| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031907 |
Definition |
Streptococcus phage phiARI0746, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
33181 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
42 |
%GC |
39.58 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009321514.1 | NC_031907_p11 | hypothetical protein | phrog_918 | unknown function | unknown function | -1 | 10935 | 11186 |
| YP_009321516.1 | NC_031907_p13 | hypothetical protein | phrog_3755 | unknown function | unknown function | -1 | 11596 | 11769 |
| YP_009321513.1 | NC_031907_p10 | DUF4355 domain protein | phrog_172 | head scaffolding protein | head and packaging | -1 | 10124 | 10708 |
| YP_009321545.1 | NC_031907_p42 | integrase domain protein | phrog_1 | integrase | integration and excision | 1 | 31967 | 33094 |
| YP_009321544.1 | NC_031907_p41 | secreted protein | phrog_5214 | unknown function | unknown function | 1 | 31334 | 31849 |
| YP_009321517.1 | NC_031907_p14 | HD_4 domain protein | phrog_990 | metal-dependent phosphohydrolase | other | -1 | 11811 | 12224 |
| YP_009321505.1 | NC_031907_p2 | hypothetical protein | phrog_1535 | tail length tape measure protein | tail | -1 | 2591 | 6244 |
| YP_009321535.1 | NC_031907_p32 | hypothetical protein | phrog_10455 | unknown function | unknown function | -1 | 26214 | 26540 |
| YP_009321519.1 | NC_031907_p16 | hypothetical protein | phrog_2841 | minor head protein | head and packaging | -1 | 12432 | 14015 |
| YP_009321540.1 | NC_031907_p37 | AntA domain protein | phrog_63 | anti-repressor Ant | transcription regulation | -1 | 29346 | 30053 |
| YP_009321520.1 | NC_031907_p17 | hypothetical protein | phrog_64 | portal protein | head and packaging | -1 | 13978 | 15447 |
| YP_009321534.1 | NC_031907_p31 | DUF1351 domain protein | phrog_674 | unknown function | unknown function | -1 | 25209 | 26201 |
| YP_009321527.1 | NC_031907_p24 | hypothetical protein | phrog_774 | unknown function | unknown function | -1 | 21599 | 21811 |
| YP_009321507.1 | NC_031907_p4 | tail_3 domain protein | phrog_158 | major tail protein | tail | -1 | 7005 | 7418 |
| YP_009321531.1 | NC_031907_p28 | DNA_methylase domain protein | phrog_116 | DNA methyltransferase | other | -1 | 23293 | 24450 |
| YP_009321512.1 | NC_031907_p9 | hypothetical protein | phrog_544 | major head protein | head and packaging | -1 | 9273 | 10118 |
| YP_009321511.1 | NC_031907_p8 | hypothetical protein | phrog_2250 | unknown function | unknown function | -1 | 9086 | 9268 |
| YP_009321518.1 | NC_031907_p15 | hypothetical protein | phrog_3514 | unknown function | unknown function | -1 | 12221 | 12430 |
| YP_009321537.1 | NC_031907_p34 | hypothetical protein | phrog_2715 | unknown function | unknown function | -1 | 27245 | 27592 |
| YP_009321528.1 | NC_031907_p25 | hypothetical protein | phrog_1029 | unknown function | unknown function | -1 | 21828 | 22565 |
| YP_009321508.1 | NC_031907_p5 | hypothetical protein | phrog_78 | tail terminator | connector | -1 | 7421 | 7789 |
| YP_009321536.1 | NC_031907_p33 | ERF domain protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 26544 | 27239 |
| YP_009321533.1 | NC_031907_p30 | hypothetical protein | phrog_4139 | unknown function | unknown function | -1 | 25011 | 25187 |
| YP_009321541.1 | NC_031907_p38 | repressor protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30064 | 30255 |
| YP_009321530.1 | NC_031907_p27 | hypothetical protein | phrog_3947 | unknown function | unknown function | -1 | 23055 | 23258 |
| YP_009321538.1 | NC_031907_p35 | HTH_19 domain protein | phrog_13947 | unknown function | unknown function | -1 | 27644 | 28315 |
| YP_009321526.1 | NC_031907_p23 | rusA domain protein | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21178 | 21588 |
| YP_009321515.1 | NC_031907_p12 | hypothetical protein | phrog_419 | unknown function | unknown function | -1 | 11188 | 11451 |
| YP_009321509.1 | NC_031907_p6 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 7786 | 8301 |
| YP_009321523.1 | NC_031907_p20 | DUF1492 domain protein | phrog_36 | transcriptional regulator | transcription regulation | -1 | 18551 | 18982 |
| YP_009321525.1 | NC_031907_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20853 | 21185 |
| YP_009321504.1 | NC_031907_p1 | hypothetical protein | phrog_1194 | unknown function | unknown function | -1 | 2232 | 2582 |
| YP_009321543.1 | NC_031907_p40 | DUF955 domain protein | phrog_87 | metallo-protease | other | 1 | 30936 | 31316 |
| YP_009321521.1 | NC_031907_p18 | terminase_3 domain protein | phrog_2 | terminase large subunit | head and packaging | -1 | 15459 | 16757 |
| YP_009321529.1 | NC_031907_p26 | hypothetical protein | phrog_997 | replication terminator | DNA, RNA and nucleotide metabolism | -1 | 22567 | 23001 |
| YP_009321510.1 | NC_031907_p7 | hypothetical protein | phrog_933 | unknown function | unknown function | -1 | 8908 | 9096 |
| YP_009321532.1 | NC_031907_p29 | SSB domain protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24476 | 25021 |
| YP_009321506.1 | NC_031907_p3 | hypothetical protein | phrog_183 | tail chaperone protein | tail | -1 | 6620 | 7000 |
| YP_009321539.1 | NC_031907_p36 | hypothetical protein | phrog_2273 | unknown function | unknown function | -1 | 28396 | 28662 |
| YP_009321524.1 | NC_031907_p21 | YopX domain protein | phrog_98 | unknown function | unknown function | -1 | 19733 | 20155 |
| YP_009321542.1 | NC_031907_p39 | repressor protein | phrog_8 | transcriptional regulator | transcription regulation | 1 | 30552 | 30914 |
| YP_009321522.1 | NC_031907_p19 | terminase_2 domain protein | phrog_51 | terminase small subunit | head and packaging | -1 | 16735 | 17112 |