Genomic map of Flavobacterium phage 1H (NC_031911)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031911
Definition
Flavobacterium phage 1H, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Unahavirus; Flavobacterium virus 1H.
DB of origin
REFSEQ
Length
39290
Host Name
Flavobacterium psychrophilum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
31.44
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009321855.1 NC_031911_p34 hypothetical protein phrog_21888 unknown function unknown function -1 28079 28615
YP_009321836.1 NC_031911_p15 hypothetical protein phrog_20504 unknown function unknown function -1 14933 15571
YP_009321823.1 NC_031911_p2 hypothetical protein phrog_19879 unknown function unknown function -1 559 2475
YP_009321863.1 NC_031911_p42 hypothetical protein phrog_20837 unknown function unknown function -1 32108 32335
YP_009321847.1 NC_031911_p26 hypothetical protein phrog_20363 unknown function unknown function -1 21722 22234
YP_009321822.1 NC_031911_p1 integrase phrog_216 integrase integration and excision 1 29 562
YP_009321841.1 NC_031911_p20 transcriptional regulator phrog_3 transcriptional repressor transcription regulation -1 17953 18201
YP_009321830.1 NC_031911_p9 hypothetical protein phrog_20846 unknown function unknown function -1 10592 10819
YP_009321860.1 NC_031911_p39 hypothetical protein phrog_19552 unknown function unknown function -1 30487 30699
YP_009321857.1 NC_031911_p36 hypothetical protein phrog_27752 unknown function unknown function -1 29179 29835
YP_009321831.1 NC_031911_p10 hypothetical protein phrog_19224 unknown function unknown function 1 11446 11853
YP_009321862.1 NC_031911_p41 hypothetical protein phrog_26174 unknown function unknown function -1 31307 31744
YP_009321869.1 NC_031911_p48 hypothetical protein phrog_21356 unknown function unknown function 1 38182 38493
YP_009321824.1 NC_031911_p3 hypothetical protein phrog_19217 unknown function unknown function -1 2453 4153
YP_009321844.1 NC_031911_p23 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 19917 21116
YP_009321851.1 NC_031911_p30 N-acetylmuramoyl-L-alanine amidase phrog_19472 unknown function unknown function -1 26409 26963
YP_009321832.1 NC_031911_p11 hypothetical protein phrog_21262 unknown function unknown function 1 11918 12148
YP_009321868.1 NC_031911_p47 hypothetical protein phrog_18835 unknown function unknown function -1 37785 38060
YP_009321849.1 NC_031911_p28 hypothetical protein phrog_21862 unknown function unknown function -1 23256 25433
YP_009321864.1 NC_031911_p43 hypothetical protein phrog_21169 unknown function unknown function -1 32336 32866
YP_009321833.1 NC_031911_p12 hypothetical protein phrog_20906 unknown function unknown function 1 12132 12317
YP_009321839.1 NC_031911_p18 hypothetical protein phrog_21662 unknown function unknown function -1 16640 17506
YP_009321850.1 NC_031911_p29 protease phrog_53 head maturation protease head and packaging -1 25464 26348
YP_009321835.1 NC_031911_p14 hypothetical protein phrog_2 terminase large subunit head and packaging -1 13258 14967
YP_009321834.1 NC_031911_p13 hypothetical protein phrog_21518 unknown function unknown function 1 12321 13178
YP_009321837.1 NC_031911_p16 hypothetical protein phrog_20317 unknown function unknown function -1 15561 15893
YP_009321858.1 NC_031911_p37 hypothetical protein singleton unknown function unknown function -1 29838 30119
YP_009321827.1 NC_031911_p6 hypothetical protein phrog_38077 unknown function unknown function -1 8970 9521
YP_009321842.1 NC_031911_p21 IbrA protein phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover -1 18205 19344
YP_009321866.1 NC_031911_p45 hypothetical protein phrog_19103 unknown function unknown function -1 36865 37101
YP_009321825.1 NC_031911_p4 structural protein phrog_25337 tail length tape measure protein tail -1 4157 8527
YP_009321848.1 NC_031911_p27 hypothetical protein phrog_19897 unknown function unknown function -1 22404 23240
YP_009321840.1 NC_031911_p19 hypothetical protein phrog_18499 unknown function unknown function -1 17634 17966
YP_009321856.1 NC_031911_p35 hypothetical protein phrog_10362 unknown function unknown function -1 28626 29177
YP_009321852.1 NC_031911_p31 hypothetical protein phrog_21433 endolysin; inhibits RNA polymerase lysis -1 26965 27489
YP_009321846.1 NC_031911_p25 hypothetical protein phrog_5809 unknown function unknown function -1 21399 21722
YP_009321867.1 NC_031911_p46 transcriptional regulator phrog_10300 transcriptional regulator transcription regulation -1 37217 37774
YP_009321865.1 NC_031911_p44 hypothetical protein phrog_22657 unknown function unknown function -1 33308 36865
YP_009321826.1 NC_031911_p5 hypothetical protein singleton unknown function unknown function -1 8575 8922
YP_009321854.1 NC_031911_p33 hypothetical protein phrog_18908 unknown function unknown function -1 27701 28018
YP_009321853.1 NC_031911_p32 hypothetical protein phrog_20025 unknown function unknown function -1 27486 27704
YP_009321843.1 NC_031911_p22 hypothetical protein phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism -1 19347 19895
YP_009321845.1 NC_031911_p24 hypothetical protein phrog_20788 unknown function unknown function -1 21109 21402
YP_009321838.1 NC_031911_p17 hypothetical protein phrog_20533 unknown function unknown function -1 16057 16665
YP_009321828.1 NC_031911_p7 hypothetical protein phrog_33690 unknown function unknown function -1 9367 9675
YP_009321859.1 NC_031911_p38 hypothetical protein phrog_27194 unknown function unknown function -1 30131 30400
YP_009321829.1 NC_031911_p8 hypothetical protein phrog_4002 unknown function unknown function -1 10041 10595
YP_009321861.1 NC_031911_p40 hypothetical protein phrog_38446 unknown function unknown function -1 30853 31131