Genomic map of Streptococcus phage phiARI0468-4 (NC_031915)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031915
Definition
Streptococcus phage phiARI0468-4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
37395
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
38.13
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009322122.1 NC_031915_p40 ERF domain protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 30725 31423
YP_009322126.1 NC_031915_p44 hypothetical protein phrog_5868 unknown function unknown function -1 33073 33339
YP_009322112.1 NC_031915_p30 hypothetical protein phrog_4706 unknown function unknown function -1 26095 26301
YP_009322118.1 NC_031915_p36 SSB domain protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 28657 29202
YP_009322085.1 NC_031915_p3 DUF859 domain protein phrog_372 tail protein tail -1 875 2953
YP_009322120.1 NC_031915_p38 DUF1351 domain protein phrog_674 unknown function unknown function -1 29390 30382
YP_009322109.1 NC_031915_p27 hypothetical protein phrog_2003 unknown function unknown function -1 24928 25221
YP_009322091.1 NC_031915_p9 hypothetical protein phrog_820 major tail protein tail -1 13256 13705
YP_009322115.1 NC_031915_p33 hypothetical protein singleton unknown function unknown function -1 26944 27267
YP_009322131.1 NC_031915_p49 integrase domain protein phrog_1 integrase integration and excision 1 36181 37308
YP_009322105.1 NC_031915_p23 hypothetical protein phrog_2412 unknown function unknown function -1 21990 22445
YP_009322102.1 NC_031915_p20 hypothetical protein phrog_419 unknown function unknown function -1 18874 19122
YP_009322113.1 NC_031915_p31 rusA domain protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 26303 26704
YP_009322108.1 NC_031915_p26 hypothetical protein phrog_3511 unknown function unknown function -1 24536 24928
YP_009322086.1 NC_031915_p4 collagen domain protein phrog_588 tail fiber protein and host specificity tail -1 2964 7334
YP_009322116.1 NC_031915_p34 hypothetical protein phrog_3947 unknown function unknown function -1 27358 27561
YP_009322103.1 NC_031915_p21 hypothetical protein phrog_533 portal protein head and packaging -1 19109 20677
YP_009322088.1 NC_031915_p6 hypothetical protein phrog_1686 tail length tape measure protein tail -1 8847 12128
YP_009322107.1 NC_031915_p25 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism -1 23376 24464
YP_009322100.1 NC_031915_p18 hypothetical protein phrog_3755 unknown function unknown function -1 18288 18461
YP_009322096.1 NC_031915_p14 hypothetical protein phrog_2910 unknown function unknown function -1 15249 15482
YP_009322111.1 NC_031915_p29 hypothetical protein phrog_834 unknown function unknown function -1 25729 26046
YP_009322098.1 NC_031915_p16 hypothetical protein phrog_194 head scaffolding protein head and packaging -1 16392 16955
YP_009322095.1 NC_031915_p13 hypothetical protein phrog_541 head-tail adaptor connector -1 14814 15206
YP_009322117.1 NC_031915_p35 hypothetical protein phrog_2882 DNA methyltransferase other -1 27548 28357
YP_009322084.1 NC_031915_p2 hypothetical protein phrog_2566 unknown function unknown function -1 552 815
YP_009322127.1 NC_031915_p45 antirepressor protein phrog_63 anti-repressor Ant transcription regulation -1 33404 34111
YP_009322104.1 NC_031915_p22 terminase phrog_2 terminase large subunit head and packaging -1 20690 22000
YP_009322128.1 NC_031915_p46 HTH_19 domain protein phrog_8 transcriptional regulator transcription regulation 1 34929 35294
YP_009322130.1 NC_031915_p48 hypothetical protein phrog_9859 unknown function unknown function 1 35710 36060
YP_009322093.1 NC_031915_p11 minor_capsid_2 domain protein phrog_556 minor head protein head and packaging -1 14109 14453
YP_009322101.1 NC_031915_p19 hypothetical protein phrog_3392 unknown function unknown function -1 18476 18871
YP_009322092.1 NC_031915_p10 capsid protein phrog_913 minor head protein head and packaging -1 13702 14109
YP_009322090.1 NC_031915_p8 hypothetical protein phrog_1061 unknown function unknown function -1 12703 13191
YP_009322125.1 NC_031915_p43 hypothetical protein phrog_9136 unknown function unknown function 1 32908 33144
YP_009322097.1 NC_031915_p15 hypothetical protein phrog_840 major head protein head and packaging -1 15493 16374
YP_009322089.1 NC_031915_p7 hypothetical protein phrog_706 unknown function unknown function -1 12121 12690
YP_009322129.1 NC_031915_p47 hypothetical protein phrog_87 metallo-protease other 1 35316 35696
YP_009322087.1 NC_031915_p5 tail domain protein phrog_202 distal tail protein Dit tail -1 7336 8850
YP_009322119.1 NC_031915_p37 hypothetical protein phrog_4139 unknown function unknown function -1 29192 29368
YP_009322124.1 NC_031915_p42 hypothetical protein phrog_2273 unknown function unknown function -1 31964 32230
YP_009322099.1 NC_031915_p17 min_cap2 domain protein phrog_581 minor head protein head and packaging -1 17094 18245
YP_009322083.1 NC_031915_p1 holin_4 domain protein phrog_199 holin lysis -1 126 542
YP_009322094.1 NC_031915_p12 capsid protein phrog_793 head-tail adaptor connector -1 14453 14824
YP_009322106.1 NC_031915_p24 hypothetical protein phrog_5057 unknown function unknown function -1 22649 23395
YP_009322123.1 NC_031915_p41 hypothetical protein phrog_2715 unknown function unknown function -1 31429 31881
YP_009322121.1 NC_031915_p39 hypothetical protein phrog_10455 unknown function unknown function -1 30395 30721
YP_009322114.1 NC_031915_p32 hypothetical protein phrog_774 unknown function unknown function -1 26715 26927
YP_009322110.1 NC_031915_p28 DUF1642 domain protein phrog_121 unknown function unknown function -1 25221 25727