| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031901 |
Definition |
Streptococcus phage phiARI0131-1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
42927 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
39.59 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009320684.1 | NC_031901_p13 | hypothetical protein | phrog_183 | tail chaperone protein | tail | -1 | 18706 | 19086 |
| YP_009320717.1 | NC_031901_p46 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | -1 | 39769 | 40110 |
| YP_009320682.1 | NC_031901_p11 | hypothetical protein | phrog_1194 | unknown function | unknown function | -1 | 14378 | 14728 |
| YP_009320714.1 | NC_031901_p43 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | -1 | 38327 | 38809 |
| YP_009320690.1 | NC_031901_p19 | hypothetical protein | phrog_544 | major head protein | head and packaging | -1 | 21359 | 22204 |
| YP_009320704.1 | NC_031901_p33 | hypothetical protein | phrog_834 | unknown function | unknown function | -1 | 31052 | 31366 |
| YP_009320710.1 | NC_031901_p39 | hypothetical protein | phrog_2486 | unknown function | unknown function | -1 | 35994 | 36308 |
| YP_009320676.1 | NC_031901_p5 | hypothetical protein | phrog_2158 | abortive infection resistance protein | moron, auxiliary metabolic gene and host takeover | 1 | 3013 | 3963 |
| YP_009320696.1 | NC_031901_p25 | minor head protein | phrog_2841 | minor head protein | head and packaging | -1 | 24144 | 25727 |
| YP_009320678.1 | NC_031901_p7 | amidase_2 domain protein | phrog_1110 | endolysin | lysis | -1 | 5675 | 6631 |
| YP_009320675.1 | NC_031901_p4 | HTH_3 domain protein | phrog_4 | transcriptional repressor | transcription regulation | 1 | 2073 | 2864 |
| YP_009320683.1 | NC_031901_p12 | hypothetical protein | phrog_1535 | tail length tape measure protein | tail | -1 | 14737 | 18330 |
| YP_009320679.1 | NC_031901_p8 | holin_LLH domain protein | phrog_608 | holin | lysis | -1 | 6631 | 6966 |
| YP_009320688.1 | NC_031901_p17 | hypothetical protein | phrog_933 | unknown function | unknown function | -1 | 20994 | 21182 |
| YP_009320715.1 | NC_031901_p44 | HNH_3 domain protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 38802 | 39524 |
| YP_009320722.1 | NC_031901_p51 | hypothetical protein | phrog_7728 | unknown function | unknown function | 1 | 41552 | 41743 |
| YP_009320701.1 | NC_031901_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30213 | 30320 |
| YP_009320711.1 | NC_031901_p40 | DEAD domain protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 36327 | 37520 |
| YP_009320712.1 | NC_031901_p41 | hypothetical protein | phrog_1981 | unknown function | unknown function | -1 | 37483 | 37968 |
| YP_009320673.1 | NC_031901_p2 | hypothetical protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 1140 | 1829 |
| YP_009320686.1 | NC_031901_p15 | hypothetical protein | phrog_78 | tail terminator | connector | -1 | 19507 | 19875 |
| YP_009320692.1 | NC_031901_p21 | hypothetical protein | phrog_918 | unknown function | unknown function | -1 | 22982 | 23233 |
| YP_009320716.1 | NC_031901_p45 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | -1 | 39538 | 39768 |
| YP_009320721.1 | NC_031901_p50 | hypothetical protein | phrog_1534 | unknown function | unknown function | -1 | 41123 | 41293 |
| YP_009320697.1 | NC_031901_p26 | hypothetical protein | phrog_64 | portal protein | head and packaging | -1 | 25690 | 27159 |
| YP_009320705.1 | NC_031901_p34 | hypothetical protein | phrog_1489 | unknown function | unknown function | -1 | 31855 | 32007 |
| YP_009320687.1 | NC_031901_p16 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 19872 | 20387 |
| YP_009320718.1 | NC_031901_p47 | hypothetical protein | phrog_5054 | unknown function | unknown function | -1 | 40122 | 40313 |
| YP_009320674.1 | NC_031901_p3 | hypothetical protein | phrog_4488 | unknown function | unknown function | -1 | 1780 | 1911 |
| YP_009320724.1 | NC_031901_p53 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 42374 | 42589 |
| YP_009320695.1 | NC_031901_p24 | hypothetical protein | phrog_3514 | unknown function | unknown function | -1 | 23933 | 24142 |
| YP_009320680.1 | NC_031901_p9 | hypothetical protein | phrog_1137 | unknown function | unknown function | -1 | 7632 | 7835 |
| YP_009320685.1 | NC_031901_p14 | hypothetical protein | phrog_158 | major tail protein | tail | -1 | 19091 | 19504 |
| YP_009320708.1 | NC_031901_p37 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 34641 | 35144 |
| YP_009320694.1 | NC_031901_p23 | metal dependent phosphohydrolase | phrog_990 | metal-dependent phosphohydrolase | other | -1 | 23523 | 23936 |
| YP_009320699.1 | NC_031901_p28 | terminase_2 domain protein | phrog_51 | terminase small subunit | head and packaging | -1 | 28447 | 28926 |
| YP_009320709.1 | NC_031901_p38 | AAA_24 domain protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 35164 | 35991 |
| YP_009320719.1 | NC_031901_p48 | hypothetical protein | phrog_2648 | unknown function | unknown function | -1 | 40310 | 40504 |
| YP_009320693.1 | NC_031901_p22 | hypothetical protein | phrog_419 | unknown function | unknown function | -1 | 23235 | 23480 |
| YP_009320713.1 | NC_031901_p42 | hypothetical protein | phrog_1341 | unknown function | unknown function | -1 | 37968 | 38327 |
| YP_009320691.1 | NC_031901_p20 | DUF4355 domain protein | phrog_172 | head scaffolding protein | head and packaging | -1 | 22210 | 22779 |
| YP_009320689.1 | NC_031901_p18 | hypothetical protein | phrog_2250 | unknown function | unknown function | -1 | 21172 | 21354 |
| YP_009320706.1 | NC_031901_p35 | VirE domain protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 32301 | 33650 |
| YP_009320677.1 | NC_031901_p6 | integrase domain protein | phrog_1 | integrase | integration and excision | 1 | 4242 | 5369 |
| YP_009320703.1 | NC_031901_p32 | DUF1642 domain protein | phrog_121 | unknown function | unknown function | -1 | 30544 | 31050 |
| YP_009320720.1 | NC_031901_p49 | hypothetical protein | phrog_2273 | unknown function | unknown function | -1 | 40501 | 40773 |
| YP_009320707.1 | NC_031901_p36 | Prim-Pol domain protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 33647 | 34468 |
| YP_009320681.1 | NC_031901_p10 | peptidase_S74 domain protein | phrog_1210 | PblB-type receptor binding | other | -1 | 7930 | 14373 |
| YP_009320723.1 | NC_031901_p52 | hypothetical protein | phrog_4192 | unknown function | unknown function | -1 | 41700 | 41903 |
| YP_009320700.1 | NC_031901_p29 | DUF1492 domain protein | phrog_36 | transcriptional regulator | transcription regulation | -1 | 29361 | 29738 |
| YP_009320702.1 | NC_031901_p31 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30317 | 30544 |
| YP_009320698.1 | NC_031901_p27 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 27171 | 28469 |
| YP_009320672.1 | NC_031901_p1 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 535 | 750 |