| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031911 |
Definition |
Flavobacterium phage 1H, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Unahavirus; Flavobacterium virus 1H. |
DB of origin |
REFSEQ |
Length |
39290 |
Host Name |
Flavobacterium psychrophilum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
48 |
%GC |
31.44 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009321855.1 | NC_031911_p34 | hypothetical protein | phrog_21888 | unknown function | unknown function | -1 | 28079 | 28615 |
| YP_009321836.1 | NC_031911_p15 | hypothetical protein | phrog_20504 | unknown function | unknown function | -1 | 14933 | 15571 |
| YP_009321823.1 | NC_031911_p2 | hypothetical protein | phrog_19879 | unknown function | unknown function | -1 | 559 | 2475 |
| YP_009321863.1 | NC_031911_p42 | hypothetical protein | phrog_20837 | unknown function | unknown function | -1 | 32108 | 32335 |
| YP_009321847.1 | NC_031911_p26 | hypothetical protein | phrog_20363 | unknown function | unknown function | -1 | 21722 | 22234 |
| YP_009321822.1 | NC_031911_p1 | integrase | phrog_216 | integrase | integration and excision | 1 | 29 | 562 |
| YP_009321841.1 | NC_031911_p20 | transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | -1 | 17953 | 18201 |
| YP_009321830.1 | NC_031911_p9 | hypothetical protein | phrog_20846 | unknown function | unknown function | -1 | 10592 | 10819 |
| YP_009321860.1 | NC_031911_p39 | hypothetical protein | phrog_19552 | unknown function | unknown function | -1 | 30487 | 30699 |
| YP_009321857.1 | NC_031911_p36 | hypothetical protein | phrog_27752 | unknown function | unknown function | -1 | 29179 | 29835 |
| YP_009321831.1 | NC_031911_p10 | hypothetical protein | phrog_19224 | unknown function | unknown function | 1 | 11446 | 11853 |
| YP_009321862.1 | NC_031911_p41 | hypothetical protein | phrog_26174 | unknown function | unknown function | -1 | 31307 | 31744 |
| YP_009321869.1 | NC_031911_p48 | hypothetical protein | phrog_21356 | unknown function | unknown function | 1 | 38182 | 38493 |
| YP_009321824.1 | NC_031911_p3 | hypothetical protein | phrog_19217 | unknown function | unknown function | -1 | 2453 | 4153 |
| YP_009321844.1 | NC_031911_p23 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 19917 | 21116 |
| YP_009321851.1 | NC_031911_p30 | N-acetylmuramoyl-L-alanine amidase | phrog_19472 | unknown function | unknown function | -1 | 26409 | 26963 |
| YP_009321832.1 | NC_031911_p11 | hypothetical protein | phrog_21262 | unknown function | unknown function | 1 | 11918 | 12148 |
| YP_009321868.1 | NC_031911_p47 | hypothetical protein | phrog_18835 | unknown function | unknown function | -1 | 37785 | 38060 |
| YP_009321849.1 | NC_031911_p28 | hypothetical protein | phrog_21862 | unknown function | unknown function | -1 | 23256 | 25433 |
| YP_009321864.1 | NC_031911_p43 | hypothetical protein | phrog_21169 | unknown function | unknown function | -1 | 32336 | 32866 |
| YP_009321833.1 | NC_031911_p12 | hypothetical protein | phrog_20906 | unknown function | unknown function | 1 | 12132 | 12317 |
| YP_009321839.1 | NC_031911_p18 | hypothetical protein | phrog_21662 | unknown function | unknown function | -1 | 16640 | 17506 |
| YP_009321850.1 | NC_031911_p29 | protease | phrog_53 | head maturation protease | head and packaging | -1 | 25464 | 26348 |
| YP_009321835.1 | NC_031911_p14 | hypothetical protein | phrog_2 | terminase large subunit | head and packaging | -1 | 13258 | 14967 |
| YP_009321834.1 | NC_031911_p13 | hypothetical protein | phrog_21518 | unknown function | unknown function | 1 | 12321 | 13178 |
| YP_009321837.1 | NC_031911_p16 | hypothetical protein | phrog_20317 | unknown function | unknown function | -1 | 15561 | 15893 |
| YP_009321858.1 | NC_031911_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29838 | 30119 |
| YP_009321827.1 | NC_031911_p6 | hypothetical protein | phrog_38077 | unknown function | unknown function | -1 | 8970 | 9521 |
| YP_009321842.1 | NC_031911_p21 | IbrA protein | phrog_2302 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | -1 | 18205 | 19344 |
| YP_009321866.1 | NC_031911_p45 | hypothetical protein | phrog_19103 | unknown function | unknown function | -1 | 36865 | 37101 |
| YP_009321825.1 | NC_031911_p4 | structural protein | phrog_25337 | tail length tape measure protein | tail | -1 | 4157 | 8527 |
| YP_009321848.1 | NC_031911_p27 | hypothetical protein | phrog_19897 | unknown function | unknown function | -1 | 22404 | 23240 |
| YP_009321840.1 | NC_031911_p19 | hypothetical protein | phrog_18499 | unknown function | unknown function | -1 | 17634 | 17966 |
| YP_009321856.1 | NC_031911_p35 | hypothetical protein | phrog_10362 | unknown function | unknown function | -1 | 28626 | 29177 |
| YP_009321852.1 | NC_031911_p31 | hypothetical protein | phrog_21433 | endolysin; inhibits RNA polymerase | lysis | -1 | 26965 | 27489 |
| YP_009321846.1 | NC_031911_p25 | hypothetical protein | phrog_5809 | unknown function | unknown function | -1 | 21399 | 21722 |
| YP_009321867.1 | NC_031911_p46 | transcriptional regulator | phrog_10300 | transcriptional regulator | transcription regulation | -1 | 37217 | 37774 |
| YP_009321865.1 | NC_031911_p44 | hypothetical protein | phrog_22657 | unknown function | unknown function | -1 | 33308 | 36865 |
| YP_009321826.1 | NC_031911_p5 | hypothetical protein | singleton | unknown function | unknown function | -1 | 8575 | 8922 |
| YP_009321854.1 | NC_031911_p33 | hypothetical protein | phrog_18908 | unknown function | unknown function | -1 | 27701 | 28018 |
| YP_009321853.1 | NC_031911_p32 | hypothetical protein | phrog_20025 | unknown function | unknown function | -1 | 27486 | 27704 |
| YP_009321843.1 | NC_031911_p22 | hypothetical protein | phrog_2159 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 19347 | 19895 |
| YP_009321845.1 | NC_031911_p24 | hypothetical protein | phrog_20788 | unknown function | unknown function | -1 | 21109 | 21402 |
| YP_009321838.1 | NC_031911_p17 | hypothetical protein | phrog_20533 | unknown function | unknown function | -1 | 16057 | 16665 |
| YP_009321828.1 | NC_031911_p7 | hypothetical protein | phrog_33690 | unknown function | unknown function | -1 | 9367 | 9675 |
| YP_009321859.1 | NC_031911_p38 | hypothetical protein | phrog_27194 | unknown function | unknown function | -1 | 30131 | 30400 |
| YP_009321829.1 | NC_031911_p8 | hypothetical protein | phrog_4002 | unknown function | unknown function | -1 | 10041 | 10595 |
| YP_009321861.1 | NC_031911_p40 | hypothetical protein | phrog_38446 | unknown function | unknown function | -1 | 30853 | 31131 |