Genomic map of Mycobacterium phage Panchino (NC_031281)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031281
Definition
Mycobacterium phage Panchino, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Redivirus.
DB of origin
REFSEQ
Length
43516
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
66
%GC
65.94
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009304930.1 NC_031281_p22 hypothetical protein phrog_6374 unknown function unknown function 1 21232 21384
YP_009304936.1 NC_031281_p28 type 1 restriction enzyme singleton unknown function unknown function -1 24257 26740
YP_009304958.1 NC_031281_p50 hypothetical protein phrog_3821 unknown function unknown function 1 36267 36539
YP_009304940.1 NC_031281_p32 integrase phrog_1 integrase integration and excision -1 28163 29134
YP_009304960.1 NC_031281_p52 hypothetical protein phrog_5505 unknown function unknown function 1 36826 37047
YP_009304923.1 NC_031281_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9057 9587
YP_009304933.1 NC_031281_p25 lysin A phrog_1519 endolysin lysis 1 21997 23352
YP_009304954.1 NC_031281_p46 hypothetical protein phrog_4387 unknown function unknown function 1 35062 35424
YP_009304956.1 NC_031281_p48 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 35810 36058
YP_009304927.1 NC_031281_p19 minor tail protein phrog_732 minor tail protein tail 1 16691 17533
YP_009304942.1 NC_031281_p34 excise phrog_4583 transcriptional repressor transcription regulation 1 29645 29878
YP_009304973.1 NC_031281_p65 hypothetical protein phrog_1385 unknown function unknown function 1 42798 43043
YP_009304934.1 NC_031281_p26 holin phrog_526 holin lysis 1 23349 23753
YP_009304968.1 NC_031281_p60 hypothetical protein phrog_14001 unknown function unknown function 1 40763 41095
YP_009304965.1 NC_031281_p57 HTH DNA-binding protein phrog_1408 replication initiation protein DNA, RNA and nucleotide metabolism 1 39053 39931
YP_009304910.1 NC_031281_p2 terminase phrog_9 terminase large subunit head and packaging 1 509 2044
YP_009304957.1 NC_031281_p49 hypothetical protein phrog_10863 unknown function unknown function 1 36055 36270
YP_009304914.1 NC_031281_p6 major capsid protein phrog_10 major head protein head and packaging 1 4389 5684
YP_009304911.1 NC_031281_p3 hypothetical protein phrog_6750 unknown function unknown function 1 2037 2246
YP_009304938.1 NC_031281_p30 hypothetical protein phrog_16337 membrane protein moron, auxiliary metabolic gene and host takeover -1 27215 27745
YP_009304928.1 NC_031281_p20 minor tail protein phrog_746 minor tail protein tail 1 17533 20178
YP_009304972.1 NC_031281_p64 hypothetical protein phrog_1186 unknown function unknown function 1 42391 42801
YP_009304917.1 NC_031281_p9 hypothetical protein phrog_1531 head closure connector 1 6455 6799
YP_009304959.1 NC_031281_p51 hypothetical protein phrog_11218 unknown function unknown function 1 36536 36829
YP_009304920.1 NC_031281_p12 hypothetical protein phrog_813 head-tail adaptor connector 1 7364 7783
YP_009304922.1 NC_031281_p14 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 9057 9963
YP_009304919.1 NC_031281_p11 head-to-tail connector phrog_2325 minor tail protein tail 1 6996 7367
YP_009304924.1 NC_031281_p16 tape measure protein phrog_2337 tail length tape measure protein tail 1 10145 13243
YP_009304950.1 NC_031281_p42 WhiB family transcription factor phrog_1333 unknown function unknown function 1 32264 32647
YP_009304932.1 NC_031281_p24 hypothetical protein phrog_1172 unknown function unknown function 1 21760 21927
YP_009304974.1 NC_031281_p66 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43021 43329
YP_009304943.1 NC_031281_p35 hypothetical protein phrog_3507 unknown function unknown function 1 29875 30222
YP_009304955.1 NC_031281_p47 resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35421 35813
YP_009304969.1 NC_031281_p61 hypothetical protein phrog_908 unknown function unknown function 1 41092 41757
YP_009304935.1 NC_031281_p27 minor tail protein phrog_404 minor tail protein tail 1 23750 24223
YP_009304966.1 NC_031281_p58 hypothetical protein phrog_3599 unknown function unknown function 1 39928 40521
YP_009304916.1 NC_031281_p8 head-to-tail connector phrog_442 head-tail adaptor connector 1 5973 6458
YP_009304964.1 NC_031281_p56 hypothetical protein phrog_2451 unknown function unknown function 1 38919 39056
YP_009304953.1 NC_031281_p45 ssDNA binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34001 35065
YP_009304918.1 NC_031281_p10 hypothetical protein phrog_8006 neck protein connector 1 6812 7009
YP_009304961.1 NC_031281_p53 hypothetical protein phrog_2045 unknown function unknown function 1 37157 38233
YP_009304921.1 NC_031281_p13 major tail protein phrog_476 major tail protein tail 1 7899 8957
YP_009304971.1 NC_031281_p63 hypothetical protein phrog_1694 unknown function unknown function 1 42170 42394
YP_009304948.1 NC_031281_p40 hypothetical protein phrog_16008 unknown function unknown function 1 31588 31998
YP_009304912.1 NC_031281_p4 portal protein phrog_12 portal protein head and packaging 1 2263 3552
YP_009304945.1 NC_031281_p37 hypothetical protein phrog_5081 unknown function unknown function 1 30389 30883
YP_009304946.1 NC_031281_p38 hypothetical protein phrog_9601 unknown function unknown function 1 30942 31196
YP_009304915.1 NC_031281_p7 hypothetical protein phrog_7530 unknown function unknown function 1 5753 5980
YP_009304926.1 NC_031281_p18 minor tail protein phrog_110 minor tail protein tail 1 14966 16675
YP_009304947.1 NC_031281_p39 hypothetical protein phrog_549 unknown function unknown function 1 31193 31591
YP_009304937.1 NC_031281_p29 hypothetical protein phrog_16514 unknown function unknown function -1 26995 27165
YP_009304962.1 NC_031281_p54 hypothetical protein phrog_464 unknown function unknown function 1 38226 38558
YP_009304963.1 NC_031281_p55 methylase phrog_11096 unknown function unknown function 1 38551 38922
YP_009304951.1 NC_031281_p43 hypothetical protein phrog_11506 unknown function unknown function 1 32644 32988
YP_009304944.1 NC_031281_p36 hypothetical protein phrog_26034 membrane protein moron, auxiliary metabolic gene and host takeover 1 30219 30392
YP_009304939.1 NC_031281_p31 hypothetical protein phrog_1712 unknown function unknown function -1 27788 28129
YP_009304913.1 NC_031281_p5 capsid maturation protease phrog_80 head maturation protease head and packaging 1 3555 4361
YP_009304949.1 NC_031281_p41 hypothetical protein phrog_8273 unknown function unknown function 1 31995 32267
YP_009304909.1 NC_031281_p1 hypothetical protein phrog_6975 unknown function unknown function 1 63 512
YP_009304931.1 NC_031281_p23 hypothetical protein phrog_240 head protein head and packaging 1 21401 21763
YP_009304967.1 NC_031281_p59 hypothetical protein phrog_6821 unknown function unknown function 1 40518 40766
YP_009304970.1 NC_031281_p62 hypothetical protein phrog_27168 unknown function unknown function 1 41901 42167
YP_009304952.1 NC_031281_p44 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 32985 33995
YP_009304925.1 NC_031281_p17 minor tail protein phrog_106 minor tail protein tail 1 13245 14966
YP_009304929.1 NC_031281_p21 minor tail protein phrog_416 minor tail protein tail 1 20180 21217
YP_009304941.1 NC_031281_p33 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 29140 29511