| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031913 |
Definition |
Streptococcus phage phiARI0460-1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
41807 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
39.68 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009321996.1 | NC_031913_p45 | HTH_3 domain protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 36252 | 36467 |
| YP_009321955.1 | NC_031913_p4 | hypothetical protein | phrog_1164 | unknown function | unknown function | -1 | 1840 | 2190 |
| YP_009321984.1 | NC_031913_p33 | DUF669 domain protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 29309 | 29812 |
| YP_009321961.1 | NC_031913_p10 | hypothetical protein | phrog_2066 | unknown function | unknown function | -1 | 12800 | 13150 |
| YP_009321968.1 | NC_031913_p17 | DUF4355 domain protein | phrog_172 | head scaffolding protein | head and packaging | -1 | 16723 | 17247 |
| YP_009321982.1 | NC_031913_p31 | VirE domain protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 26969 | 28312 |
| YP_009321992.1 | NC_031913_p41 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | -1 | 34437 | 34778 |
| YP_009321965.1 | NC_031913_p14 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 14355 | 14870 |
| YP_009321959.1 | NC_031913_p8 | hypothetical protein | phrog_1194 | unknown function | unknown function | -1 | 8801 | 9151 |
| YP_009321952.1 | NC_031913_p1 | amidase_2 domain protein | phrog_1110 | endolysin | lysis | -1 | 113 | 1069 |
| YP_009321990.1 | NC_031913_p39 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | -1 | 32995 | 33477 |
| YP_009321960.1 | NC_031913_p9 | hypothetical protein | phrog_1535 | tail length tape measure protein | tail | -1 | 9160 | 12813 |
| YP_009321954.1 | NC_031913_p3 | holin_4 domain protein | phrog_199 | holin | lysis | -1 | 1414 | 1830 |
| YP_009321981.1 | NC_031913_p30 | hypothetical protein | phrog_834 | unknown function | unknown function | -1 | 25720 | 26034 |
| YP_009321980.1 | NC_031913_p29 | DUF1642 domain protein | phrog_121 | unknown function | unknown function | -1 | 25215 | 25718 |
| YP_009321999.1 | NC_031913_p48 | hypothetical protein | phrog_4488 | unknown function | unknown function | -1 | 37861 | 37992 |
| YP_009321966.1 | NC_031913_p15 | hypothetical protein | phrog_933 | unknown function | unknown function | -1 | 15477 | 15665 |
| YP_009321994.1 | NC_031913_p43 | hypothetical protein | phrog_2273 | unknown function | unknown function | -1 | 35169 | 35441 |
| YP_009321974.1 | NC_031913_p23 | minor head protein | phrog_2841 | minor head protein | head and packaging | -1 | 18721 | 20304 |
| YP_009321979.1 | NC_031913_p28 | hypothetical protein | phrog_3476 | unknown function | unknown function | -1 | 24465 | 24836 |
| YP_009321964.1 | NC_031913_p13 | DUF3168 domain protein | phrog_78 | tail terminator | connector | -1 | 13990 | 14358 |
| YP_009321957.1 | NC_031913_p6 | peptidase_S74 domain protein | phrog_1330 | tail protein | tail | -1 | 2490 | 5786 |
| YP_009321987.1 | NC_031913_p36 | ResIII domain protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 30995 | 32188 |
| YP_009321983.1 | NC_031913_p32 | Prim-Pol domain protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 28315 | 29136 |
| YP_009321993.1 | NC_031913_p42 | hypothetical protein | phrog_2648 | unknown function | unknown function | -1 | 34978 | 35172 |
| YP_009321976.1 | NC_031913_p25 | terminase_3 domain protein | phrog_2 | terminase large subunit | head and packaging | -1 | 21748 | 23046 |
| YP_009321991.1 | NC_031913_p40 | HNH_3 domain protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 33470 | 34192 |
| YP_009322001.1 | NC_031913_p50 | hypothetical protein | phrog_10226 | unknown function | unknown function | 1 | 38961 | 40031 |
| YP_009321989.1 | NC_031913_p38 | hypothetical protein | phrog_1341 | unknown function | unknown function | -1 | 32636 | 32995 |
| YP_009321978.1 | NC_031913_p27 | DUF1492 domain protein | phrog_36 | transcriptional regulator | transcription regulation | -1 | 23991 | 24350 |
| YP_009321986.1 | NC_031913_p35 | hypothetical protein | phrog_2486 | unknown function | unknown function | -1 | 30659 | 30976 |
| YP_009321969.1 | NC_031913_p18 | hypothetical protein | phrog_774 | unknown function | unknown function | -1 | 17417 | 17629 |
| YP_009321971.1 | NC_031913_p20 | hypothetical protein | phrog_14725 | unknown function | unknown function | -1 | 17770 | 18057 |
| YP_009321958.1 | NC_031913_p7 | hypothetical protein | phrog_1210 | PblB-type receptor binding | other | -1 | 5770 | 8796 |
| YP_009321970.1 | NC_031913_p19 | hypothetical protein | phrog_5469 | unknown function | unknown function | -1 | 17584 | 17748 |
| YP_009321972.1 | NC_031913_p21 | metal dependent phosphohydrolase | phrog_990 | metal-dependent phosphohydrolase | other | -1 | 18100 | 18513 |
| YP_009321962.1 | NC_031913_p11 | hypothetical protein | phrog_183 | tail chaperone protein | tail | -1 | 13189 | 13569 |
| YP_009321967.1 | NC_031913_p16 | CBM_5_12 domain protein | phrog_422 | major head protein | head and packaging | -1 | 15675 | 16700 |
| YP_009321995.1 | NC_031913_p44 | hypothetical protein | phrog_14618 | unknown function | unknown function | -1 | 35684 | 36220 |
| YP_009321998.1 | NC_031913_p47 | DUF4145 domain protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 37221 | 37910 |
| YP_009321953.1 | NC_031913_p2 | holin_LLH domain protein | phrog_608 | holin | lysis | -1 | 1078 | 1410 |
| YP_009321975.1 | NC_031913_p24 | hypothetical protein | phrog_64 | portal protein | head and packaging | -1 | 20267 | 21736 |
| YP_009321997.1 | NC_031913_p46 | hypothetical protein | phrog_7728 | unknown function | unknown function | 1 | 36813 | 37004 |
| YP_009321956.1 | NC_031913_p5 | hypothetical protein | phrog_1137 | unknown function | unknown function | -1 | 2193 | 2396 |
| YP_009321977.1 | NC_031913_p26 | terminase_2 domain protein | phrog_51 | terminase small subunit | head and packaging | -1 | 23024 | 23401 |
| YP_009322000.1 | NC_031913_p49 | HTH_3 domain protein | phrog_4 | transcriptional repressor | transcription regulation | 1 | 38154 | 38939 |
| YP_009321988.1 | NC_031913_p37 | hypothetical protein | phrog_1981 | unknown function | unknown function | -1 | 32151 | 32636 |
| YP_009321973.1 | NC_031913_p22 | hypothetical protein | phrog_3514 | unknown function | unknown function | -1 | 18510 | 18719 |
| YP_009322002.1 | NC_031913_p51 | integrase domain protein | phrog_1 | integrase | integration and excision | 1 | 40401 | 41528 |
| YP_009321963.1 | NC_031913_p12 | tail_3 domain protein | phrog_158 | major tail protein | tail | -1 | 13574 | 13987 |
| YP_009321985.1 | NC_031913_p34 | AAA_24 domain protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 29832 | 30659 |