Genomic map of Streptococcus phage phiARI0131-1 (NC_031901)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031901
Definition
Streptococcus phage phiARI0131-1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
42927
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
39.59
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009320684.1 NC_031901_p13 hypothetical protein phrog_183 tail chaperone protein tail -1 18706 19086
YP_009320717.1 NC_031901_p46 hypothetical protein phrog_633 transcriptional regulator transcription regulation -1 39769 40110
YP_009320682.1 NC_031901_p11 hypothetical protein phrog_1194 unknown function unknown function -1 14378 14728
YP_009320714.1 NC_031901_p43 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism -1 38327 38809
YP_009320690.1 NC_031901_p19 hypothetical protein phrog_544 major head protein head and packaging -1 21359 22204
YP_009320704.1 NC_031901_p33 hypothetical protein phrog_834 unknown function unknown function -1 31052 31366
YP_009320710.1 NC_031901_p39 hypothetical protein phrog_2486 unknown function unknown function -1 35994 36308
YP_009320676.1 NC_031901_p5 hypothetical protein phrog_2158 abortive infection resistance protein moron, auxiliary metabolic gene and host takeover 1 3013 3963
YP_009320696.1 NC_031901_p25 minor head protein phrog_2841 minor head protein head and packaging -1 24144 25727
YP_009320678.1 NC_031901_p7 amidase_2 domain protein phrog_1110 endolysin lysis -1 5675 6631
YP_009320675.1 NC_031901_p4 HTH_3 domain protein phrog_4 transcriptional repressor transcription regulation 1 2073 2864
YP_009320683.1 NC_031901_p12 hypothetical protein phrog_1535 tail length tape measure protein tail -1 14737 18330
YP_009320679.1 NC_031901_p8 holin_LLH domain protein phrog_608 holin lysis -1 6631 6966
YP_009320688.1 NC_031901_p17 hypothetical protein phrog_933 unknown function unknown function -1 20994 21182
YP_009320715.1 NC_031901_p44 HNH_3 domain protein phrog_1891 HNH endonuclease DNA, RNA and nucleotide metabolism -1 38802 39524
YP_009320722.1 NC_031901_p51 hypothetical protein phrog_7728 unknown function unknown function 1 41552 41743
YP_009320701.1 NC_031901_p30 hypothetical protein singleton unknown function unknown function -1 30213 30320
YP_009320711.1 NC_031901_p40 DEAD domain protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 36327 37520
YP_009320712.1 NC_031901_p41 hypothetical protein phrog_1981 unknown function unknown function -1 37483 37968
YP_009320673.1 NC_031901_p2 hypothetical protein phrog_1305 DNA binding protein DNA, RNA and nucleotide metabolism 1 1140 1829
YP_009320686.1 NC_031901_p15 hypothetical protein phrog_78 tail terminator connector -1 19507 19875
YP_009320692.1 NC_031901_p21 hypothetical protein phrog_918 unknown function unknown function -1 22982 23233
YP_009320716.1 NC_031901_p45 hypothetical protein phrog_2044 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism -1 39538 39768
YP_009320721.1 NC_031901_p50 hypothetical protein phrog_1534 unknown function unknown function -1 41123 41293
YP_009320697.1 NC_031901_p26 hypothetical protein phrog_64 portal protein head and packaging -1 25690 27159
YP_009320705.1 NC_031901_p34 hypothetical protein phrog_1489 unknown function unknown function -1 31855 32007
YP_009320687.1 NC_031901_p16 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 19872 20387
YP_009320718.1 NC_031901_p47 hypothetical protein phrog_5054 unknown function unknown function -1 40122 40313
YP_009320674.1 NC_031901_p3 hypothetical protein phrog_4488 unknown function unknown function -1 1780 1911
YP_009320724.1 NC_031901_p53 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 42374 42589
YP_009320695.1 NC_031901_p24 hypothetical protein phrog_3514 unknown function unknown function -1 23933 24142
YP_009320680.1 NC_031901_p9 hypothetical protein phrog_1137 unknown function unknown function -1 7632 7835
YP_009320685.1 NC_031901_p14 hypothetical protein phrog_158 major tail protein tail -1 19091 19504
YP_009320708.1 NC_031901_p37 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 34641 35144
YP_009320694.1 NC_031901_p23 metal dependent phosphohydrolase phrog_990 metal-dependent phosphohydrolase other -1 23523 23936
YP_009320699.1 NC_031901_p28 terminase_2 domain protein phrog_51 terminase small subunit head and packaging -1 28447 28926
YP_009320709.1 NC_031901_p38 AAA_24 domain protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 35164 35991
YP_009320719.1 NC_031901_p48 hypothetical protein phrog_2648 unknown function unknown function -1 40310 40504
YP_009320693.1 NC_031901_p22 hypothetical protein phrog_419 unknown function unknown function -1 23235 23480
YP_009320713.1 NC_031901_p42 hypothetical protein phrog_1341 unknown function unknown function -1 37968 38327
YP_009320691.1 NC_031901_p20 DUF4355 domain protein phrog_172 head scaffolding protein head and packaging -1 22210 22779
YP_009320689.1 NC_031901_p18 hypothetical protein phrog_2250 unknown function unknown function -1 21172 21354
YP_009320706.1 NC_031901_p35 VirE domain protein phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism -1 32301 33650
YP_009320677.1 NC_031901_p6 integrase domain protein phrog_1 integrase integration and excision 1 4242 5369
YP_009320703.1 NC_031901_p32 DUF1642 domain protein phrog_121 unknown function unknown function -1 30544 31050
YP_009320720.1 NC_031901_p49 hypothetical protein phrog_2273 unknown function unknown function -1 40501 40773
YP_009320707.1 NC_031901_p36 Prim-Pol domain protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 33647 34468
YP_009320681.1 NC_031901_p10 peptidase_S74 domain protein phrog_1210 PblB-type receptor binding other -1 7930 14373
YP_009320723.1 NC_031901_p52 hypothetical protein phrog_4192 unknown function unknown function -1 41700 41903
YP_009320700.1 NC_031901_p29 DUF1492 domain protein phrog_36 transcriptional regulator transcription regulation -1 29361 29738
YP_009320702.1 NC_031901_p31 hypothetical protein singleton unknown function unknown function -1 30317 30544
YP_009320698.1 NC_031901_p27 terminase large subunit phrog_2 terminase large subunit head and packaging -1 27171 28469
YP_009320672.1 NC_031901_p1 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 535 750