| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031905 |
Definition |
Flavobacterium phage Fpv7, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
42894 |
Host Name |
Flavobacterium psychrophilum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
32.03 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009321213.1 | NC_031905_p8 | structural protein | phrog_14476 | virion structural protein | head and packaging | 1 | 5444 | 8755 |
| YP_009321216.1 | NC_031905_p11 | hypothetical protein | phrog_12056 | unknown function | unknown function | 1 | 10744 | 13257 |
| YP_009321212.1 | NC_031905_p7 | structural protein | phrog_8914 | virion structural protein | head and packaging | 1 | 4556 | 5308 |
| YP_009321235.1 | NC_031905_p30 | hypothetical protein | phrog_14663 | unknown function | unknown function | 1 | 26332 | 26637 |
| YP_009321231.1 | NC_031905_p26 | hypothetical protein | phrog_2113 | unknown function | unknown function | 1 | 24533 | 25015 |
| YP_009321226.1 | NC_031905_p21 | hypothetical protein | phrog_4763 | unknown function | unknown function | 1 | 21235 | 21948 |
| YP_009321242.1 | NC_031905_p37 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29882 | 30616 |
| YP_009321227.1 | NC_031905_p22 | hypothetical protein | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 21949 | 22746 |
| YP_009321250.1 | NC_031905_p45 | hypothetical protein | phrog_11000 | unknown function | unknown function | 1 | 34247 | 34471 |
| YP_009321210.1 | NC_031905_p5 | hypothetical protein | phrog_8145 | unknown function | unknown function | 1 | 3679 | 4269 |
| YP_009321209.1 | NC_031905_p4 | hypothetical protein | phrog_6195 | tail protein | tail | 1 | 3270 | 3704 |
| YP_009321259.1 | NC_031905_p54 | hypothetical protein | phrog_9957 | unknown function | unknown function | 1 | 38707 | 39078 |
| YP_009321252.1 | NC_031905_p47 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 35125 | 36345 |
| YP_009321234.1 | NC_031905_p29 | hypothetical protein | phrog_7108 | unknown function | unknown function | 1 | 25974 | 26444 |
| YP_009321239.1 | NC_031905_p34 | hypothetical protein | phrog_13960 | unknown function | unknown function | 1 | 28927 | 29244 |
| YP_009321256.1 | NC_031905_p51 | hypothetical protein | phrog_14160 | unknown function | unknown function | 1 | 37707 | 37967 |
| YP_009321232.1 | NC_031905_p27 | hypothetical protein | phrog_5443 | unknown function | unknown function | 1 | 25012 | 25296 |
| YP_009321244.1 | NC_031905_p39 | hypothetical protein | phrog_1365 | unknown function | unknown function | 1 | 31681 | 32034 |
| YP_009321247.1 | NC_031905_p42 | hypothetical protein | phrog_14426 | unknown function | unknown function | 1 | 32980 | 33327 |
| YP_009321251.1 | NC_031905_p46 | DNA packaging protein | phrog_606 | terminase small subunit | head and packaging | 1 | 34636 | 35121 |
| YP_009321206.1 | NC_031905_p1 | hypothetical protein | phrog_7970 | virion structural protein | head and packaging | 1 | 18 | 992 |
| YP_009321229.1 | NC_031905_p24 | hypothetical protein | phrog_4632 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 23754 | 24293 |
| YP_009321255.1 | NC_031905_p50 | hypothetical protein | phrog_13638 | unknown function | unknown function | 1 | 37498 | 37725 |
| YP_009321207.1 | NC_031905_p2 | structural protein | phrog_7231 | virion structural protein | head and packaging | 1 | 1019 | 2068 |
| YP_009321237.1 | NC_031905_p32 | hypothetical protein | phrog_9620 | unknown function | unknown function | 1 | 27113 | 27328 |
| YP_009321219.1 | NC_031905_p14 | hypothetical protein | phrog_12180 | unknown function | unknown function | 1 | 16740 | 17696 |
| YP_009321225.1 | NC_031905_p20 | hypothetical protein | phrog_14584 | unknown function | unknown function | 1 | 20590 | 21165 |
| YP_009321220.1 | NC_031905_p15 | hypothetical protein | phrog_14274 | unknown function | unknown function | 1 | 17713 | 18144 |
| YP_009321249.1 | NC_031905_p44 | hypothetical protein | phrog_12515 | unknown function | unknown function | 1 | 33938 | 34243 |
| YP_009321261.1 | NC_031905_p56 | structural protein | phrog_8193 | major head protein | head and packaging | 1 | 39757 | 40374 |
| YP_009321221.1 | NC_031905_p16 | hypothetical protein | phrog_14595 | unknown function | unknown function | 1 | 18129 | 18782 |
| YP_009321248.1 | NC_031905_p43 | hypothetical protein | phrog_13210 | unknown function | unknown function | 1 | 33330 | 33941 |
| YP_009321258.1 | NC_031905_p53 | hypothetical protein | phrog_13886 | unknown function | unknown function | 1 | 38430 | 38717 |
| YP_009321253.1 | NC_031905_p48 | hypothetical protein | phrog_452 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36354 | 36737 |
| YP_009321208.1 | NC_031905_p3 | hypothetical protein | phrog_8189 | unknown function | unknown function | 1 | 2141 | 3277 |
| YP_009321263.1 | NC_031905_p58 | hypothetical protein | phrog_14563 | unknown function | unknown function | 1 | 42285 | 42875 |
| YP_009321245.1 | NC_031905_p40 | conjugal transfer protein | phrog_799 | DNA methyltransferase | other | 1 | 32015 | 32446 |
| YP_009321230.1 | NC_031905_p25 | hypothetical protein | phrog_13145 | unknown function | unknown function | 1 | 24256 | 24636 |
| YP_009321224.1 | NC_031905_p19 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 20225 | 20479 |
| YP_009321238.1 | NC_031905_p33 | hypothetical protein | phrog_14351 | unknown function | unknown function | 1 | 27331 | 28908 |
| YP_009321222.1 | NC_031905_p17 | hypothetical protein | phrog_1259 | baseplate hub subunit and tail lysozyme | tail | 1 | 18775 | 19311 |
| YP_009321241.1 | NC_031905_p36 | hypothetical protein | phrog_8580 | unknown function | unknown function | 1 | 29440 | 29670 |
| YP_009321214.1 | NC_031905_p9 | hypothetical protein | phrog_12387 | unknown function | unknown function | 1 | 8758 | 10521 |
| YP_009321215.1 | NC_031905_p10 | hypothetical protein | phrog_13115 | unknown function | unknown function | 1 | 10518 | 10751 |
| YP_009321233.1 | NC_031905_p28 | hypothetical protein | phrog_9513 | unknown function | unknown function | 1 | 25322 | 25942 |
| YP_009321228.1 | NC_031905_p23 | hypothetical protein | phrog_14628 | unknown function | unknown function | 1 | 22748 | 23788 |
| YP_009321218.1 | NC_031905_p13 | hypothetical protein | phrog_13374 | unknown function | unknown function | 1 | 14499 | 16736 |
| YP_009321260.1 | NC_031905_p55 | hypothetical protein | phrog_13579 | unknown function | unknown function | 1 | 39152 | 39601 |
| YP_009321262.1 | NC_031905_p57 | hypothetical protein | phrog_7376 | portal protein | head and packaging | 1 | 40551 | 42266 |
| YP_009321257.1 | NC_031905_p52 | hypothetical protein | phrog_13207 | unknown function | unknown function | 1 | 38084 | 38443 |
| YP_009321211.1 | NC_031905_p6 | hypothetical protein | phrog_13297 | unknown function | unknown function | 1 | 4289 | 4552 |
| YP_009321243.1 | NC_031905_p38 | hypothetical protein | phrog_116 | DNA methyltransferase | other | 1 | 30617 | 31684 |
| YP_009321223.1 | NC_031905_p18 | hypothetical protein | phrog_13143 | unknown function | unknown function | 1 | 19301 | 19885 |
| YP_009321236.1 | NC_031905_p31 | hypothetical protein | phrog_4932 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 26642 | 27025 |
| YP_009321254.1 | NC_031905_p49 | hypothetical protein | phrog_13650 | unknown function | unknown function | 1 | 37087 | 37434 |
| YP_009321240.1 | NC_031905_p35 | hypothetical protein | phrog_14020 | unknown function | unknown function | 1 | 29244 | 29492 |
| YP_009321246.1 | NC_031905_p41 | hypothetical protein | phrog_14413 | unknown function | unknown function | 1 | 32637 | 33134 |
| YP_009321217.1 | NC_031905_p12 | hypothetical protein | phrog_12000 | unknown function | unknown function | 1 | 13290 | 14486 |