protein phrog_4491 unknown function unknown function 1 1997 2296
YP_009304572.1 NC_031277_p13 lysin B phrog_102 endolysin lysis 1 8227 9204
YP_009304650.1 NC_031277_p91 hypothetical protein phrog_1676 unknown function unknown function -1 51034 51333
YP_009304565.1 NC_031277_p6 hypothetical protein phrog_1260 minor tail protein tail 1 3190 4152
YP_009304616.1 NC_031277_p57 hypothetical protein phrog_2187 unknown function unknown function -1 39427 39573
YP_009304624.1 NC_031277_p65 hypothetical protein phrog_666 unknown function unknown function -1 42573 42767
YP_009304644.1 NC_031277_p85 hypothetical protein phrog_31948 unknown function unknown function -1 49419 49517
YP_009304614.1 NC_031277_p55 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38595 38984
YP_009304591.1 NC_031277_p32 minor tail protein phrog_1298 minor tail protein tail 1 24201 24629
YP_009304607.1 NC_031277_p48 hypothetical protein phrog_499 unknown function unknown function -1 35906 36088